implementing the FLC

[tobykovacs796]

PCG4.BEAST2FLC.pdf

Hi Mathieu,

Would you be able to help me implement your FLC package. I have successfully run it through BEAST but the output tree is suggesting I've done something wrong. I'm trying to set one rate across the whole tree except for one clade which has a much higher rate of evolution (labelled in red). Instead its giving me lots of short terminal branches and very long branches closer to the root. It seems as if it is giving me two rates, one for terminal branches and one closer to the root. Can you let me know if you can think of anything that would help. I've emailed you my XML file.

Cheers,
Toby