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functions.py
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functions.py
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# -*- coding: utf-8 -*-
import datetime
import os
import sys
import time
from decimal import Decimal
import qdarktheme
import serial.tools.list_ports
from PyQt6 import QtCore, QtGui, QtWidgets
from serial.tools.list_ports import comports
import math
import numpy as np
from matplotlib.backends.backend_qt5agg import FigureCanvasQTAgg as FigureCanvas
from matplotlib.backends.backend_qt5agg import NavigationToolbar2QT
from matplotlib.figure import Figure
from matplotlib.collections import LineCollection
import matplotlib.font_manager as font_manager
import logging.config
from settings import settings_log
import json
import global_hotkeys as hotkey
import resources_rc
icon_dict = {
"const_icon.png": "Constant",
"ramp_icon.png": "Ramp",
"stepped_icon.png": "Stepped",
"pulse_icon.png": "Pulse",
"bolus_icon.png": "Bolus",
"concentration_icon.png": "Concentration",
"gradient_icon.png": "Gradient",
"autofill_icon.png": "Autofill",
}
label_path_StepGuide_dict = {
"Constant": ["Format: INF|WD, rate, units, target(t/v)", "const_param.png"],
"Ramp": ["Format: INF|WD, rate r<sub>start</sub>, rate r<sub>end</sub>, target t", "ramp_param.png"],
"Stepped": ["Format: INF|WD, rate [r<sub>1</sub>, r<sub>2</sub>], target [t, steps]", "stepped_param.png"],
"Pulse": ["Format: INF|WD, rate [r<sub>1</sub>, r<sub>2</sub>], [v<sub>1</sub>, v<sub>2</sub>]| ["
"t<sub>1</sub>, t<sub>2</sub>], pulses", "pulse_param.png"],
"Bolus": ["Format: target t, target v", "bolus_param.png"],
"Concentration": ["Format: weight, rate, concentration[%], Dose|time lag", "concentration_param.png"],
"Gradient": ["Format: total rate, [addr.1-[%], addr.2-[%]...] , time|steps", "gradient_param.png"],
"Autofill": ["Format: INF/WD| WD/INF, [r<sub>1</sub>, r<sub>2</sub>], v per Cyc, total v/ Cyc",
"autofill_param.png"],
}
# stepGuide_ReMatch = {
# "Constant": "^(INF|WD)[,;]\s*(\d+)[,;]\s*(nl\/s|nl\/min|pl\/s|pl\/min|u\/s|u\/min|ml\/s|ml\/min)?$",
# "Ramp":,
# "Stepped":,
# "Pulse":,
# "Bolus":,
# "Concentration",
# "Gradient":,
# "Autofill":
# }
label_stepGuide_dict = {
"Constant": "Format: INF|WD, rate, units",
"Ramp": "Format: INF|WD, rate [r<sub>1</sub>, r<sub>2</sub>], target t",
"Stepped": "Format: INF|WD, rate [r<sub>1</sub>, r<sub>2</sub>], target [t, steps]",
"Pulse": "Format: INF|WD, rate [r<sub>1</sub>, r<sub>2</sub>], [v<sub>1</sub>, v<sub>2</sub>]| ["
"t<sub>1</sub>, t<sub>2</sub>], pulses",
"Bolus": "Format: target t, target v",
"Concentration": "Format: weight, rate, concentration[%], Dose|time lag",
"Gradient": "Format: total rate, [addr.1-[%], addr.2-[%]...] , time|steps",
"Autofill": "Format: INF/WD| WD/INF, [r<sub>1</sub>, r<sub>2</sub>], v per Cyc, total v/ Cyc",
}
import_dict_rename = {
"Constant": "Constant rate",
"Ramp": "Ramp rate",
"Stepped": "Stepped rate",
"Pulse": "Pulse flow",
"Bolus": "Bolus delivery",
"Concentration": "Concentration delivery",
"Gradient": "Gradient",
"Autofill": "Autofill",
}
# Configuration logging functionality
logging.config.dictConfig(settings_log.LOGGING_DIC)
logger_debug_console = logging.getLogger('logger1') # Console print
logger_info_console_file = logging.getLogger('logger2') # Console & file recording
logger_info_file = logging.getLogger('logger3')
# Logging module after packaging as an executable application
# 获取当前目录下的日志文件路径
# Set global warning filter for pyqtSignal, it still works though
# warnings.filterwarnings("ignore", category=UserWarning, message="Cannot find reference 'connect' in 'pyqtSignal | pyqtSignal'")
"""Class to be called in MainWindow to set up the port connection"""
# Bug to be solved: switch connection from a normally running port to a occupied port
class CheckSerialThread(QtCore.QThread):
CONNECTION_STATUS_CHANGED = QtCore.pyqtSignal(str)
SERIAL_OPENED = QtCore.pyqtSignal(bool)
PORT_PARAM_DICT = {}
PORT_PARAM_DICT_PREVIOUS = {}
TIMEOUT_COUNT = 0
MAX_TIMEOUT = 20
def __init__(self, ui, parent):
super().__init__(parent)
self.read_send_thread = None
self.send_thread = None
self.read_thread = None
self.port_param_dict_func = {}
self.ser = None
self.ui = ui
self.parent = parent
self.connected = False
self.auto_reconnect = True
self._pause_thread = False # 用于暂停串口检测线程的标志
self.wait_condition = QtCore.QWaitCondition()
self.mutex = QtCore.QMutex()
self.mutex_sub = QtCore.QMutex()
self.auto_reconnect_str = None
self.flag_auto_reconnect = True
def run(self):
self.mutex.lock()
try:
if self._pause_thread and not self.auto_reconnect:
self.wait_condition.wait(self.mutex)
else:
# Get serial parameters from the dialog
self.port_param_dict_func = CheckSerialThread.PORT_PARAM_DICT
# print(f'dict from run: {self.port_param_dict_func}\n') # 有输出
if self.port_param_dict_func['port'] != '' and not self.connected:
self.CONNECTION_STATUS_CHANGED.emit(f"Opening port {self.port_param_dict_func['port']}.")
try:
self.ser = serial.Serial(**self.port_param_dict_func)
# Config buffer zone for port read and write, to avoid crashing of program
self.ser.set_buffer_size(rx_size=4096, tx_size=4096)
# self.start_read_thread()
self.start_read_send_thread()
# self.start_send_thread()
self.ser.flushInput()
self.ser.flushOutput()
# print('连接成功的参数：', self.port_param_dict_func)
# 连接成功后清空类变量中的参数字典
CheckSerialThread.PORT_PARAM_DICT = {}
self.connected = True # 设置连接成功的标志
# print(f'dict from run: {self.port_param_dict_func}\n')
self.CONNECTION_STATUS_CHANGED.emit(
f"Port {self.ser.port} successfully opened. [{self.ser.baudrate}, {self.ser.bytesize}, {self.ser.parity}, {self.ser.stopbits}]")
self.SERIAL_OPENED.emit(True)
# CheckSerialThread.return_ser_status(self)
except serial.SerialException as e:
if 'PermissionError' in str(e):
self.CONNECTION_STATUS_CHANGED.emit(
f"Unable to open the port {self.port_param_dict_func['port']}. Please ensure the port is available. {str(e)}")
# Try to open again if the port is released within 10 seconds
self.connected = False
self.SERIAL_OPENED.emit(False)
# self.timer_reconnect = QtCore.QTimer()
# self.timer_reconnect.timeout.connect(self.auto_reconnect_from_failure)
# self.timer_reconnect.moveToThread(self)
# self.timer_reconnect.timeout.connect(self.auto_reconnect_from_failure)
# self.timer_reconnect.start(1000)
# self.exec()
# QtCore.QThread.exec(self)
# timer_reconnect_thread.start()
# self.timer_resume_start(e)
# self.timer_reconnect.start(1000)
# self.pause_thread()
# print('self.isRunning()', self.isRunning())
self.auto_reconnect_from_failure(e, self.port_param_dict_func)
else:
# print(e.args[0].split(":")[1])
self.CONNECTION_STATUS_CHANGED.emit(
f"Unable to configure the port {self.port_param_dict_func['port']}. {e.args[0].split(':')[1]}")
self.connected = False
self.SERIAL_OPENED.emit(False)
self._pause_thread = False
self.auto_reconnect = True
# self.auto_reconnect_from_failure()
elif self.port_param_dict_func['port'] == '':
self.CONNECTION_STATUS_CHANGED.emit('Fatal Error!')
self.SERIAL_OPENED.emit(False)
# time.sleep(0.5)
finally:
self.mutex.unlock()
def set_port_params(self, dict_port):
if CheckSerialThread.PORT_PARAM_DICT != dict_port: # 从更新参数后恢复
self.resume_thread()
self._pause_thread = False
self.auto_reconnect = True
self.disconnect_from_port(auto_reconnect=True, _pause_thread=False)
CheckSerialThread.PORT_PARAM_DICT = dict_port
self.start(auto_reconnect=True, _pause_thread=False)
if self._pause_thread and not self.auto_reconnect: # 从stop恢复
self.resume_thread()
CheckSerialThread.PORT_PARAM_DICT = dict_port
self.start(auto_reconnect=True, _pause_thread=False)
elif not self._pause_thread and self.auto_reconnect: # 从重连超时恢复
self.resume_thread()
CheckSerialThread.PORT_PARAM_DICT = dict_port
self.start(auto_reconnect=True, _pause_thread=False)
else:
pass
def start(self, auto_reconnect=True, _pause_thread=False):
self.auto_reconnect = auto_reconnect
self._pause_thread = _pause_thread
# print('start!!', self.auto_reconnect, self._pause_thread)
super().start()
def disconnect_from_port(self, auto_reconnect=None, _pause_thread=None):
try:
if self.connected and self.ser is not None and self.ser.is_open:
self.CONNECTION_STATUS_CHANGED.emit(f"Port {self.ser.port} closed.")
self.ser.close()
self.stop_read_send_thread()
self.ser = None
self.connected = False
self.SERIAL_OPENED.emit(False)
# 自动重连接√，线程休眠x : 由方法调用
if auto_reconnect and not _pause_thread:
self.auto_reconnect = True
self._pause_thread = False
# 自动重连x，线程休眠√ : 由按钮断开
elif not auto_reconnect and _pause_thread:
self.auto_reconnect = False
self._pause_thread = True
self.SERIAL_OPENED.emit(False)
CheckSerialThread.PORT_PARAM_DICT = {}
CheckSerialThread.PORT_PARAM_DICT_PREVIOUS = {}
else:
# self.ser is None时：通过stop按钮停止失败自动重连
CheckSerialThread.TIMEOUT_COUNT = CheckSerialThread.MAX_TIMEOUT
except Exception as e:
# logger_info_console_file.info(str(e))
logger_info_console_file.info(e)
self.CONNECTION_STATUS_CHANGED.emit(f"Failed to close port {self.ser.port}: " + str(e))
self.connected = False
self.ser = None
self.SERIAL_OPENED.emit(False)
def pause_thread(self):
self._pause_thread = True
def resume_thread(self):
self.auto_reconnect = True
self._pause_thread = False
self.wait_condition.wakeAll()
def timer_resume_start(self, error_port):
# print('timer_resume_start called!')
if error_port:
# print(error_port)
# self.timer_reconnect.timeout.disconnect()
# self.timer_reconnect.timeout.connect(self.auto_reconnect_from_failure)
# self.timer_reconnect.start(1000)
# print(self.timer_reconnect.timerId())
pass
# def auto_reconnect_from_failure(self):
# # Using QTimer to substitute time.sleep(), deprecated due to compatibility problem of QTimer in QThread
# print('auto_reconnect_from_failure called!')
# dict_port = CheckSerialThread.PORT_PARAM_DICT
# print(self.count)
# if self.count < 10:
# if self.ser is None and not self.connected:
# self.CONNECTION_STATUS_CHANGED.emit(
# f"Try to reconnect port {self.port_param_dict_func['port']}, timeout : {int(10 - self.count)}s.")
# try:
# self.ser = serial.Serial(**dict_port)
# except Exception as e:
# logger_info_console_file.info(f"1111111 {str(e)}")
# finally:
# self.count += 1
# # self.timer_reconnect.start(500)
# self.timer_reconnect.singleShot(500, self.auto_reconnect_from_failure)
# print(self.count)
# else:
# self.connected = True
# self.ser.set_buffer_size(rx_size=4096, tx_size=4096)
# self.start_read_send_thread()
# self.ser.flushInput()
# self.ser.flushOutput()
# self.CONNECTION_STATUS_CHANGED.emit(f"Successfully reconnected to port {self.ser.port}.")
# self.SERIAL_OPENED.emit(True)
# CheckSerialThread.PORT_PARAM_DICT = {}
# return
# else:
# self.timer_reconnect.stop()
# self.count = 0
# self.CONNECTION_STATUS_CHANGED.emit(f"Reconnection to port {dict_port['port']} failed, please check "
# f"the port usage.")
# self.SERIAL_OPENED.emit(False)
# self.ser = None
# self._pause_thread = True
# self.auto_reconnect = False
# # break
# # except Exception as e:
# # count = 0
# # print(count)
# #
# # print(self.count)
# # # finally:
# # self.count += 1
#
# # time.sleep(0.5)
# # continue
# # self.auto_reconnect_from_failure(failure_str=failure_str, dict_port=dict_port)
# # else:
# # self.count = 0
# # self.CONNECTION_STATUS_CHANGED.emit(f"Reconnection to port {dict_port['port']} failed, please check "
# # f"the port usage.")
# # self.SERIAL_OPENED.emit(False)
# # self.ser = None
# # self._pause_thread = False
# # self.auto_reconnect = True
#
def auto_reconnect_from_failure(self, failure_str, dict_port):
# 通过已连接的串口向被占用串口切换的时候，要停止当前的线程，否则会造成time.sleep()抢占线程资源，导致无法自动连接
self._pause_thread = True
self.auto_reconnect = False
if failure_str:
# print(str(failure_str).split(':')[1])
self.mutex_sub.lock()
CheckSerialThread.TIMEOUT_COUNT = 0
while (
self.ser is None or not self.connected) and CheckSerialThread.TIMEOUT_COUNT < CheckSerialThread.MAX_TIMEOUT:
self.CONNECTION_STATUS_CHANGED.emit(
f"Attempting to reopen port {self.port_param_dict_func['port']}, {str(failure_str).split(':')[1]}, timeout : {int(CheckSerialThread.MAX_TIMEOUT / 2 - CheckSerialThread.TIMEOUT_COUNT * 0.5)}s.")
try:
self.ser = serial.Serial(**dict_port)
self.ser.set_buffer_size(rx_size=4096, tx_size=4096)
self.connected = True
self.start_read_send_thread()
self.ser.flushInput()
self.ser.flushOutput()
self.CONNECTION_STATUS_CHANGED.emit(
f"Port {self.ser.port} successfully opened. [{self.ser.baudrate}, {self.ser.bytesize}, {self.ser.parity}, {self.ser.stopbits}]")
self.SERIAL_OPENED.emit(True)
CheckSerialThread.PORT_PARAM_DICT = {}
break
except Exception as e:
# logger_info_console_file.info(f"{str(e)}")
logger_info_console_file.info(f"{str(e)}")
CheckSerialThread.TIMEOUT_COUNT += 1
time.sleep(0.5)
else:
CheckSerialThread.TIMEOUT_COUNT = 0
self.CONNECTION_STATUS_CHANGED.emit(f"Reopen port {dict_port['port']} failed, please check "
f"the port usage.")
self.SERIAL_OPENED.emit(False)
self.ser = None
self.connected = False
self._pause_thread = False
self.auto_reconnect = True
self.mutex_sub.unlock()
# @staticmethod
def get_ser(self):
return self.ser
def start_read_thread(self):
pass
# self.read_thread = ReadDataFromPort(ser=self.ser, ui_main=self.ui)
# self.read_thread.start()
# if self.read_thread.isRunning():
# print('read_thread running', self.read_thread.ser)
def stop_read_thread(self):
pass
# if self.read_thread:
# self.read_thread.terminate()
def start_send_thread(self):
# self.send_thread = SendDataToPort(check_serial_thread=None, read_data_from_port=None, ser=self.ser,
# ui_main=self.ui)
# self.send_thread.start()
# if self.send_thread.isRunning():
# print('send_thread running!', self.send_thread.ser)
pass
def stop_send_thread(self):
pass
# if self.send_thread:
# self.send_thread.terminate()
def start_read_send_thread(self):
self.read_send_thread = ReadSendPort(ser=self.ser, ui_main=self.ui, parent=None)
self.read_send_thread.start()
def stop_read_send_thread(self):
if self.read_send_thread:
# self.read_send_thread.terminate()
self.read_send_thread.stop()
self.read_send_thread.wait()
# Check port usage: deprecated
@staticmethod
def port_is_in_use(port: str) -> bool:
for info in serial.tools.list_ports.comports():
# logger_debug_console.info(info.device)
if info.device == port:
return True
return False
# 为避免与串口检测线程冲突造成阻塞，另起两个线程，分别负责串口数据的发送和接收
# class SendDataToPort(QtCore.QThread):
# ENCODE_TYPE = 'utf-8'
#
# def __init__(self, parent, check_serial_thread, receive_status=None, ser=None, ui_main=None):
# super().__init__(parent)
# self.force_level = None
# self.run_commands_set_ButtonClear = {}
# self.mutex = QtCore.QMutex()
# self.mutex_sub = QtCore.QMutex()
# self.check_serial_thread = check_serial_thread
# # self.read_data_from_port = read_data_from_port
# self.ser = ser
# # self.read_data_from_port = read_data_from_port
# # self.read_data_from_port = ReadDataFromPort(self.check_serial_thread.ser)
# self.ui = ui_main
# self.receive_status = receive_status
# self.run_commands_set = {}
# self.run_commands_set_Syrm = {}
# self.run_commands_set_INF = {}
# self.run_commands_set_WD = {}
# self.run_commands_set_GetResponse_INF = {}
# self.run_commands_set_GetResponse_WD = {}
# self.run_commands_set_ClearTarget = {}
# self.run_commands_set_Clear_INF = {}
# self.run_commands_set_Clear_WD = {}
# self.run_commands_set_Ramp = {}
# self.status_str = None
# self.args_list = None
# self.timer_run = QtCore.QTimer()
# self.running_flag = True
# # self.timer_run.timeout.connect(lambda: self.ser_quick_mode_command_set(ui, setups_dict_quick_mode))
#
# # self.read_data_from_port.receive_status.connect(lambda status: self.send_thread_start(status))
#
# def run(self):
# print('Send thread running: ', self.isRunning())
# print(self.ser)
# print(self.receive_status)
# if self.ser is None:
# # self.quit()
# # return
# pass
# while True:
# # self.mutex.lock()
# try:
# pass
# # print('self.receive_status from send class!', self.receive_status)
# # self.read_data_from_port.receive_status.connect(self.handle_receive_status)
# # else:
# # pass
# # self.read_data_from_port.receive_status.connect(self.handle_receive_status)
# # print(self.status_str)
# except Exception as e:
# logger_debug_console.info(e)
#
# def ser_command_catalog(self):
# # print('ser_command_catalog called!')
# # print('From send thread: ', self.ser)
# # print(self.check_serial_thread.ser, type(self.check_serial_thread.ser))
# # print(self.check_serial_thread, self.read_data_from_port)
# # self.status_str = self.read_data_from_port.receive_status()
# print(self.ser)
# self.mutex_sub.lock()
# self.running_flag = False
# if isinstance(self.ser, serial.Serial):
# # self.start()
# self.ser.write('@cat\r\n'.encode(SendDataToPort.ENCODE_TYPE))
# # print(SendDataToPort.ENCODE_TYPE)
# else:
# pass
# self.mutex_sub.unlock()
#
# def ser_command_tilt(self):
# self.mutex_sub.lock()
# if isinstance(self.check_serial_thread.ser, serial.Serial):
# self.check_serial_thread.ser.write('@tilt\r\n'.encode(SendDataToPort.ENCODE_TYPE))
# else:
# logger_info_console_file.warning(
# f"self.ser is not a serial.Serial object, it's {type(self.check_serial_thread.ser)}")
# self.mutex_sub.unlock()
#
# def get_set_address(self, ui):
# self.mutex_sub.lock()
# if isinstance(self.check_serial_thread.ser, serial.Serial):
# if ui.address_input.text() and ui.address_input.text() != '':
# # print('addr.', ui.address_input.text())
# self.check_serial_thread.ser.write(
# ('@addr. ' + str(ui.address_input.text()) + '\r\n').encode(SendDataToPort.ENCODE_TYPE))
# else:
# self.check_serial_thread.ser.write(('@addr. ' + '\r\n').encode(SendDataToPort.ENCODE_TYPE))
# else:
# pass
# self.mutex_sub.unlock()
#
# def send_command_manual(self, ui):
# # print('send_command_manual called!')
# self.mutex_sub.lock()
# if self.check_serial_thread.ser and isinstance(self.check_serial_thread.ser, serial.Serial):
# if ui.lineEdit_send_toPump.currentText() and ui.lineEdit_send_toPump.currentText() != '':
# current_time = QtCore.QDateTime.currentDateTime().toString("[hh:mm:ss]")
# str_to_send = '@' + ui.lineEdit_send_toPump.currentText() + '\r\n'
# try:
# self.check_serial_thread.ser.write(str_to_send.encode(SendDataToPort.ENCODE_TYPE))
# ui.commands_sent.moveCursor(QtGui.QTextCursor.MoveOperation.End)
# # ui.commands_sent.insertHtml(f"<b>{current_time} >></b>\r\n{str_to_send}")
# ui.commands_sent.append(f"{current_time} >>\r\n{str_to_send}")
# except Exception as e:
# logger_info_console_file.warning(e)
# # 如果数据未能成功写入，并且超过了缓冲区最大限制，则重置buffer
# if len(self.check_serial_thread.ser.out_waiting) > 4096:
# self.check_serial_thread.ser.reset_output_buffer()
# ui.commands_sent.append(f"{current_time} >>\r\nBuffer overflow, clearing buffer...")
# self.check_serial_thread.ser.write(str_to_send.encode(SendDataToPort.ENCODE_TYPE))
# ui.commands_sent.moveCursor(QtGui.QTextCursor.MoveOperation.End)
# ui.commands_sent.append(f"{current_time} >>\r\n{str_to_send}")
# # 将输入唯一保存在下拉列表中
# if ui.lineEdit_send_toPump.currentText() not in [ui.lineEdit_send_toPump.itemText(i) for i in
# range(ui.lineEdit_send_toPump.count())]:
# ui.lineEdit_send_toPump.addItem(ui.lineEdit_send_toPump.currentText())
# else:
# pass
# else:
# pass
# else:
# pass
# self.mutex_sub.unlock()
#
# def ser_bgl_level(self, ui):
# value = ui.bgLight_Slider.value()
# self.mutex_sub.lock()
# current_time = QtCore.QDateTime.currentDateTime().toString("[hh:mm:ss]")
# if isinstance(self.check_serial_thread.ser, serial.Serial):
# self.check_serial_thread.ser.write(('@dim ' + str(value) + '\r\n').encode(SendDataToPort.ENCODE_TYPE))
# ui.commands_sent.moveCursor(QtGui.QTextCursor.MoveOperation.End)
# # ui.commands_sent.insertHtml(f"<b>{current_time} >></b>\r\n{str_to_send}")
# ui.commands_sent.append(f"{current_time} >>\r\nBackground light set to: {str(value)} %")
# else:
# logger_info_console_file.warning(
# f"self.ser is not a serial.Serial object, it's {type(self.check_serial_thread.ser)}")
# pass
# self.mutex_sub.unlock()
#
# def ser_force_limit(self, ui):
# value = ui.forceLimit_Slider.value()
# self.mutex_sub.lock()
# current_time = QtCore.QDateTime.currentDateTime().toString("[hh:mm:ss]")
# if isinstance(self.check_serial_thread.ser, serial.Serial):
# self.check_serial_thread.ser.write(('@force ' + str(value) + '\r\n').encode(SendDataToPort.ENCODE_TYPE))
# ui.commands_sent.moveCursor(QtGui.QTextCursor.MoveOperation.End)
# ui.commands_sent.append(f"{current_time} >>\r\nForce limit set to: {str(value)} %")
# else:
# logger_info_console_file.warning(
# f"self.ser is not a serial.Serial object, it's {type(self.check_serial_thread.ser)}")
# pass
# self.mutex_sub.unlock()
#
# @staticmethod
# def ser_bgl_label_show(ui):
# value = ui.bgLight_Slider.value()
# ui.bgLight_Label.setText("BG-Light: " + str(value) + "[%]")
#
# @staticmethod
# def ser_force_label_show(ui):
# value = ui.forceLimit_Slider.value()
# ui.forceLimit_Label.setText("Force Limit: " + str(value) + "[%]")
#
# def fast_forward_btn(self):
# if isinstance(self.check_serial_thread.ser, serial.Serial):
# self.check_serial_thread.ser.write('@run\r\n'.encode(SendDataToPort.ENCODE_TYPE))
# else:
# pass
#
# def rewind_btn(self):
# if isinstance(self.check_serial_thread.ser, serial.Serial):
# self.check_serial_thread.ser.write('@rrun\r\n'.encode(SendDataToPort.ENCODE_TYPE))
# else:
# pass
#
# def release_to_stop(self):
# if isinstance(self.check_serial_thread.ser, serial.Serial):
# self.check_serial_thread.ser.write('@stop\r\n'.encode(SendDataToPort.ENCODE_TYPE))
# else:
# pass
#
# def ser_quick_mode_command_set(self, ui, setups_dict_quick_mode):
# self.mutex.lock()
# update_combox_syr_enabled(ui, setups_dict_quick_mode)
# self.force_level = force_level_recommendation(self.ui)
# self.run_commands_set = {}
# self.run_commands_set_Syrm = {}
# self.run_commands_set_INF = {}
# self.run_commands_set_WD = {}
# self.run_commands_set_GetResponse_INF = {"Infused volume": "@ivolume\r\n",
# "Infused time": "@itime\r\n",
# "Motor rate": "@crate\r\n",
# "Infusing rate": "@irate\r\n"}
# self.run_commands_set_GetResponse_WD = {"Withdrawn volume": "@wvolume\r\n",
# "Withdrawn time": "@wtime\r\n",
# "Motor rate": "@crate\r\n",
# "Withdraw rate": "@wrate\r\n"}
# self.run_commands_set_ClearTarget = {"Clear target t:": "@cttime\r\n",
# "Clear target V:": "@ctvolume\r\n",
# "Writes to memory: OFF:": "@NVRAM\r\n",
# "Default force level": f"@force {self.force_level}\r\n"}
# if all(value is not None and value != '' for key, value in setups_dict_quick_mode.items() if
# key in ['Run Mode', 'Syringe Info', 'Flow Parameter']):
# # 注射器选择指令
# self.run_commands_set_Syrm['Syringe Type'] = {
# 'prompt': ' >>Syringe selected: ' + setups_dict_quick_mode['Syringe Info']['Selected Syringe'],
# 'command': '@syrm' + ' ' + setups_dict_quick_mode['Syringe Info']['Selected Syringe'] + '\r\n'}
#
# if setups_dict_quick_mode['Run Mode'] == 'INF':
# self.run_commands_set_INF['Rate INF'] = {
# 'prompt': ' >>Infusion rate: ' + setups_dict_quick_mode['Flow Parameter']['Frate INF'],
# 'command': '@irate' + ' ' + setups_dict_quick_mode['Flow Parameter']['Frate INF'] + '\r\n'}
# if 'l' in setups_dict_quick_mode['Flow Parameter']['Target INF']:
# self.run_commands_set_INF['Target INF'] = {
# "prompt": " >>Target Volume: " + setups_dict_quick_mode['Flow Parameter'][
# 'Target INF'],
# "command": '@tvolume' + ' ' +
# setups_dict_quick_mode['Flow Parameter'][
# 'Target INF'] + '\r\n'}
# else:
# self.run_commands_set_INF['Target INF'] = {
# "prompt": ' >>Target Time: ' + setups_dict_quick_mode['Flow Parameter'][
# 'Target INF'],
# "command": '@ttime' + ' ' +
# setups_dict_quick_mode['Flow Parameter'][
# 'Target INF'] + '\r\n'}
# self.run_commands_set_INF['Run Code INF'] = {"prompt": ' >>Infusion running:', "command": "@irun\r\n"}
# # self.run_commands_set_INF['Motor rate INF'] = 'crate\r\n'
# # self.run_commands_set_INF['Volume INF'] = 'ivolume\r\n'
# elif setups_dict_quick_mode['Run Mode'] == 'WD':
# self.run_commands_set_WD['Rate WD'] = {
# 'prompt': ' >>Withdraw rate: ' + setups_dict_quick_mode['Flow Parameter']['Frate WD'],
# 'command': '@wrate' + ' ' + setups_dict_quick_mode['Flow Parameter']['Frate WD'] + '\r\n'}
# if 'l' in setups_dict_quick_mode['Flow Parameter']['Target WD']:
# self.run_commands_set_WD['Target WD'] = {
# "prompt": " >>Target Volume: " + setups_dict_quick_mode['Flow Parameter'][
# 'Target WD'],
# "command": '@tvolume' + ' ' +
# setups_dict_quick_mode['Flow Parameter'][
# 'Target WD'] + '\r\n'}
# else:
# self.run_commands_set_WD['Target WD'] = {
# "prompt": ' >>Target Time: ' + setups_dict_quick_mode['Flow Parameter'][
# 'Target WD'],
# "command": '@ttime' + ' ' +
# setups_dict_quick_mode['Flow Parameter'][
# 'Target WD'] + '\r\n'}
# self.run_commands_set_WD['Run Code WD'] = {"prompt": ' >>Withdraw running:', "command": "@wrun\r\n"}
# # self.run_commands_set_WD['Motor rate WD'] = 'crate\r\n'
# # self.run_commands_set_WD['Volume WD'] = 'wvolume\r\n'
# # print('输出命令：', run_commands_set)
# elif setups_dict_quick_mode['Run Mode'] == 'INF/ WD':
# self.run_commands_set_INF['Rate INF'] = {
# 'prompt': ' >>Infusion rate: ' + setups_dict_quick_mode['Flow Parameter']['Frate INF'],
# 'command': '@irate' + ' ' + setups_dict_quick_mode['Flow Parameter']['Frate INF'] + '\r\n'}
# if 'l' in setups_dict_quick_mode['Flow Parameter']['Target INF']:
# self.run_commands_set_INF['Target INF'] = {
# "prompt": " >>Target Volume: " + setups_dict_quick_mode['Flow Parameter'][
# 'Target INF'],
# "command": '@tvolume' + ' ' +
# setups_dict_quick_mode['Flow Parameter'][
# 'Target INF'] + '\r\n'}
# else:
# self.run_commands_set_INF['Target INF'] = {
# "prompt": ' >>Target Time: ' + setups_dict_quick_mode['Flow Parameter'][
# 'Target INF'],
# "command": '@ttime' + ' ' +
# setups_dict_quick_mode['Flow Parameter'][
# 'Target INF'] + '\r\n'}
# self.run_commands_set_INF['Run Code INF'] = {"prompt": ' >>Infusion running:', "command": "@irun\r\n"}
# # self.run_commands_set_INF['Motor rate INF'] = 'crate\r\n'
# # self.run_commands_set_INF['Volume INF'] = 'ivolume\r\n'
# # WD
# self.run_commands_set_WD['Rate WD'] = {
# 'prompt': ' >>Withdraw rate: ' + setups_dict_quick_mode['Flow Parameter']['Frate WD'],
# 'command': '@wrate' + ' ' + setups_dict_quick_mode['Flow Parameter']['Frate WD'] + '\r\n'}
# if 'l' in setups_dict_quick_mode['Flow Parameter']['Target WD']:
# self.run_commands_set_WD['Target WD'] = {
# "prompt": " >>Target Volume: " + setups_dict_quick_mode['Flow Parameter'][
# 'Target WD'],
# "command": '@tvolume' + ' ' +
# setups_dict_quick_mode['Flow Parameter'][
# 'Target WD'] + '\r\n'}
# else:
# self.run_commands_set_WD['Target WD'] = {
# "prompt": ' >>Target Time: ' + setups_dict_quick_mode['Flow Parameter'][
# 'Target WD'],
# "command": '@ttime' + ' ' +
# setups_dict_quick_mode['Flow Parameter'][
# 'Target WD'] + '\r\n'}
# self.run_commands_set_WD['Run Code WD'] = {"prompt": ' >>Withdraw running:', "command": "@wrun\r\n"}
# # self.run_commands_set_WD['Motor rate WD'] = 'crate\r\n'
# # self.run_commands_set_WD['Volume WD'] = 'wvolume\r\n'
# elif setups_dict_quick_mode['Run Mode'] == 'WD/ INF':
# self.run_commands_set_WD['Rate WD'] = {
# 'prompt': ' >>Withdraw rate: ' + setups_dict_quick_mode['Flow Parameter']['Frate WD'],
# 'command': '@wrate' + ' ' + setups_dict_quick_mode['Flow Parameter']['Frate WD'] + '\r\n'}
# if 'l' in setups_dict_quick_mode['Flow Parameter']['Target WD']:
# self.run_commands_set_WD['Target WD'] = {
# "prompt": " >>Target Volume: " + setups_dict_quick_mode['Flow Parameter'][
# 'Target WD'],
# "command": '@tvolume' + ' ' +
# setups_dict_quick_mode['Flow Parameter'][
# 'Target WD'] + '\r\n'}
# else:
# self.run_commands_set_WD['Target WD'] = {
# "prompt": ' >>Target Time: ' + setups_dict_quick_mode['Flow Parameter'][
# 'Target WD'],
# "command": '@ttime' + ' ' +
# setups_dict_quick_mode['Flow Parameter'][
# 'Target WD'] + '\r\n'}
# self.run_commands_set_WD['Run Code WD'] = {"prompt": ' >>Withdraw running:', "command": "@wrun\r\n"}
# # self.run_commands_set_WD['Motor rate WD'] = 'crate\r\n'
# # self.run_commands_set_WD['Volume WD'] = 'wvolume\r\n'
# # INF
# self.run_commands_set_INF['Rate INF'] = {
# 'prompt': ' >>Infusion rate: ' + setups_dict_quick_mode['Flow Parameter']['Frate INF'],
# 'command': '@irate' + ' ' + setups_dict_quick_mode['Flow Parameter']['Frate INF'] + '\r\n'}
# if 'l' in setups_dict_quick_mode['Flow Parameter']['Target INF']:
# self.run_commands_set_INF['Target INF'] = {
# "prompt": " >>Target Volume: " + setups_dict_quick_mode['Flow Parameter'][
# 'Target INF'],
# "command": '@tvolume' + ' ' +
# setups_dict_quick_mode['Flow Parameter'][
# 'Target INF'] + '\r\n'}
# else:
# self.run_commands_set_INF['Target INF'] = {
# "prompt": ' >>Target Time: ' + setups_dict_quick_mode['Flow Parameter'][
# 'Target INF'],
# "command": '@ttime' + ' ' +
# setups_dict_quick_mode['Flow Parameter'][
# 'Target INF'] + '\r\n'}
# self.run_commands_set_INF['Run Code INF'] = {"prompt": ' >>Infusion running:', "command": "@irun\r\n"}
# # self.run_commands_set_INF['Motor rate INF'] = 'crate\r\n'
# # self.run_commands_set_INF['Volume INF'] = 'ivolume\r\n'
# else:
# pass
#
# if not isinstance(self.check_serial_thread.ser, serial.Serial):
# QtWidgets.QMessageBox.information(ui.Run_button_quick, 'Port not connected.',
# 'Please check the port connection.')
# else:
# if setups_dict_quick_mode['Run Mode'] == 'INF':
# self.args_list = (self.ui, self.status_str, 0.8, 0.1, self.run_commands_set_ClearTarget,
# self.run_commands_set_Syrm, self.run_commands_set_INF,
# self.run_commands_set_GetResponse_INF)
# self.send_run_commands(*self.args_list)
# self.timer_run.timeout.connect(functools.partial(self.send_run_commands, *self.args_list))
# elif setups_dict_quick_mode['Run Mode'] == 'WD':
# self.args_list = (self.ui, self.status_str, 0.8, 0.1, self.run_commands_set_ClearTarget,
# self.run_commands_set_Syrm, self.run_commands_set_WD,
# self.run_commands_set_GetResponse_WD)
# self.send_run_commands(*self.args_list)
# self.timer_run.timeout.connect(functools.partial(self.send_run_commands, *self.args_list))
# elif setups_dict_quick_mode['Run Mode'] == 'INF/ WD':
# self.args_list = (self.ui, self.status_str, 0.8, 0.1, self.run_commands_set_ClearTarget,
# self.run_commands_set_Syrm, self.run_commands_set_INF,
# self.run_commands_set_GetResponse_INF, self.run_commands_set_ClearTarget,
# self.run_commands_set_WD, self.run_commands_set_GetResponse_WD)
# self.send_run_commands(*self.args_list)
# self.timer_run.timeout.connect(functools.partial(self.send_run_commands, *self.args_list))
# elif setups_dict_quick_mode['Run Mode'] == 'WD/ INF':
# self.args_list = (self.ui, self.status_str, 0.8, 0.1, self.run_commands_set_ClearTarget,
# self.run_commands_set_Syrm, self.run_commands_set_WD,
# self.run_commands_set_GetResponse_WD, self.run_commands_set_ClearTarget,
# self.run_commands_set_INF, self.run_commands_set_GetResponse_INF)
# self.send_run_commands(*self.args_list)
# self.timer_run.timeout.connect(functools.partial(self.send_run_commands, *self.args_list))
# else:
# pass
#
# self.mutex.unlock()
#
# def send_run_commands(self, ui, status_str, time_run, time_response, *run_dict):
# self.timer_run.start()
# current_time = QtCore.QDateTime.currentDateTime().toString("[hh:mm:ss]")
# for dict_run in run_dict:
# if status_str in (None, 'Continue'):
# if not isinstance(list(dict_run.values())[0], dict): # clear
# for key, value in dict_run.items():
# ui.commands_sent.append(f"{current_time} >>{key}:")
# # print(f"{current_time} >>{value}:")
# self.check_serial_thread.ser.write(value.encode(SendDataToPort.ENCODE_TYPE))
# # QtCore.QCoreApplication.instance().processEvents()
# # time.sleep(time_run)
# # 用QTimer 代替原来的time.sleep()
# self.timer_run.singleShot(time_run, QtCore.QCoreApplication.processEvents)
# logger_debug_console.debug(status_str)
# else:
# for value in dict_run.values():
# ui.commands_sent.append(f"{current_time}{value['prompt']}")
# # print(f"{current_time}{value['prompt']}")
# self.check_serial_thread.ser.write(value['command'].encode(SendDataToPort.ENCODE_TYPE))
# # QtCore.QCoreApplication.instance().processEvents()
# # time.sleep(time_run)
# self.timer_run.singleShot(time_run, QtCore.QCoreApplication.processEvents)
# # 运行到commands_set_INF/WD的'irun/wrun'时，响应会变为：'>'或者'<' || 'INF running', 'WD running'
# logger_debug_console.debug(status_str)
# elif status_str in ('INF running', 'WD running'): # 每0.1s向pump发送获取四个参数的命令
# if isinstance(list(dict_run.values())[0], str):
# while True:
# commands = ''.join(dict_run.values())
# # print('commands', commands)
# logger_debug_console.info(f"commands: {commands}")
# self.check_serial_thread.ser.write(commands.encode(SendDataToPort.ENCODE_TYPE))
# # QtCore.QCoreApplication.instance().processEvents()
# # time.sleep(time_response)
# self.timer_run.singleShot(time_response, QtCore.QCoreApplication.processEvents)
# logger_debug_console.debug(status_str)
# elif status_str == 'Target reached':
# logger_debug_console.debug(status_str)
# continue
# elif status_str == 'STOP':
# self.timer_run.stop()
# logger_debug_console.debug(status_str)
# break
#
# def clear_from_button(self, ui):
# self.run_commands_set_Clear_INF = {"Clear infused time": "@citime\r\n",
# "Clear infused volume": "@civolume\r\n"}
# self.run_commands_set_Clear_WD = {"Clear withdrawn time": "@cwtime\r\n",
# "Clear withdrawn volume": "@cwvolume\r\n"}
# self.run_commands_set_ButtonClear = {"Clear target t:": "@cttime\r\n",
# "Clear target V:": "@ctvolume\r\n"}
# current_time = QtCore.QDateTime.currentDateTime().toString("[hh:mm:ss]")
# for key, value in self.run_commands_set_ButtonClear.items():
# # print(f"{current_time} >>{key}\r\n")
# if isinstance(self.check_serial_thread.ser, serial.Serial):
# # ui.commands_sent.append(f"{current_time} >>{key}")
# self.check_serial_thread.ser.write(value.encode(SendDataToPort.ENCODE_TYPE))
# QtCore.QCoreApplication.instance().processEvents()
# time.sleep(0.1)
# else:
# pass
#
# @staticmethod
# def set_encode_format(ui, encode_sender):
# if encode_sender == ui.actionUTF_8:
# SendDataToPort.ENCODE_TYPE = 'utf-8'
# elif encode_sender == ui.actionASCII:
# SendDataToPort.ENCODE_TYPE = 'ascii'
# return SendDataToPort.ENCODE_TYPE
#
# def send_thread_start(self, status):
# if status and status != '':
# self.return_status(status)
# self.start()
# super().start()
#
# def return_status(self, status):
# self.receive_status = status
# return status
#
#
# class ReadDataFromPort(QtCore.QThread):
# receive_status = QtCore.pyqtSignal(str)
# # read_running = QtCore.pyqtSignal(bool)
# # Enable selection of encoding/ decoding format
# DECODE_STYLE = 'NoLF' # 默认结尾标识：无换行符
# __LINE_FEED_TYPE = (b':', b'<', b'>', b'*', b'T*') # Default no line feed following end identifier
# DECODE_TYPE = 'utf-8'
#
# def __init__(self, ser, ui_main=None, parent=None):
# super().__init__(parent)
# self.mutex = QtCore.QMutex()
# self.mutex_sub = QtCore.QMutex()
# self.ui = ui_main
# self.ser = ser
# self.__response = None
# self.__RECEIVE_STATUS = None
# self.send_thread = None
# # self.receive_status.connect(self.print_receive_status)
# # self.read_running.connect(self.call_send_thread)
#
# @staticmethod
# def set_line_feed_style(ui, sender_check):
# if sender_check == ui.actionNo_line_feed:
# ReadDataFromPort.__LINE_FEED_TYPE = (b':', b'<', b'>', b'*', b'T*')
# ReadDataFromPort.DECODE_STYLE = 'NoLF'
# elif sender_check == ui.action_carrige_return:
# ReadDataFromPort.__LINE_FEED_TYPE = (b':\r', b'<\r', b'>\r', b'*\r', b'T*\r')
# ReadDataFromPort.DECODE_STYLE = 'CR'
# elif sender_check == ui.action_line_feed:
# ReadDataFromPort.__LINE_FEED_TYPE = (b':\n', b'<\n', b'>\n', b'*\n', b'T*\n')
# ReadDataFromPort.DECODE_STYLE = 'LF'
# elif sender_check == ui.action_CR_LF:
# ReadDataFromPort.__LINE_FEED_TYPE = (b':\r\n', b'<\r\n', b'>\r\n', b'*\r\n', b'T*\r\n')
# ReadDataFromPort.DECODE_STYLE = 'CR&LF'
# logger_debug_console.info(
# f"set_line_feed_style called! Current decoding format: {ReadDataFromPort.DECODE_STYLE}")
# logger_debug_console.info(f"当前结尾标识符: {ReadDataFromPort.__LINE_FEED_TYPE}")
# return ReadDataFromPort.__LINE_FEED_TYPE, ReadDataFromPort.DECODE_STYLE
#
# @staticmethod
# def decode_according_to_identifier(DECODE_STYLE, response):
# if not DECODE_STYLE or DECODE_STYLE == 'NoLF':
# return response.decode(ReadDataFromPort.DECODE_TYPE, 'replace')
# elif DECODE_STYLE == 'CR':
# return response.replace(b'\r', b'\r\n').decode(ReadDataFromPort.DECODE_TYPE).strip()
# elif DECODE_STYLE == 'LF' or DECODE_STYLE == 'CR&LF':
# return response.decode(ReadDataFromPort.DECODE_TYPE, 'replace').strip()
#
# def run(self):
# # print(self.ui)
# # print(self.ser)
# # print('ReadDataFromPort called!')
# # print('Run:', self.ser is None, self.connect_status)
# if self.ser is None:
# self.quit()
# return
# else:
# self.call_send_thread()
# pass
# # self.start_send_thread()
#
# while self.ser:
# self.mutex.lock()
# print('Read running: ', self.isRunning())
# current_time = QtCore.QDateTime.currentDateTime().toString("[hh:mm:ss]")
# response = self.read_single_line()
# # response = self.response
# # if response and response != b'':
# # print('response from run multi:', response)
# """不以(':', '>', '<', '*', 'T*')结尾的读取数据用来绘图"""
# if response and response != b'':
# # response_dec = response.decode('utf-8', 'replace') # Pump
# # response_dec = response.decode('utf-8', 'replace').strip() # 末尾包含\r或者\r\n
# # response_dec_rep = response.replace(b'\r', b'\r\n').decode('utf-8').strip() # 保证解码之后能够通过print()打印，然后解析
# # print('response_dec_rep', response_dec_rep)
# # print('response_dec from run multi:', response_dec)
# response_dec = self.decode_according_to_identifier(DECODE_STYLE=ReadDataFromPort.DECODE_STYLE,
# response=response)
# if response_dec.endswith(':'):
# self.receive_status.emit('Continue')
# # print(self.receive_status.signal)
# self.__RECEIVE_STATUS = 'Continue'
# print('self.receive_status_instance: ', self.__RECEIVE_STATUS)
# self.ui.Response_from_pump.append(f"{current_time} >>\n{response_dec}\n")
# # print(f"{current_time} >>\n{response_dec}\n")
# self.ui.Response_from_pump.moveCursor(QtGui.QTextCursor.MoveOperation.End)
# QtCore.QCoreApplication.instance().processEvents()
# elif response_dec.endswith('>'):
# self.receive_status.emit('INF running')
# # print('>>>>>>>>>>>>>', response_dec)
# self.ui.Response_from_pump.append(f"{current_time} >>\n{response_dec}\n")
# self.ui.Response_from_pump.moveCursor(QtGui.QTextCursor.MoveOperation.End)
# QtCore.QCoreApplication.instance().processEvents()
# elif response_dec.endswith('<'):
# self.receive_status.emit('WD running')
# # print('<<<<<<<<<<<<<<', response_dec)
# self.ui.Response_from_pump.append(f"{current_time} >>\n{response_dec}\n")
# self.ui.Response_from_pump.moveCursor(QtGui.QTextCursor.MoveOperation.End)
# QtCore.QCoreApplication.instance().processEvents()
# elif response_dec.endswith('*'):
# if response_dec[-2:] == 'T*':
# self.receive_status.emit('Target reached')
# self.ui.Response_from_pump.append(f"{current_time} >>\n{response_dec}\n")
# self.ui.Response_from_pump.moveCursor(QtGui.QTextCursor.MoveOperation.End)
# QtCore.QCoreApplication.instance().processEvents()
# else:
# self.receive_status.emit('STOP')
# self.ui.Response_from_pump.append(f"{current_time} >>\n{response_dec}\n")
# self.ui.Response_from_pump.moveCursor(QtGui.QTextCursor.MoveOperation.End)
# QtCore.QCoreApplication.instance().processEvents()
# else:
# # self.ui.Response_from_pump.append(f"{current_time} >>{response_dec}")
# # self.ui.Response_from_pump.moveCursor(QtGui.QTextCursor.MoveOperation.End)
# pass
# else:
# pass
# # 释放锁，避免阻塞其他线程的执行
# self.mutex.unlock()