R-CMD-check.yaml

on:
  push:
    branches:
      - master
  pull_request:
    branches:
      - master
  workflow_dispatch:

name: R-CMD-check

jobs:
  R-CMD-check:
    runs-on: ${{ matrix.config.os }}

    name: ${{ matrix.config.os }} (${{ matrix.config.r }})

    strategy:
      fail-fast: false
      matrix:
        config:
          - {os: windows-latest, r: 'release'}
          - {os: macOS-latest, r: 'release'}
          - {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}

    env:
      R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
      RSPM: ${{ matrix.config.rspm }}

    steps:
      - uses: actions/checkout@v4

      - name: Uninstall RTools44
        if: runner.os == 'Windows'
        run: |
          choco uninstall rtools -y
          
      - uses: r-lib/actions/setup-r@v2
        with:
          r-version: ${{ matrix.config.r }}
          rtools-version: '43'
          
      - name: Set path for rtoools43 on Windows
        if: runner.os == 'Windows'
        run: |
          echo "C:\\rtools43\\usr\\bin;C:\\rtools43\\bin" >> $GITHUB_PATH
          echo "BINPREF=C:\\rtools43\\mingw_64\\bin\\" >> $GITHUB_ENV
          echo "RTOOLS=C:\\rtools43" >> $GITHUB_ENV
          echo "RTOOLS43=1" >> $GITHUB_ENV

      - name: Verify RTools version on Windows
        if: runner.os == 'Windows'
        run: |
          system('gcc --version')
        shell: Rscript {0}

      - uses: r-lib/actions/setup-pandoc@v2

      - name: Query dependencies
        run: |
          install.packages('remotes')
          saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
          writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
        shell: Rscript {0}

      - name: Cache R packages
        if: runner.os != 'Windows'
        uses: actions/cache@v4
        with:
          path: ${{ env.R_LIBS_USER }}
          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

      - name: Install system dependencies
        if: runner.os == 'Linux'
        run: |
          # Add the appropriate commands to install system dependencies here
          echo "Linux setup"
        env:
          RHUB_PLATFORM: linux-x86_64-ubuntu-gcc

      - name: Install dependencies
        run: |
          remotes::install_deps(dependencies = TRUE)
          remotes::install_cran("rcmdcheck")
        shell: Rscript {0}

      - name: Check
        env:
          _R_CHECK_CRAN_INCOMING_REMOTE_: false
        run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
        shell: Rscript {0}

      - name: Upload check results
        if: failure()
        uses: actions/upload-artifact@v4
        with:
          name: ${{ runner.os }}-r${{ matrix.config.r }}-results
          path: check