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Css Function selection #112

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wants to merge 37 commits into from
Closed

Css Function selection #112

wants to merge 37 commits into from

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sevisal
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@sevisal sevisal commented Sep 22, 2023

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sevisal and others added 30 commits June 21, 2023 12:03
* Reupload integral plugin

* argopt plugin

* Css user interaction for Bayesian Optimisation (#91)

* Display for less than 3 parameters

* Added current selection

* DoubleClick for editing

* Change plugin readable name

In order to avoid confusions with the Optimisation plugin, changed naming to indicate it referes to the ui.

* Added icon to GUI window

* Fix more than 2 variables error

* Minor aesthetic changes

* Css bayesian optimisation (#98)

* added re-attempt of env and pybullet

* ongoing pybullet/arg population changes

* added pybullet stubs

* added credit to stubs

* added gui/headless choice function

* added environment module tag to XML parser

* added pybullet config file

* renamed Environment module to remove plural

* added types and ABC for env modules

* removed renamed scripts

* modified run pipeline for pybullet

* moved relative to absolute converter to import helper

* added half-cheetah model

* pybullet loading and running working

* added half cheetah example with mass

* added option to set gravity

* removed requirement for data

* removed data loading for pybullet example script

* added __getattr__ function to access all pybullet methods from ENV class

* added option parsing

* Change progressTracker to treeview

* Correct icon

* WIP: editing option parsing

* option mods - not yet working

* arg passing without kwords to pybul from xml

* cleaned imports

* renamed depreciated setup file

* removed old setup file

* cleaned up main __init__ file

* added matplotlib to pyproject.toml

* Add pytest structure (#56)

Co-authored-by: Teemu Ruokolainen <[email protected]>

* Add cli (#57)

* working cli

* Update readme

* Update readme

Co-authored-by: Teemu Ruokolainen <[email protected]>

* Cm package restructuring (#54)

* moved py files to src/vai_labs for packaging

* added vscode config to gitignore

* updated package name in run_pipeline

* fixed pyproject matplotlib import

* fixed path for import helper

* updated project version for PYPI

* updated readme and pyproject.toml

* fixed README typo

* removed depreciated setup script

* fixed path in import_helper.py

* Update README.md

Updated repo name in README

* moved README images

* Update README image paths

* Remove readme.md.bak (#58)

Co-authored-by: Teemu Ruokolainen <[email protected]>

* Cm name updates (#59)

* updated naming and paths for projects

* merged README files

* updated README naming

* update import names in README

* updated example links

* updated missed readme names

* find-replace aidesign refs -> vai_lab

* renamed files containing old ai_design name

* renamed test file

* Css-gui_bugFixing (#60)

* Adjust aidCanvas' buttons' size

* Correctly resize lower buttons' sizes

* Resize buttons, pad radio frame, correct click on in or out

* Fix issue with data path

* Fix upload data mattrix path

* moved test script

Co-authored-by: cam586 <[email protected]>

* Fix repository url in readme and pyproject.toml (#63)

* added opencv & pytest (#62)

* Clean up lingering/duplicate files. (#64)

Co-authored-by: Teemu Ruokolainen <[email protected]>

* Added debug option (#65)

* add debug option to core,GUI

* Update test_launch.py

Add test_launch() function for pytest discovery

Co-authored-by: teemu <[email protected]>

* Added CI Test using Github Actions (#66)

* add debug option to core,GUI

* Update test_launch.py

Add test_launch() function for pytest discovery

* added initial actions yaml

* testing now triggered on PR

* removed testing for python3.7

* added option for manually running actions

* added workflow_dispatch options

* temp removal of PR trigger

* testing using push trigger

* removed incorrect pytest dir

* added env variable for GUI testing

* added virtual display for GUI testing

* removed old yml tag

* install virtual display with existing action

* fixed yml syntax

* fixed xvfb syntax

* removed old xvfb tags

* update to node.js 16

* test pip caching

* removed cache test

* fixed cov file path

* removed testing for python3.7

* install virtual display with existing action

* update to node.js 16

* fixed cov file path

* changed trigger condition to pull request

* renamed tests package

* added programming language classifiers

* changed trigger to PR

* added test and version shields

* fixed README typo

* gitignore any venv

* removed unneeded tk dep from toml

* simplified test call

* testing manual workflow trigger

* added workflow_dispatch options

* re-added pull_request trigger

Co-authored-by: teemu <[email protected]>

* Remove flit from readme (#67)

Co-authored-by: Teemu Ruokolainen <[email protected]>

* Cm fix readme img path (#68)

* fixed readme image paths

* updated version number

* Css fix pluginarchitecture diagram (#69)

* Include plugin diagram

* Delete old verion

* Update plugin diagram

* Update plugin diagram

* Add white filling to squares for dark mode

* fixed contribute urls

Co-authored-by: cam586 <[email protected]>

* Add rough sphinx documentation (#74)

* Add autogen docsting sphinx docs

* ReadTheDocs

* Building version

* Change index page title

* Add github actions workflow

* Update README

* Add pip install . to documentation.yml

* Add README.md as a page in documentation

* Add sphinx-apidoc command to readme; gitignore generated rst files

* Update readme sphinx commands

* Update readme

* Add comments

* Update commands in documentation workflow

* Fix typo in .gitignore

* Remove _static folder from config to remove warning message

* Specify python=3.10 for workflow

* Remove pip install sphinx-apidoc, no such package

* Update readme

* added docs build badge to readme

* fixed error-causing docstring

Co-authored-by: Teemu Ruokolainen <[email protected]>
Co-authored-by: chris <[email protected]>

* Cm test docs (#76)

* edited branch name for doc building

* test actions

* added jekyll options

* removed settings

* fixed gh pages deployment

* Cm add docs (#77)

* changed copyright year

* updated readme headings

* moved tutorials from readme to docs

* removed tutorials from readme

* added getting started page to index toc

* Update python=3.8 to python=3.10 in readme

* Cm feature add tests (#80)

* bumped version number

* add pilot example test

* simplified core.py

* improved naming and docs in core

* progress tracker.  ->

* added example script iteration

* fixed loop error msg in COre

* updated progress tracker naming (#71)

* fixed for loop logic and error handling in core (#72)

* Cm fix tracker loops (#73)

* fixed for loop logic and error handling in core

* fixed tracker dict population for loops

* Fix Progess Tracker naming

Removing Initialiser name requirement from Progress Tracker

* Remove Canvas if there are no ccordinates

* Fixing last fix.  Correctly read modules inside loop

* Fix error with coordinates case

* minor typo fix in core

* renamed .s variable to .xml_handler for readability

* fixed xml_handler naming in GUI_Core

* Trying to fix coordinates case

* moved avail_plugins to init

* Display treeview for no-coordinates case (need fixes))

* FIX - Consistent input and output naming issue

* Functioning progress tracker for coord and no coord

* Fixed list plugin options issues

* Minor fixes to test usability

* changed avail plugins options to readable names

* removed private and test files from avail_plugins

* removed old xml files, mod pybullet

* Fix parent issue

* fixed pybullet and canvas gui-test issues

* fixed pytest errors (except manual plugin)

* changed sklearn->scikit-learn in toml

* added pybullet to toml

* Remove testing file

* test fix with scalar

* translate boolean literals

* removed python 3.8,3.9

* added  param to ridge example

* removed closed check from core

* switced core check to _debug

---------

Co-authored-by: Carlos Sevilla Salcedo <[email protected]>

---------

Co-authored-by: Carlos Sevilla Salcedo <[email protected]>

* Fix examples path in README.md

* Another bad examples path

* update conda env part in README.md

* fixed calls to undefined parent (#90)

* Added Bayesian Optimisation plugin

* Fix merge errors

* Remove old run file

* Modify plugin types

* Addoptions to BO

* Css feature trying to catch errors (#94)

* Move Modelling plugins functions to template

* Add clsutering methods to template

* Change function doc

* Move DataProcessing plugins functions to template

* Update pipeline for testing

* Update init

* Fix conflicts

* Add DecisionMaking plugin template

* Fixing issues with Optimisation module

* Fixed errors passing params to BO

* Changed plugin Template to work for BO params

Still need to fix issue when running the BO

* BO suggests points correctly

* Change xml_handler naming

Change xml_handler naming to fit with the other UIs

* Typo correction

* Added bayes_opt optimisation plugin

* Modify integral to simpson

* Fixed issue with UI

---------

Co-authored-by: cam586 <[email protected]>
Co-authored-by: teemu <[email protected]>
Co-authored-by: Teemu Ruokolainen <[email protected]>
Co-authored-by: Richard Darst <[email protected]>

* Fix issue with example

* Added basic dataFlow selection

* Fixed issue with module list

* Remove option of data self-looping

* Add plugin's data input to XML

* Fixed error with ridge regression

* Added new data reading option

* Fix minor errors

* Define data communication

Redifined data passing and reading between different modules. `vai_lab_core` now stores all output data for each module and could be accessible by any module. Not tested on loops.

* Fixed issue duplicated module entries

Still need to fix issue with module name reading.

* Fixed names used to define input

* Clean some example files

* Remove testing print

* Add output module as editable

* Include a checklist for output data

* Fixed issue with output update

* Write output data in XML file working

* Include output path for outdata

* Storing output in file

* Fix space reading

* Allow one or more stored module output

* Update XML examples to dataflow

* Store relative path

* Add option of relative or absolute path

* Allow relative path

* Change input data definition to optionmenu

* By default store output of last module

* Update example coordinates

* Improve look of output data's optionmenu

---------

Co-authored-by: cam586 <[email protected]>
Co-authored-by: teemu <[email protected]>
Co-authored-by: Teemu Ruokolainen <[email protected]>
Co-authored-by: Richard Darst <[email protected]>
- Fixed issue storing options from methods
- Removed 'Data' for DataProcessing modules
- Make correct comparison to determine if options are updated
- Correctly store method's data input. Stores name of variable.
@sevisal sevisal closed this Sep 22, 2023
@sevisal sevisal deleted the css-functionSelection branch September 22, 2023 12:51
@sevisal sevisal restored the css-functionSelection branch September 22, 2023 12:51
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