From 75951a299fadac86a968c33b8da5ffb1565d8a79 Mon Sep 17 00:00:00 2001 From: nilseling Date: Thu, 19 Oct 2023 16:03:21 +0200 Subject: [PATCH] Updated citation --- README.md | 21 ++++++++++----------- docs/index.md | 21 +++++++++++---------- 2 files changed, 21 insertions(+), 21 deletions(-) diff --git a/README.md b/README.md index bffb898..1e1d91f 100644 --- a/README.md +++ b/README.md @@ -84,16 +84,15 @@ To contribute to this work, please fork the repository, make changes to it and o ## Citation -If you use this workflow for your research, please cite us: +Please cite the following paper when using this workflow in your research: -``` -@misc{ImcSegmentationPipeline, - author = {Vito RT Zanotelli, Bernd Bodenmiller}, - title = {{ImcSegmentationPipeline: A pixel-classification based multiplexed image segmentation pipeline}}, - year = 2022, - doi = {10.5281/zenodo.3841961}, - version = {3.0}, - publisher = {Zenodo}, - url = {https://doi.org/10.5281/zenodo.3841961} +> Windhager, J., Zanotelli, V.R.T., Schulz, D. et al. An end-to-end workflow for multiplexed image processing and analysis. Nat Protoc (2023). https://doi.org/10.1038/s41596-023-00881-0 + + @article{Windhager2023, + author = {Windhager, Jonas and Zanotelli, Vito R.T. and Schulz, Daniel and Meyer, Lasse and Daniel, Michelle and Bodenmiller, Bernd and Eling, Nils}, + title = {An end-to-end workflow for multiplexed image processing and analysis}, + year = {2023}, + doi = {10.1038/s41596-023-00881-0}, + URL = {https://www.nature.com/articles/s41596-023-00881-0}, + journal = {Nature Protocols} } -``` diff --git a/docs/index.md b/docs/index.md index 89cd163..fe54af0 100644 --- a/docs/index.md +++ b/docs/index.md @@ -116,14 +116,15 @@ For downstream analysis in `R`, please refer to the [IMC Data Analysis](https:// ## Citation -``` -@misc{ImcSegmentationPipeline, - author = {Vito RT Zanotelli, Bernd Bodenmiller}, - title = {{ImcSegmentationPipeline: A pixel-classification based multiplexed image segmentation pipeline}}, - year = 2022, - doi = {10.5281/zenodo.3841961}, - version = {3.0}, - publisher = {Zenodo}, - url = {https://doi.org/10.5281/zenodo.3841961} +Please cite the following paper when using this workflow in your research: + +> Windhager, J., Zanotelli, V.R.T., Schulz, D. et al. An end-to-end workflow for multiplexed image processing and analysis. Nat Protoc (2023). https://doi.org/10.1038/s41596-023-00881-0 + + @article{Windhager2023, + author = {Windhager, Jonas and Zanotelli, Vito R.T. and Schulz, Daniel and Meyer, Lasse and Daniel, Michelle and Bodenmiller, Bernd and Eling, Nils}, + title = {An end-to-end workflow for multiplexed image processing and analysis}, + year = {2023}, + doi = {10.1038/s41596-023-00881-0}, + URL = {https://www.nature.com/articles/s41596-023-00881-0}, + journal = {Nature Protocols} } -```