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README.Rmd
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README.Rmd
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---
output: github_document
---
<!-- README.md is generated from README.Rmd. Please edit that file -->
```{r, include = FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
fig.path = "man/figures/README-",
out.width = "100%"
)
```
# SAMSE
<!-- badges: start -->
<!-- badges: end -->
![](man/figures/logo.png)
## Introduction
The [South Atlantic Fishery Management Council](https://safmc.net/) (SAFMC) is working with [Blue Matter Science Ltd.](https://www.bluematterscience.com/) to conduct a Management Strategy Evaluation (MSE) to describe the expected outcomes of different management approaches for the Snapper-Grouper Fishery.
This `SAMSE` R package includes all the code to run the MSE analysis. `SAMSE` builds age-structured, spatial and multispecies, operating models (OMs) from the output of Beaufort Assessment Models (BAM). The OMs are projected under forwarded different management scenarios and performance statistics are used to compare the performance of different management approaches.
`SAMSE` uses the [openMSE](https:://openMSE.com) platform to build the OMs and conduct the closed-loop simulation testing.
Documentation on building the OMs, specifying the management methods, and running the closed-loop simualation testing is available under the **Articles** menu on the top navigation bar.
## Installation
You can install the SAMSE from [GitHub](https://github.com/) with:
``` r
# install.packages("remotes")
remotes::install_github("Blue-Matter/SAFMC-MSE")
```
## MSE Technical Group Members
| Name| Email| Role|
|:--|:--|:--|
| Adrian Hordyk | [email protected] |Lead MSE Analyst |
| Quang Huynh | [email protected] |Supporting MSE Analyst |
| Tom Carruthers | [email protected] | Supporting MSE Analyst |
| Chip Collier | [email protected] | SAFMC Lead |
| Cassidy Peterson | [email protected] | MSE Specialist |
| Erik Williams | [email protected] | Stock Assessment Specialist |
| Christina Wiegand | [email protected] | Social Scientist |
| Scott Crosson | [email protected] | Economist |
| Mike Larkin | [email protected] | Data Analyst |
| Kai Lorenzen | [email protected] | Meeting Moderator/Facilitator |
| Mike Schmidtke | [email protected] | SAFMC Fishery Scientist |
| Judd Curtis | [email protected] | SAFMC Fishery Scientist |
| Allie Iberle | [email protected] | SAFMC Fishery Scientist |