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loadTaxonomy issue
I keep getting this error when taxonomies are being created from a docker.
"Loading an older AIT .h5ad version. Converting dendrogram to JSON format for mapping."
I suspect that it is not correctly looking for the JSON format in the uns before rewriting it from the .RDS file.
checkTaxonomy issues
Even with a valid taxonomy, I get this issue
"WARNING: A UMAP is invalid or not provided in AIT.anndata$obsm$umap."
Probably some minor update needed.
Also, I think it only checks "standard" and not the other modes (e.g., AIT30.1)
The text was updated successfully, but these errors were encountered:
loadTaxonomy issue
I keep getting this error when taxonomies are being created from a docker.
"Loading an older AIT .h5ad version. Converting dendrogram to JSON format for mapping."
I suspect that it is not correctly looking for the JSON format in the uns before rewriting it from the .RDS file.
checkTaxonomy issues
Even with a valid taxonomy, I get this issue
"WARNING: A UMAP is invalid or not provided in AIT.anndata$obsm$umap."
Probably some minor update needed.
Also, I think it only checks "standard" and not the other modes (e.g., AIT30.1)
The text was updated successfully, but these errors were encountered: