From f01b1eccd5631b4c16a41369347301b6bf22e09b Mon Sep 17 00:00:00 2001 From: Jack Wang Date: Wed, 13 Nov 2024 12:33:25 -0500 Subject: [PATCH 1/5] 14569 prt mappings (#16236) * device * relatedperson * prt extension and pln * device to prt * fixes to existing mappings * update existing tests --- .../hl7/codesystem/ExtensionUrlMapping.yml | 4 + .../catchall/hl7/datatypes/CX/Identifier.yml | 2 - .../HL7/catchall/hl7/datatypes/DR/Period.yml | 8 +- .../hl7/datatypes/EI/Device-udiCarrier.yml | 8 + .../catchall/hl7/datatypes/EI/Identifier.yml | 1 + .../HD/ExtensionAssigningAuthority.yml | 9 +- .../catchall/hl7/datatypes/HD/Location.yml | 10 +- .../catchall/hl7/datatypes/PLN/Identifier.yml | 47 + .../hl7/datatypes/XCN/Practitioner.yml | 13 + .../hl7/datatypes/XCN/RelatedPerson.yml | 183 + .../hl7/datatypes/XCN/XCNExtension.yml | 2 +- .../HL7/catchall/hl7/resource/deprecated.md | 6 - .../catchall/hl7/segments/OBX/Observation.yml | 2 +- .../HL7/catchall/hl7/segments/PRT/Device.yml | 108 +- .../hl7/segments/PRT/PRTExtension.yml | 293 + .../hl7/segments/PRT/PractitionerRole.yml | 78 + .../hl7/segments/PRT/RelatedPerson.yml | 210 + .../hl7_mapping/datatypes/identifier/PLN.yml | 23 + .../hl7_mapping/resources/Device/PRT.yml | 43 + .../resources/Device/PRTExtension.yml | 95 + .../Expected_FHIR_to_FHIR_FULLELR.fhir | 25871 +++++------ .../Expected_FHIR_to_FHIR_MARSOTC.fhir | 1028 +- .../Expected_HL7_to_FHIR_FULLELR.fhir | 35786 +++++++--------- .../Expected_HL7_to_FHIR_MARSOTC.fhir | 1400 +- .../catchall/obx/OBXToObservationTests.kt | 18 + .../catchall/prt/PRTToDeviceTests.kt | 11 + .../catchall/xpn/XPNtoHumanNameTests.kt | 6 +- .../HL7_to_FHIR/sample_oml_20240319-001.fhir | 1838 +- ...mple_orm_20230809-001-with-enrichment.fhir | 1780 +- .../HL7_to_FHIR/sample_orm_20230809-001.fhir | 1776 +- .../catchall/dr/dr-to-period.fhir | 680 +- .../catchall/ei/EI-to-Device-UDI-Carrier.fhir | 330 +- ...extensionAssigningAuthority-empty-hd3.fhir | 315 +- ...BX-to-Observation-obx-33-no-extension.fhir | 447 + ...OBX-to-Observation-obx-33-no-extension.hl7 | 5 + .../obx/OBX-to-Observation-obx-33.fhir | 481 + .../obx/OBX-to-Observation-obx-33.hl7 | 5 + .../catchall/prt/prt-to-device.fhir | 1172 + .../catchall/prt/prt-to-device.hl7 | 4 + .../xad/xad-to-address-uses-xad12.fhir | 728 +- ...tioner-xcn17-populated-xcn19-20-empty.fhir | 854 +- ...anname-xpn10-populated-xpn12-13-empty.fhir | 722 +- 42 files changed, 35960 insertions(+), 40442 deletions(-) create mode 100644 prime-router/metadata/HL7/catchall/hl7/datatypes/PLN/Identifier.yml create mode 100644 prime-router/metadata/HL7/catchall/hl7/datatypes/XCN/RelatedPerson.yml delete mode 100644 prime-router/metadata/HL7/catchall/hl7/resource/deprecated.md create mode 100644 prime-router/metadata/HL7/catchall/hl7/segments/PRT/PRTExtension.yml create mode 100644 prime-router/metadata/HL7/catchall/hl7/segments/PRT/PractitionerRole.yml create mode 100644 prime-router/metadata/HL7/catchall/hl7/segments/PRT/RelatedPerson.yml create mode 100644 prime-router/src/main/resources/metadata/hl7_mapping/datatypes/identifier/PLN.yml create mode 100644 prime-router/src/main/resources/metadata/hl7_mapping/resources/Device/PRTExtension.yml create mode 100644 prime-router/src/testIntegration/kotlin/datatests/mappinginventory/catchall/prt/PRTToDeviceTests.kt create mode 100644 prime-router/src/testIntegration/resources/datatests/mappinginventory/catchall/obx/OBX-to-Observation-obx-33-no-extension.fhir create mode 100644 prime-router/src/testIntegration/resources/datatests/mappinginventory/catchall/obx/OBX-to-Observation-obx-33-no-extension.hl7 create mode 100644 prime-router/src/testIntegration/resources/datatests/mappinginventory/catchall/obx/OBX-to-Observation-obx-33.fhir create mode 100644 prime-router/src/testIntegration/resources/datatests/mappinginventory/catchall/obx/OBX-to-Observation-obx-33.hl7 create mode 100644 prime-router/src/testIntegration/resources/datatests/mappinginventory/catchall/prt/prt-to-device.fhir create mode 100644 prime-router/src/testIntegration/resources/datatests/mappinginventory/catchall/prt/prt-to-device.hl7 diff --git a/prime-router/metadata/HL7/catchall/hl7/codesystem/ExtensionUrlMapping.yml b/prime-router/metadata/HL7/catchall/hl7/codesystem/ExtensionUrlMapping.yml index 036bfc35a8c..2643e984fed 100644 --- a/prime-router/metadata/HL7/catchall/hl7/codesystem/ExtensionUrlMapping.yml +++ b/prime-router/metadata/HL7/catchall/hl7/codesystem/ExtensionUrlMapping.yml @@ -209,6 +209,10 @@ - id: "obx-observation" url: "https://reportstream.cdc.gov/fhir/StructureDefinition/obx-observation" +# PRT +- id: "prt-extension" + url: "https://reportstream.cdc.gov/fhir/StructureDefinition/prt-extension" + # SPM -> Specimen - id: "specimen-source-site-modifier" url: "https://reportstream.cdc.gov/fhir/StructureDefinition/specimen-source-site-modifier" diff --git a/prime-router/metadata/HL7/catchall/hl7/datatypes/CX/Identifier.yml b/prime-router/metadata/HL7/catchall/hl7/datatypes/CX/Identifier.yml index d2fccdb2978..7f8e9fcbd90 100644 --- a/prime-router/metadata/HL7/catchall/hl7/datatypes/CX/Identifier.yml +++ b/prime-router/metadata/HL7/catchall/hl7/datatypes/CX/Identifier.yml @@ -1,7 +1,5 @@ # $schema: ./../../../../../json_schema/fhir/hl7-to-fhir-mapping-resource-template.json -resourceType: Identifier - value: type: STRING valueOf: CX.1 diff --git a/prime-router/metadata/HL7/catchall/hl7/datatypes/DR/Period.yml b/prime-router/metadata/HL7/catchall/hl7/datatypes/DR/Period.yml index 3bd35c02746..761aa2800d0 100644 --- a/prime-router/metadata/HL7/catchall/hl7/datatypes/DR/Period.yml +++ b/prime-router/metadata/HL7/catchall/hl7/datatypes/DR/Period.yml @@ -9,7 +9,7 @@ start: dateTimeIn: $start _start: expressionType: nested - condition: $dateTimeIn NOT_NULL + condition: $start NOT_NULL expressionsMap: extension_1: generateList: true @@ -20,7 +20,7 @@ _start: value: hl7v2-date-time valueString: type: STRING - valueOf: $dateTimeIn + valueOf: $start expressionType: HL7Spec end: @@ -32,7 +32,7 @@ end: dateTimeIn: $end _end: expressionType: nested - condition: $dateTimeOut NOT_NULL + condition: $end NOT_NULL expressionsMap: extension_1: generateList: true @@ -43,5 +43,5 @@ _end: value: hl7v2-date-time valueString: type: STRING - valueOf: $dateTimeOut + valueOf: $end expressionType: HL7Spec \ No newline at end of file diff --git a/prime-router/metadata/HL7/catchall/hl7/datatypes/EI/Device-udiCarrier.yml b/prime-router/metadata/HL7/catchall/hl7/datatypes/EI/Device-udiCarrier.yml index a21aa4af019..f66209a6613 100644 --- a/prime-router/metadata/HL7/catchall/hl7/datatypes/EI/Device-udiCarrier.yml +++ b/prime-router/metadata/HL7/catchall/hl7/datatypes/EI/Device-udiCarrier.yml @@ -8,6 +8,11 @@ deviceIdentifier: extension: expressionType: nested generateList: true + vars: + ei2: EI.2 + ei3: EI.3 + ei4: EI.4 + condition: $ei2 NOT_NULL || $ei3 NOT_NULL || $ei4 NOT_NULL expressions: - expressionType: nested expressionsMap: @@ -19,6 +24,7 @@ extension: expressionType: nested expressions: - expressionType: nested + condition: $ei2 NOT_NULL expressionsMap: url: type: SYSTEM_URL @@ -28,6 +34,7 @@ extension: expressionType: HL7Spec valueOf: EI.2 - expressionType: nested + condition: $ei3 NOT_NULL expressionsMap: url: type: SYSTEM_URL @@ -37,6 +44,7 @@ extension: expressionType: HL7Spec valueOf: EI.3 - expressionType: nested + condition: $ei4 NOT_NULL expressionsMap: url: type: SYSTEM_URL diff --git a/prime-router/metadata/HL7/catchall/hl7/datatypes/EI/Identifier.yml b/prime-router/metadata/HL7/catchall/hl7/datatypes/EI/Identifier.yml index 08af91e97c4..a8b9825f1d6 100644 --- a/prime-router/metadata/HL7/catchall/hl7/datatypes/EI/Identifier.yml +++ b/prime-router/metadata/HL7/catchall/hl7/datatypes/EI/Identifier.yml @@ -29,6 +29,7 @@ extension_1-assigning-authority: ei2: EI.2 ei3: EI.3 ei4: EI.4 + condition: $ei2 NOT_NULL || $ei3 NOT_NULL || $ei4 NOT_NULL expressionsMap: url: type: SYSTEM_URL diff --git a/prime-router/metadata/HL7/catchall/hl7/datatypes/HD/ExtensionAssigningAuthority.yml b/prime-router/metadata/HL7/catchall/hl7/datatypes/HD/ExtensionAssigningAuthority.yml index e2d9da0382d..0a8c6188f19 100644 --- a/prime-router/metadata/HL7/catchall/hl7/datatypes/HD/ExtensionAssigningAuthority.yml +++ b/prime-router/metadata/HL7/catchall/hl7/datatypes/HD/ExtensionAssigningAuthority.yml @@ -33,6 +33,9 @@ extension_2-universalId: extension_3-universalIdType: generateList: true + vars: + universalIdType: String, HD.3 + condition: $universalIdType NOT_NULL expressionType: nested expressionsMap: url: @@ -44,7 +47,7 @@ extension_3-universalIdType: expressionType: HL7Spec extension_4-universalIdUnknownType: - condition: $universalIdType NOT_EQUALS ISO && $universalIdType NOT_EQUALS UUID + condition: $universalId NOT_NULL && $universalIdType NOT_EQUALS ISO && $universalIdType NOT_EQUALS UUID generateList: true expressionType: nested expressionsMap: @@ -56,10 +59,11 @@ extension_4-universalIdUnknownType: valueOf: HD.2 expressionType: HL7Spec vars: + universalId: String, HD.2 universalIdType: String, HD.3 extension_5-universalIdUnknownType: - condition: $universalIdType NULL + condition: $universalId NOT_NULL && $universalIdType NULL generateList: true expressionType: nested expressionsMap: @@ -71,4 +75,5 @@ extension_5-universalIdUnknownType: valueOf: HD.2 expressionType: HL7Spec vars: + universalId: String, HD.2 universalIdType: String, HD.3 \ No newline at end of file diff --git a/prime-router/metadata/HL7/catchall/hl7/datatypes/HD/Location.yml b/prime-router/metadata/HL7/catchall/hl7/datatypes/HD/Location.yml index 73ccbe8759e..fb6997dccf7 100644 --- a/prime-router/metadata/HL7/catchall/hl7/datatypes/HD/Location.yml +++ b/prime-router/metadata/HL7/catchall/hl7/datatypes/HD/Location.yml @@ -25,7 +25,7 @@ identifier_1: valueOf: HD.2 extension_1-unknownUniversalIdType: - condition: $universalId NOT_EQUALS ISO && $universalId NOT_EQUALS UUID + condition: $universalId NOT_NULL && $universalIdType NOT_EQUALS ISO && $universalIdType NOT_EQUALS UUID generateList: true expressionType: nested expressionsMap: @@ -37,10 +37,11 @@ extension_1-unknownUniversalIdType: type: STRING valueOf: HD.2 vars: - universalId: STRING, HD.3 + universalId: String, HD.2 + universalIdType: STRING, HD.3 extension_2-unknownUniversalIdType: - condition: $universalId NULL + condition: $universalId NOT_NULL && $universalIdType NULL generateList: true expressionType: nested expressionsMap: @@ -52,7 +53,8 @@ extension_2-unknownUniversalIdType: type: STRING valueOf: HD.2 vars: - universalId: STRING, HD.3 + universalId: String, HD.2 + universalIdType: STRING, HD.3 extension_3-universalIdType: generateList: true diff --git a/prime-router/metadata/HL7/catchall/hl7/datatypes/PLN/Identifier.yml b/prime-router/metadata/HL7/catchall/hl7/datatypes/PLN/Identifier.yml new file mode 100644 index 00000000000..7ce92b597d2 --- /dev/null +++ b/prime-router/metadata/HL7/catchall/hl7/datatypes/PLN/Identifier.yml @@ -0,0 +1,47 @@ +# $schema: ./../../../../../json_schema/fhir/hl7-to-fhir-mapping-resource-template.json + +value: + type: STRING + valueOf: PLN.1 + expressionType: HL7Spec + +type: + valueOf: datatypes/CWE/CodeableConcept + specs: PLN.2 + expressionType: resource + +period: + vars: + endDate: PLN.4 + condition: $endDate NOT_NULL + expressionType: nested + expressionsMap: + end: + valueOf: "GeneralUtils.dateTimeWithZoneId(endDate,ZONEID)" + expressionType: JEXL + _end: + expressionType: nested + expressionsMap: + extension_1: + generateList: true + expressionType: nested + expressionsMap: + url: + type: SYSTEM_URL + value: hl7v2-date-time + valueString: + type: STRING + valueOf: $endDate + expressionType: HL7Spec + +extension: + generateList: true + expressionType: nested + expressionsMap: + url: + type: STRING + value: PLN.3 + valueString: + type: STRING + expressionType: HL7Spec + valueOf: PLN.3 \ No newline at end of file diff --git a/prime-router/metadata/HL7/catchall/hl7/datatypes/XCN/Practitioner.yml b/prime-router/metadata/HL7/catchall/hl7/datatypes/XCN/Practitioner.yml index 16a8a174270..0dce3373b9c 100644 --- a/prime-router/metadata/HL7/catchall/hl7/datatypes/XCN/Practitioner.yml +++ b/prime-router/metadata/HL7/catchall/hl7/datatypes/XCN/Practitioner.yml @@ -17,6 +17,7 @@ identifier: xcn11: String, XCN.11 xcn12: String, XCN.12 xcn13: String, XCN.13 + xcn14: String, XCN.14 expressionsMap: value: type: STRING @@ -88,6 +89,18 @@ identifier: valueOf: XCN.12 type: STRING expressionType: HL7Spec + extension_3-assigningFacility: + condition: $xcn14 NOT_NULL + generateList: true + expressionType: nested + expressionsMap: + url: + type: SYSTEM_URL + value: identifier-location + valueReference: + expressionType: reference + valueOf: datatypes/HD/Location + specs: XCN.14 name: expressionType: nested diff --git a/prime-router/metadata/HL7/catchall/hl7/datatypes/XCN/RelatedPerson.yml b/prime-router/metadata/HL7/catchall/hl7/datatypes/XCN/RelatedPerson.yml new file mode 100644 index 00000000000..f2e183a36e1 --- /dev/null +++ b/prime-router/metadata/HL7/catchall/hl7/datatypes/XCN/RelatedPerson.yml @@ -0,0 +1,183 @@ +# $schema: ./../../../../../json_schema/fhir/hl7-to-fhir-mapping-resource-template.json + +resourceType: RelatedPerson + +id: + type: STRING + valueOf: "GeneralUtils.generateResourceId()" + expressionType: JEXL + +identifier: + expressionType: nested + vars: + xcn11: String, XCN.11 + xcn12: String, XCN.12 + xcn13: String, XCN.13 + xcn14: String, XCN.14 + expressionsMap: + value: + type: STRING + valueOf: XCN.1 + expressionType: HL7Spec + type: + condition: $xcn13 NOT_NULL + expressionType: resource + specs: XCN.13 + valueOf: datatypes/ID/CodeableConcept + extension_1-checkDigit: + condition: $xcn11 NOT_NULL + generateList: true + expressionType: nested + expressionsMap: + url: + type: SYSTEM_URL + value: identifier-check-digit + valueString: + type: STRING + expressionType: HL7Spec + valueOf: XCN.11 + extension_2-checkDigitScheme: + condition: $xcn12 NOT_NULL + generateList: true + expressionType: nested + expressionsMap: + url: + type: SYSTEM_URL + value: naming-system-check-digit + valueCode: + valueOf: XCN.12 + type: STRING + expressionType: HL7Spec + extension_3-assigningFacility: + condition: $xcn14 NOT_NULL + generateList: true + expressionType: nested + expressionsMap: + url: + type: SYSTEM_URL + value: identifier-location + valueReference: + expressionType: reference + valueOf: datatypes/HD/Location + specs: XCN.14 + +name: + expressionType: nested + expressionsMap: + family: + type: STRING + valueOf: XCN.2.1 + expressionType: HL7Spec + _family: + expressionType: resource + valueOf: datatypes/FN/ExtensionHumanName-family + specs: XCN.2 + given: + generateList: true + expressionType: nested + expressions: + - expressionType: HL7Spec + valueOf: XCN.3 + type: STRING + - expressionType: HL7Spec + valueOf: XCN.4 + type: STRING + suffix: + generateList: true + expressionType: nested + expressions: + - expressionType: HL7Spec + valueOf: XCN.5 + type: STRING + - expressionType: HL7Spec + valueOf: XCN.7 + type: STRING + - expressionType: HL7Spec + valueOf: XCN.21 + type: STRING + prefix: + type: STRING + valueOf: XCN.6 + expressionType: HL7Spec + use: + type: NAME_USE + valueOf: XCN.10 + expressionType: HL7Spec + # This needs to use variables because the message parses this field using NULLDT since it is deprecated which means that + # the values do not get correctly loaded and will not be mapped over correctly using a spec. + period_1: + vars: + xcn19: String, XCN.19 + xcn20: String, XCN.20 + start: String, XCN.17.1 + end: String, XCN.17.2 + condition: $xcn19 NULL && $xcn20 NULL + expressionType: resource + valueOf: datatypes/DR/Period + # XCN.17 is deprecated so the schema favors using XCN.19/20 if either are populated + period_2: + vars: + xcn19: String, XCN.19 + xcn20: String, XCN.20 + condition: $xcn19 NOT_NULL || $xcn20 NOT_NULL + expressionType: nested + expressionsMap: + start: + valueOf: "GeneralUtils.dateTimeWithZoneId(periodStart,ZONEID)" + expressionType: JEXL + vars: + periodStart: XCN.19 + end: + valueOf: "GeneralUtils.dateTimeWithZoneId(periodEnd,ZONEID)" + expressionType: JEXL + vars: + periodEnd: XCN.20 + extension_AssemblyOrder: + expressionType: nested + generateList: true + vars: + xcn18: String, XCN.18 + condition: $xcn18 NOT_NULL + expressions: + - expressionType: nested + expressionsMap: + url: + type: SYSTEM_URL + value: humanname-assembly-order + valueCode: + type: STRING + valueOf: XCN.18 + expressionType: HL7Spec + +extension: + vars: + xcn9: STRING_ALL, XCN.9 + generateList: true + expressionType: nested + expressions: + - expressionType: resource + condition: $xcn9 NOT_NULL + valueOf: datatypes/HD/ExtensionAssigningAuthority + specs: XCN.9 + - expressionType: resource + valueOf: datatypes/XCN/XCNExtension + - generateList: true + expressionType: nested + condition: $XCNHL7Field NOT_NULL + expressionsMap: + url: + type: SYSTEM_URL + value: hl7v2Field + valueString: + type: STRING + valueOf: $XCNHL7Field + - generateList: true + expressionType: nested + condition: $XCNHL7Component NOT_NULL + expressionsMap: + url: + type: SYSTEM_URL + value: hl7v2Component + valueString: + type: STRING + valueOf: $XCNHL7Component \ No newline at end of file diff --git a/prime-router/metadata/HL7/catchall/hl7/datatypes/XCN/XCNExtension.yml b/prime-router/metadata/HL7/catchall/hl7/datatypes/XCN/XCNExtension.yml index 08595a04b9d..955ba8239c5 100644 --- a/prime-router/metadata/HL7/catchall/hl7/datatypes/XCN/XCNExtension.yml +++ b/prime-router/metadata/HL7/catchall/hl7/datatypes/XCN/XCNExtension.yml @@ -15,7 +15,7 @@ extension: xcn8: STRING_ALL, XCN.8 xcn9: STRING_ALL, XCN.9 xcn10: String, XCN.10 - xcn15: String, XCN.12 + xcn15: String, XCN.15 xcn16: STRING_ALL, XCN.16 xcn17: STRING_ALL, XCN.17 xcn19: String, XCN.19 diff --git a/prime-router/metadata/HL7/catchall/hl7/resource/deprecated.md b/prime-router/metadata/HL7/catchall/hl7/resource/deprecated.md deleted file mode 100644 index c2a958f19c5..00000000000 --- a/prime-router/metadata/HL7/catchall/hl7/resource/deprecated.md +++ /dev/null @@ -1,6 +0,0 @@ -## Deprecated location - -Use of this location for mapping schema is deprecated. Please see -the [Mapping schema file structure](../../../../docs/design/design/mapping-schemas.md) design document to review current -mapping schema structure guidelines. New work should follow the new design as much as possible. When mapping work is -completed, this directory should be removed. \ No newline at end of file diff --git a/prime-router/metadata/HL7/catchall/hl7/segments/OBX/Observation.yml b/prime-router/metadata/HL7/catchall/hl7/segments/OBX/Observation.yml index c7be226e804..b11a987660a 100644 --- a/prime-router/metadata/HL7/catchall/hl7/segments/OBX/Observation.yml +++ b/prime-router/metadata/HL7/catchall/hl7/segments/OBX/Observation.yml @@ -16,7 +16,7 @@ resourceType: Observation # Not implementing OBX.29 not in mapping not in NIST # Not implementing OBX.31 not in mapping not in NIST # Not implementing OBX.32 not in mapping not in NIST -# Not implementing OBX.33 as it's not in the NIST spec the logic in the inventory cannot be implemented in the library +# OBX.33 is repeatable but maps to specimen on Observation which is not, so it's all captured in OBXExtension id: diff --git a/prime-router/metadata/HL7/catchall/hl7/segments/PRT/Device.yml b/prime-router/metadata/HL7/catchall/hl7/segments/PRT/Device.yml index 61ab4500d91..54b994b6aff 100644 --- a/prime-router/metadata/HL7/catchall/hl7/segments/PRT/Device.yml +++ b/prime-router/metadata/HL7/catchall/hl7/segments/PRT/Device.yml @@ -1,6 +1,7 @@ # $schema: ./../../../../../json_schema/fhir/hl7-to-fhir-mapping-resource-template.json # This segment does not appear in NIST or RADx MARS +# PRT.2 - inventory indicates to check for "D" but the correct HL7v2 table value is "DE" resourceType: Device @@ -9,10 +10,109 @@ id: valueOf: "GeneralUtils.generateResourceId()" expressionType: JEXL +status: + vars: + prt2: PRT.2 + condition: $prt2 EQUALS "DE" + type: STRING + value: "inactive" + udiCarrier: - valueOf: datatypes/EI/Device-udiCarrier + expressionType: nested + generateList: true + vars: + prt10: STRING_ALL, PRT.10 + prt16: STRING_ALL, PRT.16 + expressions: + - expressionType: resource + condition: $prt10 NOT_NULL + valueOf: datatypes/EI/Device-udiCarrier + generateList: true + specs: PRT.10 * + constants: + hl7v2Field: "PRT.10" + - expressionType: resource + condition: $prt16 NOT_NULL + valueOf: datatypes/EI/Device-udiCarrier + specs: PRT.16 + constants: + hl7v2Field: "PRT.16" + +manufactureDate: + type: STRING + valueOf: "GeneralUtils.dateTimeWithZoneId(dateTimeIn,ZONEID)" + expressionType: JEXL + vars: + dateTimeIn: PRT.17 +_manufactureDate: + expressionType: nested + vars: + dateTimeIn: PRT.17 + condition: $dateTimeIn NOT_NULL + expressionsMap: + extension_1: + generateList: true + expressionType: nested + expressionsMap: + url: + type: SYSTEM_URL + value: hl7v2-date-time + valueString: + type: STRING + valueOf: $dateTimeIn + expressionType: HL7Spec + +expirationDate: + type: STRING + valueOf: "GeneralUtils.dateTimeWithZoneId(dateTimeIn,ZONEID)" + expressionType: JEXL + vars: + dateTimeIn: PRT.18 +_expirationDate: + expressionType: nested + vars: + dateTimeIn: PRT.18 + condition: $dateTimeIn NOT_NULL + expressionsMap: + extension_1: + generateList: true + expressionType: nested + expressionsMap: + url: + type: SYSTEM_URL + value: hl7v2-date-time + valueString: + type: STRING + valueOf: $dateTimeIn + expressionType: HL7Spec + +lotNumber: + type: STRING + valueOf: PRT.19 + expressionType: HL7Spec + +serialNumber: + type: STRING + valueOf: PRT.20 + expressionType: HL7Spec + +distinctIdentifier: + type: STRING + valueOf: PRT.21 + expressionType: HL7Spec +_distinctIdentifier: + valueOf: datatypes/EI/Identifier + expressionType: resource + specs: PRT.21 + +type: + valueOf: datatypes/CNE/CodeableConcept + specs: PRT.22 expressionType: resource + +extension: generateList: true - specs: PRT.10 - constants: - hl7v2Field: "PRT.10" + expressionType: nested + expressions: + - expressionType: resource + valueOf: segments/PRT/PRTExtension \ No newline at end of file diff --git a/prime-router/metadata/HL7/catchall/hl7/segments/PRT/PRTExtension.yml b/prime-router/metadata/HL7/catchall/hl7/segments/PRT/PRTExtension.yml new file mode 100644 index 00000000000..f6a0fa36a7e --- /dev/null +++ b/prime-router/metadata/HL7/catchall/hl7/segments/PRT/PRTExtension.yml @@ -0,0 +1,293 @@ +# $schema: ./../../../../../json_schema/fhir/hl7-to-fhir-mapping-resource-template.json + +url: + type: SYSTEM_URL + value: prt-extension + +extension: + generateList: true + expressionType: nested + expressions: + - expressionType: nested + vars: + prt2: STRING_ALL, PRT.2 + condition: $prt2 NOT_NULL + expressionsMap: + url: + value: PRT.2 + type: STRING + valueId: + type: STRING + expressionType: HL7Spec + valueOf: PRT.2 + - expressionType: nested + vars: + prt3: STRING_ALL, PRT.3 + condition: $prt3 NOT_NULL + expressionsMap: + url: + value: PRT.3 + type: STRING + valueCodeableConcept: + valueOf: datatypes/CWE/CodeableConcept + specs: PRT.3 + expressionType: resource + - expressionType: nested + vars: + prt4: STRING_ALL, PRT.4 + condition: $prt4 NOT_NULL + expressionsMap: + url: + value: PRT.4 + type: STRING + valueCodeableConcept: + valueOf: datatypes/CWE/CodeableConcept + specs: PRT.4 + expressionType: resource + - expressionType: nested + vars: + prt5: STRING_ALL, PRT.5 + condition: $prt5 NOT_NULL + specs: PRT.5 * + generateList: true + expressionsMap: + url: + type: STRING + value: PRT.5 + valueReference: + valueOf: datatypes/XCN/RelatedPerson + expressionType: reference + - expressionType: nested + vars: + prt6: STRING_ALL, PRT.6 + condition: $prt6 NOT_NULL + expressionsMap: + url: + value: PRT.6 + type: STRING + valueCodeableConcept: + valueOf: datatypes/CWE/CodeableConcept + specs: PRT.6 + expressionType: resource + - expressionType: nested + vars: + prt7: STRING_ALL, PRT.7 + condition: $prt7 NOT_NULL + expressionsMap: + url: + value: PRT.7 + type: STRING + valueCodeableConcept: + valueOf: datatypes/CWE/CodeableConcept + specs: PRT.7 + expressionType: resource + - expressionType: nested + vars: + prt8: STRING_ALL, PRT.8 + condition: $prt8 NOT_NULL + generateList: true + specs: PRT.8 * + expressionsMap: + url: + type: STRING + value: PRT.8 + valueReference: + valueOf: datatypes/XON/Organization + expressionType: reference + - expressionType: nested + vars: + prt9: STRING_ALL, PRT.9 + condition: $prt9 NOT_NULL + generateList: true + specs: PRT.9 * + expressionsMap: + url: + type: STRING + value: PRT.9 + valueReference: + valueOf: datatypes/PL/Location + expressionType: reference + - expressionType: nested + vars: + prt10: STRING_ALL, PRT.10 + condition: $prt10 NOT_NULL + generateList: true + specs: PRT.10 * + expressionsMap: + url: + type: STRING + value: PRT.10 + valueIdentifier: + valueOf: datatypes/EI/Device-udiCarrier + expressionType: resource + - expressionType: nested + vars: + prt11: STRING, PRT.11 + condition: $prt11 NOT_NULL + expressionsMap: + url: + value: PRT.11 + type: STRING + valueString: + type: STRING + expressionType: HL7Spec + valueOf: PRT.11 + - expressionType: nested + vars: + prt12: STRING, PRT.12 + condition: $prt12 NOT_NULL + expressionsMap: + url: + value: PRT.12 + type: STRING + valueString: + type: STRING + expressionType: HL7Spec + valueOf: PRT.12 + - expressionType: nested + vars: + prt13: STRING_ALL, PRT.13 + condition: $prt13 NOT_NULL + expressionsMap: + url: + value: PRT.13 + type: STRING + valueCodeableConcept: + valueOf: datatypes/CWE/CodeableConcept + specs: PRT.13 + expressionType: resource + - expressionType: nested + vars: + prt14: STRING_ALL, PRT.14 + condition: $prt14 NOT_NULL + specs: PRT.14 * + generateList: true + expressionsMap: + url: + type: STRING + value: PRT.14 + valueAddress: + expressionType: resource + valueOf: datatypes/XAD/Address + - expressionType: nested + vars: + prt15: STRING_ALL, PRT.15 + condition: $prt15 NOT_NULL + specs: PRT.15 * + generateList: true + expressionsMap: + url: + type: STRING + value: PRT.15 + valueAddress: + expressionType: resource + valueOf: datatypes/XTN/ContactPoint + - expressionType: nested + vars: + prt16: STRING_ALL, PRT.16 + condition: $prt16 NOT_NULL + expressionsMap: + url: + value: PRT.16 + type: STRING + valueIdentifier: + valueOf: datatypes/EI/Device-udiCarrier + specs: PRT.16 + expressionType: resource + - expressionType: nested + vars: + prt17: STRING, PRT.17 + condition: $prt17 NOT_NULL + expressionsMap: + url: + value: PRT.17 + type: STRING + valueString: + type: STRING + expressionType: HL7Spec + valueOf: PRT.17 + - expressionType: nested + vars: + prt18: STRING, PRT.18 + condition: $prt18 NOT_NULL + expressionsMap: + url: + value: PRT.18 + type: STRING + valueString: + type: STRING + expressionType: HL7Spec + valueOf: PRT.18 + - expressionType: nested + vars: + prt19: STRING, PRT.19 + condition: $prt19 NOT_NULL + expressionsMap: + url: + value: PRT.19 + type: STRING + valueString: + type: STRING + expressionType: HL7Spec + valueOf: PRT.19 + - expressionType: nested + vars: + prt20: STRING, PRT.20 + condition: $prt20 NOT_NULL + expressionsMap: + url: + value: PRT.20 + type: STRING + valueString: + type: STRING + expressionType: HL7Spec + valueOf: PRT.20 + - expressionType: nested + vars: + prt21: STRING_ALL, PRT.21 + condition: $prt21 NOT_NULL + expressionsMap: + url: + value: PRT.21 + type: STRING + valueIdentifier: + valueOf: datatypes/EI/Identifier + specs: PRT.21 + expressionType: resource + - expressionType: nested + vars: + prt22: STRING_ALL, PRT.22 + condition: $prt22 NOT_NULL + expressionsMap: + url: + value: PRT.22 + type: STRING + valueCodeableConcept: + valueOf: datatypes/CNE/CodeableConcept + specs: PRT.22 + expressionType: resource + - expressionType: nested + vars: + prt23: STRING_ALL, PRT.23 + condition: $prt23 NOT_NULL + expressionsMap: + url: + value: PRT.23 + type: STRING + valueCodeableConcept: + valueOf: datatypes/CWE/CodeableConcept + specs: PRT.23 + expressionType: resource + - expressionType: nested + vars: + prt24: STRING_ALL, PRT.24 + condition: $prt24 NOT_NULL + specs: PRT.24 * + generateList: true + expressionsMap: + url: + type: STRING + value: PRT.24 + valueIdentifier: + expressionType: resource + valueOf: datatypes/PLN/Identifier \ No newline at end of file diff --git a/prime-router/metadata/HL7/catchall/hl7/segments/PRT/PractitionerRole.yml b/prime-router/metadata/HL7/catchall/hl7/segments/PRT/PractitionerRole.yml new file mode 100644 index 00000000000..396be5dd387 --- /dev/null +++ b/prime-router/metadata/HL7/catchall/hl7/segments/PRT/PractitionerRole.yml @@ -0,0 +1,78 @@ +# $schema: ./../../../../../json_schema/fhir/hl7-to-fhir-mapping-resource-template.json + +# TODO https://github.com/CDCgov/prime-reportstream/issues/16479 +# - add handling of preferredContactMethod to XTN/ContactPoint +# - need message level conditions to be able to implement FHIR > HL7 mapping +# - mappings should be treated as incomplete and require tests to be written + +# This segment does not appear in NIST or RADx MARS +# PRT.2 - inventory indicates to check for "D" but the correct HL7v2 table value is "DE" + +resourceType: PractitionerRole + +id: + type: STRING + valueOf: "GeneralUtils.generateResourceId()" + expressionType: JEXL + +status: + vars: + prt2: PRT.2 + condition: $prt2 EQUALS "DE" + type: STRING + value: "inactive" + +practitioner: + valueOf: datatypes/XCN/Practitioner + expressionType: reference + specs: PRT.5 + vars: + XADAddress: PRT.14 + +specialty: + valueOf: datatypes/CWE/CodeableConcept + expressionType: resource + condition: $prt6 NOT_NULL + vars: + prt6: PRT.6 + specs: PRT.6 + constants: + hl7v2Field: "PRT.6" + +organization: + condition: $roleOrg NOT_NULL + valueOf: datatypes/XON/Organization + expressionType: reference + specs: $OBXPractitionerRoleOrganization + vars: + XADAddress: $OBXPractitionerRoleOrganizationAddress + roleOrg: STRING_ALL, $OBXPractitionerRoleOrganization + +code: + expressionType: nested + expressionsMap: + coding: + generateList: true + expressionType: nested + expressionsMap: + system: + type: STRING + valueOf: $OBXPractitionerRoleSystem + code: + type: STRING + valueOf: $OBXPractitionerRoleCode + +telecom: + condition: $prt15 NOT_NULL + vars: + prt15: STRING_ALL, PRT.15 + preferredContactMethod: STRING, PRT.23.1 + expressionType: nested + specs: PRT.15 * + generateList: true + expressionsMap: + valueContactPoint: + valueOf: datatypes/XTN/ContactPoint + expressionType: resource + constants: + hl7v2Field: "PRT.15" \ No newline at end of file diff --git a/prime-router/metadata/HL7/catchall/hl7/segments/PRT/RelatedPerson.yml b/prime-router/metadata/HL7/catchall/hl7/segments/PRT/RelatedPerson.yml new file mode 100644 index 00000000000..80ad977fd69 --- /dev/null +++ b/prime-router/metadata/HL7/catchall/hl7/segments/PRT/RelatedPerson.yml @@ -0,0 +1,210 @@ +# $schema: ./../../../../../json_schema/fhir/hl7-to-fhir-mapping-resource-template.json + +# TODO https://github.com/CDCgov/prime-reportstream/issues/16479 +# - add handling of preferredContactMethod to XTN/ContactPoint +# - need message level conditions to be able to implement FHIR > HL7 mapping +# - mappings should be treated as incomplete and require tests to be written + +# This segment does not appear in NIST or RADx MARS + +# PRT.5: Many mappings are a duplicate of XCN[RelatedPerson] (first repetition only) + +resourceType: RelatedPerson + +id: + type: STRING + valueOf: "GeneralUtils.generateResourceId()" + expressionType: JEXL + +relationship: + valueOf: datatypes/CWE/CodeableConcept + expressionType: resource + specs: PRT.4 + +identifier: + expressionType: nested + vars: + xcn11: String, PRT.5.11 + xcn12: String, PRT.5.12 + xcn13: String, PRT.5.13 + xcn14: String, PRT.5.14 + expressionsMap: + value: + type: STRING + valueOf: PRT.5.1 + expressionType: HL7Spec + type: + condition: $xcn13 NOT_NULL + expressionType: resource + specs: PRT.5.13 + valueOf: datatypes/ID/CodeableConcept + extension_1-checkDigit: + condition: $xcn11 NOT_NULL + generateList: true + expressionType: nested + expressionsMap: + url: + type: SYSTEM_URL + value: identifier-check-digit + valueString: + type: STRING + expressionType: HL7Spec + valueOf: PRT.5.11 + extension_2-checkDigitScheme: + condition: $xcn12 NOT_NULL + generateList: true + expressionType: nested + expressionsMap: + url: + type: SYSTEM_URL + value: naming-system-check-digit + valueCode: + valueOf: PRT.5.12 + type: STRING + expressionType: HL7Spec + extension_3-assigningFacility: + condition: $xcn14 NOT_NULL + generateList: true + expressionType: nested + expressionsMap: + url: + type: SYSTEM_URL + value: identifier-location + valueReference: + expressionType: reference + valueOf: datatypes/HD/Location + specs: PRT.5.14 + +name: + expressionType: nested + expressionsMap: + family: + type: STRING + valueOf: PRT.5.2.1 + expressionType: HL7Spec + _family: + expressionType: resource + valueOf: datatypes/FN/ExtensionHumanName-family + specs: PRT.5.2 + given: + generateList: true + expressionType: nested + expressions: + - expressionType: HL7Spec + valueOf: PRT.5.3 + type: STRING + - expressionType: HL7Spec + valueOf: PRT.5.4 + type: STRING + suffix: + generateList: true + expressionType: nested + expressions: + - expressionType: HL7Spec + valueOf: PRT.5.5 + type: STRING + - expressionType: HL7Spec + valueOf: PRT.5.7 + type: STRING + - expressionType: HL7Spec + valueOf: PRT.5.21 + type: STRING + prefix: + type: STRING + valueOf: PRT.5.6 + expressionType: HL7Spec + use: + type: NAME_USE + valueOf: PRT.5.10 + expressionType: HL7Spec + # This needs to use variables because the message parses this field using NULLDT since it is deprecated which means that + # the values do not get correctly loaded and will not be mapped over correctly using a spec. + period_1: + vars: + xcn19: String, PRT.5.19 + xcn20: String, PRT.5.20 + start: String, PRT.5.17.1 + end: String, PRT.5.17.2 + condition: $xcn19 NULL && $xcn20 NULL + expressionType: resource + valueOf: datatypes/DR/Period + # XCN.17 is deprecated so the schema favors using XCN.19/20 if either are populated + period_2: + vars: + xcn19: String, PRT.5.19 + xcn20: String, PRT.5.20 + condition: $xcn19 NOT_NULL || $xcn20 NOT_NULL + expressionType: nested + expressionsMap: + start: + valueOf: "GeneralUtils.dateTimeWithZoneId(periodStart,ZONEID)" + expressionType: JEXL + vars: + periodStart: PRT.5.19 + end: + valueOf: "GeneralUtils.dateTimeWithZoneId(periodEnd,ZONEID)" + expressionType: JEXL + vars: + periodEnd: PRT.5.20 + extension_AssemblyOrder: + expressionType: nested + generateList: true + vars: + xcn18: String, PRT.5.18 + condition: $xcn18 NOT_NULL + expressions: + - expressionType: nested + expressionsMap: + url: + type: SYSTEM_URL + value: humanname-assembly-order + valueCode: + type: STRING + valueOf: PRT.5.18 + expressionType: HL7Spec + +address: + vars: + prt14: STRING_ALL, PRT.14 + condition: $prt14 NOT_NULL + valueOf: datatypes/XAD/Address + expressionType: resource + specs: PRT.14 + generateList: true + +period: + vars: + start: String, PRT.11 + end: String, PRT.12 + expressionType: resource + valueOf: datatypes/DR/Period + +telecom: + condition: $prt15 NOT_NULL + vars: + prt15: STRING_ALL, PRT.15 + preferredContactMethod: STRING, PRT.23.1 + expressionType: nested + specs: PRT.15 * + generateList: true + expressionsMap: + valueContactPoint: + valueOf: datatypes/XTN/ContactPoint + expressionType: resource + constants: + hl7v2Field: "PRT.15" + +extension: + vars: + xcn9: STRING_ALL, PRT.5.9 + generateList: true + expressionType: nested + expressions: + - expressionType: resource + condition: $xcn9 NOT_NULL + valueOf: datatypes/HD/ExtensionAssigningAuthority + specs: PRT.5.9 + - expressionType: resource + valueOf: segments/PRT/PRTExtension + + diff --git a/prime-router/src/main/resources/metadata/hl7_mapping/datatypes/identifier/PLN.yml b/prime-router/src/main/resources/metadata/hl7_mapping/datatypes/identifier/PLN.yml new file mode 100644 index 00000000000..4e682a2426d --- /dev/null +++ b/prime-router/src/main/resources/metadata/hl7_mapping/datatypes/identifier/PLN.yml @@ -0,0 +1,23 @@ +# $schema: ./../../../../../../../metadata/json_schema/fhir/fhir-to-hl7-mapping.json + +elements: + + - name: pln-id-number + value: [ '%resource.value' ] + hl7Spec: [ '%{plnField}-1' ] + + - name: pln-type-of-id-number + resource: '%resource.type' + schema: classpath:/metadata/hl7_mapping/datatypes/codeableConcept/CWE.yml + constants: + cweField: '%{plnField}-2' + + - name: pln-state-other-qualifying-information + value: [ '%resource.extension.where(url = "PLN.3").value'] + hl7Spec: [ '%{plnField}-3' ] + + - name: pln-expiration-date + resource: '%resource.period.end' + constants: + dtmFieldPath: '%{plnField}-4' + schema: classpath:/metadata/hl7_mapping/datatypes/dateTime/DTMorDT.yml \ No newline at end of file diff --git a/prime-router/src/main/resources/metadata/hl7_mapping/resources/Device/PRT.yml b/prime-router/src/main/resources/metadata/hl7_mapping/resources/Device/PRT.yml index f1308a48360..a60ee5b0852 100644 --- a/prime-router/src/main/resources/metadata/hl7_mapping/resources/Device/PRT.yml +++ b/prime-router/src/main/resources/metadata/hl7_mapping/resources/Device/PRT.yml @@ -9,13 +9,56 @@ elements: value: [ '%prtDeviceIndex + 1' ] hl7Spec: [ '%{hl7PRTFieldPath}-1' ] + # TODO reevaluate this mapping https://github.com/CDCgov/prime-reportstream/issues/16479 - name: observation-set-id value: [ '%prtDeviceIndex + 1' ] hl7Spec: [ '%{hl7OBXFieldPath}-1' ] + - name: prt-extension-values + resource: '%resource.extension(%`rsext-prt-extension`)' + schema: classpath:/metadata/hl7_mapping/resources/Device/PRTExtension.yml + - name: placer-order-number resource: '%resource.udiCarrier.where(extension(%`rsext-hl7v2Field`).value = "PRT.10")' constants: eiFieldPath: '%{hl7PRTFieldPath}(%{entityIdIndex})-10' schema: classpath:/metadata/hl7_mapping/datatypes/device-udiCarrier/EI.yml resourceIndex: entityIdIndex + + - name: udi-device-identifier + resource: '%resource.udiCarrier.where(extension(%`rsext-hl7v2Field`).value = "PRT.16")' + constants: + eiFieldPath: '%{hl7PRTFieldPath}-16' + schema: classpath:/metadata/hl7_mapping/datatypes/device-udiCarrier/EI.yml + + - name: device-manufacture-date + resource: '%resource.manufactureDate' + constants: + dtmFieldPath: '%{hl7PRTFieldPath}-17' + schema: classpath:/metadata/hl7_mapping/datatypes/dateTime/DTMorDT.yml + + - name: device-expiry-date + resource: '%resource.expirationDate' + constants: + dtmFieldPath: '%{hl7PRTFieldPath}-18' + schema: classpath:/metadata/hl7_mapping/datatypes/dateTime/DTMorDT.yml + + - name: device-lot-number + value: [ '%resource.lotNumber' ] + hl7Spec: [ '%{hl7PRTFieldPath}-19' ] + + - name: device-serial-number + value: [ '%resource.serialNumber' ] + hl7Spec: [ '%{hl7PRTFieldPath}-20' ] + + - name: device-donation-identification + resource: '%resource.distinctIdentifier' + schema: classpath:/metadata/hl7_mapping/datatypes/identifier/EI.yml + constants: + hl7EIField: '%{hl7PRTFieldPath}-21' + + - name: device-type + resource: '%resource.type' + schema: classpath:/metadata/hl7_mapping/datatypes/codeableConcept/CNE.yml + constants: + cneFieldPath: '%{hl7PRTFieldPath}-22' \ No newline at end of file diff --git a/prime-router/src/main/resources/metadata/hl7_mapping/resources/Device/PRTExtension.yml b/prime-router/src/main/resources/metadata/hl7_mapping/resources/Device/PRTExtension.yml new file mode 100644 index 00000000000..423210f52b8 --- /dev/null +++ b/prime-router/src/main/resources/metadata/hl7_mapping/resources/Device/PRTExtension.yml @@ -0,0 +1,95 @@ +# $schema: ./../../../../../../../metadata/json_schema/fhir/fhir-to-hl7-mapping.json + +elements: + + - name: PRT.2 + value: [ '%resource.extension.where(url = "PRT.2").value' ] + hl7Spec: [ '%{hl7PRTFieldPath}-2' ] + + - name: PRT.3 + resource: '%resource.extension.where(url = "PRT.3").value' + schema: classpath:/metadata/hl7_mapping/datatypes/codeableConcept/CWE.yml + constants: + cweField: '%{hl7PRTFieldPath}-3' + + - name: PRT.4 + resource: '%resource.extension.where(url = "PRT.4").value' + schema: classpath:/metadata/hl7_mapping/datatypes/codeableConcept/CWE.yml + constants: + cweField: '%{hl7PRTFieldPath}-4' + + # XCN[Practitioner] FHIR > HL7 mappings are largely compatible with XCN[RelatedPerson] + # implement union+tail for PRT[PractitionerRole] only + - name: PRT.5 + resource: '%resource.extension.where(url = "PRT.5").value.resolve()' + schema: classpath:/metadata/hl7_mapping/resources/Practitioner/XCN.yml + resourceIndex: relatedPersonIndex + constants: + hl7XCNField: '%{hl7PRTFieldPath}-5(%{relatedPersonIndex})' + + - name: PRT.6 + resource: '%resource.extension.where(url = "PRT.6").value' + schema: classpath:/metadata/hl7_mapping/datatypes/codeableConcept/CWE.yml + resourceIndex: personProviderTypeIndex + constants: + cweField: '%{hl7PRTFieldPath}-6(%{personProviderTypeIndex})' + + - name: PRT.7 + resource: '%resource.extension.where(url = "PRT.7").value' + schema: classpath:/metadata/hl7_mapping/datatypes/codeableConcept/CWE.yml + resourceIndex: organizationUnitTypeIndex + constants: + cweField: '%{hl7PRTFieldPath}-7(%{organizationUnitTypeIndex})' + + - name: PRT.8 + resource: '%resource.extension.where(url = "PRT.8").value.resolve()' + schema: classpath:/metadata/hl7_mapping/resources/Organization/XON.yml + constants: + hl7XONField: '%{hl7PRTFieldPath}-8' + + - name: PRT.9 + resource: '%resource.extension.where(url = "PRT.9").value.resolve()' + schema: classpath:/metadata/hl7_mapping/resources/Location/PL/PL.yml + constants: + hl7PLField: '%{hl7PRTFieldPath}-9' + + - name: PRT.11 + value: [ '%resource.extension.where(url = "PRT.11").value' ] + hl7Spec: [ '%{hl7PRTFieldPath}-11' ] + + - name: PRT.12 + value: [ '%resource.extension.where(url = "PRT.12").value' ] + hl7Spec: [ '%{hl7PRTFieldPath}-12' ] + + - name: PRT.13 + resource: '%resource.extension.where(url = "PRT.13").value' + schema: classpath:/metadata/hl7_mapping/datatypes/codeableConcept/CWE.yml + constants: + cweField: '%{hl7PRTFieldPath}-13' + + - name: PRT.14 + resource: '%resource.extension.where(url = "PRT.14").value' + schema: classpath:/metadata/hl7_mapping/datatypes/Address/XAD.yml + resourceIndex: addressIndex + constants: + xadField: '%{hl7PRTFieldPath}-14(%{addressIndex})' + + - name: PRT.15 + resource: '%resource.extension.where(url = "PRT.15").value' + schema: classpath:/metadata/hl7_mapping/datatypes/contactPoint/XTN.yml + resourceIndex: telecomIndex + constants: + hl7TelecomField: '%{hl7PRTFieldPath}-15' + + - name: PRT.23 + resource: '%resource.extension.where(url = "PRT.23").value' + schema: classpath:/metadata/hl7_mapping/datatypes/codeableConcept/CWE.yml + constants: + cweField: '%{hl7PRTFieldPath}-23' + + - name: PRT.24 + resource: '%resource.extension.where(url = "PRT.24").value' + schema: classpath:/metadata/hl7_mapping/datatypes/identifier/PLN.yml + resourceIndex: contactIdentifierIndex + constants: + plnField: '%{hl7PRTFieldPath}-24(%{contactIdentifierIndex})' \ No newline at end of file diff --git a/prime-router/src/test/resources/fhirengine/smoketest/Expected_FHIR_to_FHIR_FULLELR.fhir b/prime-router/src/test/resources/fhirengine/smoketest/Expected_FHIR_to_FHIR_FULLELR.fhir index 5f2ed3afb61..02b5a5b7389 100644 --- a/prime-router/src/test/resources/fhirengine/smoketest/Expected_FHIR_to_FHIR_FULLELR.fhir +++ b/prime-router/src/test/resources/fhirengine/smoketest/Expected_FHIR_to_FHIR_FULLELR.fhir @@ -1,15159 +1,10764 @@ { - "resourceType" : "Bundle", - "id" : "4242310292166109000.0c59ec76-5370-4777-93e2-8c560660df89", - "meta" : { - "lastUpdated" : "2024-04-16T16:31:32.166-07:00" + "resourceType" : "Bundle", + "id" : "4242310292166109000.0c59ec76-5370-4777-93e2-8c560660df89", + "meta" : { + "lastUpdated" : "2024-04-16T16:31:32.166-07:00" }, - "identifier" : { - "system" : "https://reportstream.cdc.gov/prime-router", - "value" : "MT_COCAA_ORU_AAPHELR.1.6214638" + "identifier" : { + "system" : "https://reportstream.cdc.gov/prime-router", + "value" : "MT_COCAA_ORU_AAPHELR.1.6214638" }, - "type" : "message", - "timestamp" : "2028-08-08T08:28:05.000-07:00", - "entry" : [ - { - "fullUrl" : "MessageHeader/88a50cd6-72bf-34a1-9025-708e7c294242", - "resource" : { - "resourceType" : "MessageHeader", - "id" : "88a50cd6-72bf-34a1-9025-708e7c29cc32", - "meta" : { - "tag" : [ - { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0103", - "code" : "P" - } - ] - }, - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/encoding-characters", - "valueString" : "^~\\&#" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/msh-message-header", - "extension" : [ - { - "url" : "MSH.7", - "valueString" : "20280808092805-0600" - }, - { - "url" : "MSH.21", - "valueIdentifier" : { - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "HL7" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.9.11" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" - } - ] - } - ], - "value" : "PHLabReport-NoAck" - } - }, - { - "url" : "MSH.15", - "valueString" : "NE" - }, - { - "url" : "MSH.16", - "valueString" : "NE" - }, - { - "url" : "MSH.19", - "valueCodeableConcept" : { - "coding" : [ - { - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", - "valueString" : "coding" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding-system", - "valueString" : "ISO" - } - ], - "code" : "ENG", - "display" : "English" - } - ] - } - } - ] - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/character-set", - "valueString" : "UNICODE UTF-8" - } - ], - "eventCoding" : { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0003", - "code" : "R01", - "display" : "ORU^R01^ORU_R01" - }, - "destination" : [ - { - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.114222.4.1.144.2.5" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueString" : "ISO" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "MSH.5" - } - ], - "name" : "DCEED.ELR", - "endpoint" : "urn:oid:2.16.840.1.114222.4.1.144.2.5", - "receiver" : { - "reference" : "Organization/1713310292166578000.130035f1-29f8-4d6a-a67f-571b0169e692" - } - } - ], - "sender" : { - "reference" : "Organization/1713310292166302000.76171447-cee8-4a9e-b5eb-5aa56cd53aa6" - }, - "source" : { - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "MEDITECH" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.114222.4.3.2.2.1.321.111" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueString" : "ISO" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "MSH.3" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/software-binary-id", - "valueString" : "0.2-SNAPSHOT" - } - ], - "name" : "CDC PRIME - Atlanta: 2.16.840.1.114222.4.1.237821", - "software" : "PRIME ReportStream", - "version" : "0.2-SNAPSHOT", - "endpoint" : "urn:oid:2.16.840.1.114222.4.1.237821" + "type" : "message", + "timestamp" : "2028-08-08T08:28:05.000-07:00", + "entry" : [ { + "fullUrl" : "MessageHeader/88a50cd6-72bf-34a1-9025-708e7c294242", + "resource" : { + "resourceType" : "MessageHeader", + "id" : "88a50cd6-72bf-34a1-9025-708e7c29cc32", + "meta" : { + "tag" : [ { + "system" : "http://terminology.hl7.org/CodeSystem/v2-0103", + "code" : "P" + } ] + }, + "extension" : [ { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/encoding-characters", + "valueString" : "^~\\&#" + }, { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/msh-message-header", + "extension" : [ { + "url" : "MSH.7", + "valueString" : "20280808092805-0600" + }, { + "url" : "MSH.21", + "valueIdentifier" : { + "extension" : [ { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension" : [ { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString" : "HL7" + }, { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString" : "2.16.840.1.113883.9.11" + }, { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode" : "ISO" + } ] + } ], + "value" : "PHLabReport-NoAck" + } + }, { + "url" : "MSH.15", + "valueString" : "NE" + }, { + "url" : "MSH.16", + "valueString" : "NE" + }, { + "url" : "MSH.19", + "valueCodeableConcept" : { + "coding" : [ { + "extension" : [ { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", + "valueString" : "coding" + }, { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding-system", + "valueString" : "ISO" + } ], + "code" : "ENG", + "display" : "English" + } ] + } + } ] + }, { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/character-set", + "valueString" : "UNICODE UTF-8" + } ], + "eventCoding" : { + "system" : "http://terminology.hl7.org/CodeSystem/v2-0003", + "code" : "R01", + "display" : "ORU^R01^ORU_R01" + }, + "destination" : [ { + "extension" : [ { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString" : "2.16.840.1.114222.4.1.144.2.5" + }, { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueString" : "ISO" + }, { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString" : "MSH.5" + } ], + "name" : "DCEED.ELR", + "endpoint" : "urn:oid:2.16.840.1.114222.4.1.144.2.5", + "receiver" : { + "reference" : "Organization/1713310292166578000.130035f1-29f8-4d6a-a67f-571b0169e692" } + } ], + "sender" : { + "reference" : "Organization/1713310292166302000.76171447-cee8-4a9e-b5eb-5aa56cd53aa6" + }, + "source" : { + "extension" : [ { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString" : "MEDITECH" + }, { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString" : "2.16.840.1.114222.4.3.2.2.1.321.111" + }, { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueString" : "ISO" + }, { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString" : "MSH.3" + }, { + "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/software-binary-id", + "valueString" : "0.2-SNAPSHOT" + } ], + "name" : "CDC PRIME - Atlanta: 2.16.840.1.114222.4.1.237821", + "software" : "PRIME ReportStream", + "version" : "0.2-SNAPSHOT", + "endpoint" : "urn:oid:2.16.840.1.114222.4.1.237821" } - }, - { - "fullUrl" : "Organization/1713310292166302000.76171447-cee8-4a9e-b5eb-5aa56cd53aa6", - "resource" : { - "resourceType" : "Organization", - "id" : "1713310292166302000.76171447-cee8-4a9e-b5eb-5aa56cd53aa6", - "identifier" : [ - { - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "HD.1" - } - ], - "value" : "COCAA" - } - ] - } - }, - { - "fullUrl" : "Organization/1713310292166578000.130035f1-29f8-4d6a-a67f-571b0169e692", - "resource" : { - "resourceType" : "Organization", - "id" : "1713310292166578000.130035f1-29f8-4d6a-a67f-571b0169e692", - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "MSH.6" - } - ], - "identifier" : [ - { - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "HD.1" - } - ], - "value" : "CDPHE" - }, - { - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "HD.2,HD.3" - } - ], - "type" : { - "coding" : [ - { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0301", - "code" : "ISO" - } - ] - }, - "system" : "urn:ietf:rfc:3986", - "value" : "2.16.840.1.114222.4.1.144" - } - ] - } - }, - { - "fullUrl" : "Provenance/1713310292167449000.0090e502-3b68-49ea-bf27-65cd494728cf", - "resource" : { - "resourceType" : "Provenance", - "id" : "1713310292167449000.0090e502-3b68-49ea-bf27-65cd494728cf", - "target" : [ - { - "reference" : 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"https://reportstream.cdc.gov/fhir/StructureDefinition/business-event", - "valueCode" : "RE" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/business-event", + "valueCode": "RE" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/orc-common-order", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/orc-common-order", + "extension": [ { - "url" : "orc-21-ordering-facility-name", - "valueReference" : { - "reference" : "Organization/1716965606771955000.729f2327-ffc3-433d-b37a-1f3abcd949b0" + "url": "orc-21-ordering-facility-name", + "valueReference": { + "reference": "Organization/1730840482991865000.3d35eaba-8a9d-4845-843f-cf1c07a45dac" } }, { - "url" : "orc-22-ordering-facility-address", - "valueAddress" : { - "state" : "IG", - "postalCode" : "12345", - "country" : "USA" + "url": "orc-22-ordering-facility-address", + "valueAddress": { + "state": "IG", + "postalCode": "12345", + "country": "USA" } }, { - "url" : "orc-12-ordering-provider", - "valueReference" : { - "reference" : "Practitioner/1716965606772633000.73ae00fa-6136-49fa-b65e-a80896e27b9f" + "url": "orc-12-ordering-provider", + "valueReference": { + "reference": "Practitioner/1730840482992620000.77d3afc2-8082-42ae-9214-2d06529d2535" } } ] }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/obr-observation-request", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/obr-observation-request", + "extension": [ { - "url" : "OBR.3", - "valueIdentifier" : { - "extension" : [ + "url": "OBR.3", + "valueIdentifier": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "MMTC.PROD" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "MMTC.PROD" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.3.8589.4.2.106.1" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.3.8589.4.2.106.1" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } @@ -1076,33 +1076,33 @@ } }, { - "url" : "OBR.22", - "valueString" : "20240403120000-0400" + "url": "OBR.22", + "valueString": "20240403120000-0400" }, { - "url" : "OBR.25", - "valueId" : "F" + "url": "OBR.25", + "valueId": "F" }, { - "url" : "OBR.16", - "valueReference" : { - "reference" : "Practitioner/1716965606773328000.a4f5ec14-9d2d-49d6-a085-6bb970f27f23" + "url": "OBR.16", + "valueReference": { + "reference": "Practitioner/1730840482993428000.13891cf0-010b-4865-8388-10ac7550b2d6" } }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/callback-number", - "valueContactPoint" : { - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/callback-number", + "valueContactPoint": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "OBR.17" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "OBR.17" } ], - "_system" : { - "extension" : [ + "_system": { + "extension": [ { - "url" : "http://hl7.org/fhir/StructureDefinition/data-absent-reason", - "valueCode" : "unknown" + "url": "http://hl7.org/fhir/StructureDefinition/data-absent-reason", + "valueCode": "unknown" } ] } @@ -1111,263 +1111,263 @@ ] } ], - "identifier" : [ + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "ORC.3" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "ORC.3" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "MMTC.PROD" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "MMTC.PROD" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.3.8589.4.2.106.1" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.3.8589.4.2.106.1" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0203", - "code" : "FILL" + "system": "http://terminology.hl7.org/CodeSystem/v2-0203", + "code": "FILL" } ] } } ], - "status" : "unknown", - "code" : { - "coding" : [ + "status": "unknown", + "code": { + "coding": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", - "valueString" : "coding" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", + "valueString": "coding" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding-system", - "valueString" : "LN" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding-system", + "valueString": "LN" } ], - "system" : "http://loinc.org", - "version" : "2.71", - "code" : "94558-4", - "display" : "SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay" + "system": "http://loinc.org", + "version": "2.71", + "code": "94558-4", + "display": "SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay" } ] }, - "subject" : { - "reference" : "Patient/1716965606323811000.f9040b25-5524-4df0-ab81-fdb3812f5255" + "subject": { + "reference": "Patient/1730840482975252000.19cdfdb6-358e-4212-a7c8-629958e93fd2" }, - "requester" : { - "extension" : [ + "requester": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/callback-number", - "valueContactPoint" : { - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/callback-number", + "valueContactPoint": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "ORC.14" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "ORC.14" } ], - "_system" : { - "extension" : [ + "_system": { + "extension": [ { - "url" : "http://hl7.org/fhir/StructureDefinition/data-absent-reason", - "valueCode" : "unknown" + "url": "http://hl7.org/fhir/StructureDefinition/data-absent-reason", + "valueCode": "unknown" } ] } } } ], - "reference" : "PractitionerRole/1716965606769185000.b709f005-7525-467f-bb33-5812c79a0d39" + "reference": "PractitionerRole/1730840482987122000.c1a85d78-569d-45ce-802c-d8ca64277f6a" } } }, { - "fullUrl" : "Practitioner/1716965606769699000.059e0fa7-daa8-4d4d-a27f-d80730c4af8f", - "resource" : { - "resourceType" : "Practitioner", - "id" : "1716965606769699000.059e0fa7-daa8-4d4d-a27f-d80730c4af8f", - "extension" : [ + "fullUrl": "Practitioner/1730840482987736000.7aece847-5913-4619-ba8c-08355d5f1ebd", + "resource": { + "resourceType": "Practitioner", + "id": "1730840482987736000.7aece847-5913-4619-ba8c-08355d5f1ebd", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "ORC.12" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "ORC.12" } ] } }, { - "fullUrl" : "Organization/1716965606770458000.9f82cfc6-28cd-4599-8f35-6d5d9d072398", - "resource" : { - "resourceType" : "Organization", - "id" : "1716965606770458000.9f82cfc6-28cd-4599-8f35-6d5d9d072398", - "name" : "SA.OTCSelfReport", - "telecom" : [ + "fullUrl": "Organization/1730840482988591000.b14b3379-27d2-4dc3-b133-fbca0b3b08f2", + "resource": { + "resourceType": "Organization", + "id": "1730840482988591000.b14b3379-27d2-4dc3-b133-fbca0b3b08f2", + "name": "SA.OTCSelfReport", + "telecom": [ { - "_system" : { - "extension" : [ + "_system": { + "extension": [ { - "url" : "http://hl7.org/fhir/StructureDefinition/data-absent-reason", - "valueCode" : "unknown" + "url": "http://hl7.org/fhir/StructureDefinition/data-absent-reason", + "valueCode": "unknown" } ] } } ], - "address" : [ + "address": [ { - "state" : "IG", - "postalCode" : "12345", - "country" : "USA" + "state": "IG", + "postalCode": "12345", + "country": "USA" } ] } }, { - "fullUrl" : "PractitionerRole/1716965606769185000.b709f005-7525-467f-bb33-5812c79a0d39", - "resource" : { - "resourceType" : "PractitionerRole", - "id" : "1716965606769185000.b709f005-7525-467f-bb33-5812c79a0d39", - "practitioner" : { - "reference" : "Practitioner/1716965606769699000.059e0fa7-daa8-4d4d-a27f-d80730c4af8f" + "fullUrl": "PractitionerRole/1730840482987122000.c1a85d78-569d-45ce-802c-d8ca64277f6a", + "resource": { + "resourceType": "PractitionerRole", + "id": "1730840482987122000.c1a85d78-569d-45ce-802c-d8ca64277f6a", + "practitioner": { + "reference": "Practitioner/1730840482987736000.7aece847-5913-4619-ba8c-08355d5f1ebd" }, - "organization" : { - "reference" : "Organization/1716965606770458000.9f82cfc6-28cd-4599-8f35-6d5d9d072398" + "organization": { + "reference": "Organization/1730840482988591000.b14b3379-27d2-4dc3-b133-fbca0b3b08f2" } } }, { - "fullUrl" : "Organization/1716965606771955000.729f2327-ffc3-433d-b37a-1f3abcd949b0", - "resource" : { - "resourceType" : "Organization", - "id" : "1716965606771955000.729f2327-ffc3-433d-b37a-1f3abcd949b0", - "name" : "SA.OTCSelfReport" + "fullUrl": "Organization/1730840482991865000.3d35eaba-8a9d-4845-843f-cf1c07a45dac", + "resource": { + "resourceType": "Organization", + "id": "1730840482991865000.3d35eaba-8a9d-4845-843f-cf1c07a45dac", + "name": "SA.OTCSelfReport" } }, { - "fullUrl" : "Practitioner/1716965606772633000.73ae00fa-6136-49fa-b65e-a80896e27b9f", - "resource" : { - "resourceType" : "Practitioner", - "id" : "1716965606772633000.73ae00fa-6136-49fa-b65e-a80896e27b9f" + "fullUrl": "Practitioner/1730840482992620000.77d3afc2-8082-42ae-9214-2d06529d2535", + "resource": { + "resourceType": "Practitioner", + "id": "1730840482992620000.77d3afc2-8082-42ae-9214-2d06529d2535" } }, { - "fullUrl" : "Practitioner/1716965606773328000.a4f5ec14-9d2d-49d6-a085-6bb970f27f23", - "resource" : { - "resourceType" : "Practitioner", - "id" : "1716965606773328000.a4f5ec14-9d2d-49d6-a085-6bb970f27f23" + "fullUrl": "Practitioner/1730840482993428000.13891cf0-010b-4865-8388-10ac7550b2d6", + "resource": { + "resourceType": "Practitioner", + "id": "1730840482993428000.13891cf0-010b-4865-8388-10ac7550b2d6" } }, { - "fullUrl" : "DiagnosticReport/1716965606775092000.695c70ec-bd41-47ba-a554-25585d8aabd7", - "resource" : { - "resourceType" : "DiagnosticReport", - "id" : "1716965606775092000.695c70ec-bd41-47ba-a554-25585d8aabd7", - "identifier" : [ + "fullUrl": "DiagnosticReport/1730840482995346000.7eb1816c-017a-4a77-ad2a-06f5b83d23d3", + "resource": { + "resourceType": "DiagnosticReport", + "id": "1730840482995346000.7eb1816c-017a-4a77-ad2a-06f5b83d23d3", + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "MMTC.PROD" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "MMTC.PROD" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.3.8589.4.2.106.1" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.3.8589.4.2.106.1" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0203", - "code" : "FILL" + "system": "http://terminology.hl7.org/CodeSystem/v2-0203", + "code": "FILL" } ] } } ], - "basedOn" : [ + "basedOn": [ { - "reference" : "ServiceRequest/1716965606773953000.70c9858c-cfdb-4635-9699-24ba6db8b303" + "reference": "ServiceRequest/1730840482994132000.b61afbc8-b646-4d5f-b92f-c629e93b3455" } ], - "status" : "final", - "code" : { - "coding" : [ + "status": "final", + "code": { + "coding": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", - "valueString" : "coding" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", + "valueString": "coding" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding-system", - "valueString" : "LN" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding-system", + "valueString": "LN" } ], - "system" : "http://loinc.org", - "version" : "2.71", - "code" : "94558-4", - "display" : "SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay" + "system": "http://loinc.org", + "version": "2.71", + "code": "94558-4", + "display": "SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay" } ] }, - "subject" : { - "reference" : "Patient/1716965606323811000.f9040b25-5524-4df0-ab81-fdb3812f5255" + "subject": { + "reference": "Patient/1730840482975252000.19cdfdb6-358e-4212-a7c8-629958e93fd2" }, - "effectiveDateTime" : "2024-04-03T12:00:00-04:00", - "_effectiveDateTime" : { - "extension" : [ + "effectiveDateTime": "2024-04-03T12:00:00-04:00", + "_effectiveDateTime": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", - "valueString" : "20240403120000-0400" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", + "valueString": "20240403120000-0400" } ] }, - "issued" : "2024-04-03T12:00:00-04:00", - "_issued" : { - "extension" : [ + "issued": "2024-04-03T12:00:00-04:00", + "_issued": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", - "valueString" : "20240403120000-0400" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", + "valueString": "20240403120000-0400" } ] }, - "specimen" : [ + "specimen": [ { - "reference" : "Specimen/1716965606768446000.4cf7e06a-44ef-4645-9e77-f685b48df80d" + "reference": "Specimen/1730840482986715000.3a41d073-d8ad-4808-83b6-676c0558ec36" }, { - "reference" : "Specimen/1716965606329873000.d8ec48f1-fc30-425a-b216-ee8bf8d55db2" + "reference": "Specimen/1730840482985425000.76564375-3fc9-41ef-8605-864178bc49e0" } ], - "result" : [ + "result": [ { - "reference" : "Observation/1716965606325282000.e4e667b9-d8f8-4596-8818-eec074916908" + "reference": "Observation/1730840482977261000.587613a2-84cf-4698-9a9c-429a0958796c" }, { - "reference" : "Observation/1716965606327578000.91bd7b9e-c55b-446c-bdd3-5c69c267ec51" + "reference": "Observation/1730840482981943000.d4449e8e-538d-4b4e-9d01-87b74dcb819e" } ] } diff --git a/prime-router/src/testIntegration/kotlin/datatests/mappinginventory/catchall/obx/OBXToObservationTests.kt b/prime-router/src/testIntegration/kotlin/datatests/mappinginventory/catchall/obx/OBXToObservationTests.kt index 7bbe5951813..173b4746c02 100644 --- a/prime-router/src/testIntegration/kotlin/datatests/mappinginventory/catchall/obx/OBXToObservationTests.kt +++ b/prime-router/src/testIntegration/kotlin/datatests/mappinginventory/catchall/obx/OBXToObservationTests.kt @@ -2,6 +2,7 @@ package gov.cdc.prime.router.datatests.mappinginventory.obx import gov.cdc.prime.router.datatests.mappinginventory.verifyHL7ToFHIRToHL7Mapping import org.junit.jupiter.api.Test +import kotlin.test.Ignore class OBXToObservationTests { @@ -128,4 +129,21 @@ class OBXToObservationTests { ).passed ) } + + @Test + fun `test correctly handles OBX-33`() { + assert(verifyHL7ToFHIRToHL7Mapping("catchall/obx/OBX-to-Observation-obx-33").passed) + } + + // TODO https://github.com/CDCgov/prime-reportstream/issues/16522 + @Test + @Ignore + fun `test correctly handles OBX-33 without extension`() { + assert( + verifyHL7ToFHIRToHL7Mapping( + "catchall/obx/OBX-to-Observation-obx-33-no-extension", + skipHl7ToFhir = true + ).passed + ) + } } \ No newline at end of file diff --git a/prime-router/src/testIntegration/kotlin/datatests/mappinginventory/catchall/prt/PRTToDeviceTests.kt b/prime-router/src/testIntegration/kotlin/datatests/mappinginventory/catchall/prt/PRTToDeviceTests.kt new file mode 100644 index 00000000000..8eef0d0c91f --- /dev/null +++ b/prime-router/src/testIntegration/kotlin/datatests/mappinginventory/catchall/prt/PRTToDeviceTests.kt @@ -0,0 +1,11 @@ +package gov.cdc.prime.router.datatests.mappinginventory.catchall.prt + +import gov.cdc.prime.router.datatests.mappinginventory.verifyHL7ToFHIRToHL7Mapping +import org.junit.jupiter.api.Test + +class PRTToDeviceTests { + @Test + fun `test translate from PRT to Device to PRT`() { + assert(verifyHL7ToFHIRToHL7Mapping("catchall/prt/prt-to-device").passed) + } +} \ No newline at end of file diff --git a/prime-router/src/testIntegration/kotlin/datatests/mappinginventory/catchall/xpn/XPNtoHumanNameTests.kt b/prime-router/src/testIntegration/kotlin/datatests/mappinginventory/catchall/xpn/XPNtoHumanNameTests.kt index 400b1bd09a7..d90d3028dd2 100644 --- a/prime-router/src/testIntegration/kotlin/datatests/mappinginventory/catchall/xpn/XPNtoHumanNameTests.kt +++ b/prime-router/src/testIntegration/kotlin/datatests/mappinginventory/catchall/xpn/XPNtoHumanNameTests.kt @@ -5,8 +5,12 @@ import org.junit.jupiter.api.Test class XPNtoHumanNameTests { @Test - fun `test translate to HL7 to FHIR to HL7`() { + fun `test translate to HL7 to FHIR to HL7 when XPN-10 empty and XPN-12,13 populated`() { assert(verifyHL7ToFHIRToHL7Mapping("catchall/xpn/xpn-to-humanname-xpn12-13-populated-xpn10-empty").passed) + } + + @Test + fun `test translate to HL7 to FHIR to HL7 when XPN-10 populated and XPN-12,13 empty`() { assert(verifyHL7ToFHIRToHL7Mapping("catchall/xpn/xpn-to-humanname-xpn10-populated-xpn12-13-empty").passed) } } \ No newline at end of file diff --git a/prime-router/src/testIntegration/resources/datatests/HL7_to_FHIR/sample_oml_20240319-001.fhir b/prime-router/src/testIntegration/resources/datatests/HL7_to_FHIR/sample_oml_20240319-001.fhir index 89311771508..67884d8464b 100644 --- a/prime-router/src/testIntegration/resources/datatests/HL7_to_FHIR/sample_oml_20240319-001.fhir +++ b/prime-router/src/testIntegration/resources/datatests/HL7_to_FHIR/sample_oml_20240319-001.fhir @@ -1,675 +1,669 @@ { - "resourceType" : "Bundle", - "id" : "1711057489333547000.de4ee6f2-3ae9-4041-9eae-66a49d883798", - "meta" : { - "lastUpdated" : "2024-03-21T17:44:49.340-04:00" + "resourceType": "Bundle", + "id": "1730739114749225000.7a1d88aa-6583-4af7-9ea6-d57fe9b47681", + "meta": { + "lastUpdated": "2024-11-04T11:51:54.749-05:00" }, - "identifier" : { - "system" : "https://reportstream.cdc.gov/prime-router", - "value" : "31808297" + "identifier": { + "system": "https://reportstream.cdc.gov/prime-router", + "value": "31808297" }, - "type" : "message", - "timestamp" : "2023-05-06T06:29:16.000-04:00", - "entry" : [ + "type": "message", + "timestamp": "2023-05-06T06:29:16.000-04:00", + "entry": [ { - "fullUrl" : "MessageHeader/87c2d0db-6f31-3666-b9e2-7152e039c11f", - "resource" : { - "resourceType" : "MessageHeader", - "id" : "87c2d0db-6f31-3666-b9e2-7152e039c11f", - "meta" : { - "tag" : [ + "fullUrl": "MessageHeader/1730739114751857000.7b58d391-0a13-43e5-bf93-2b019746e3d6", + "resource": { + "resourceType": "MessageHeader", + "id": "1730739114751857000.7b58d391-0a13-43e5-bf93-2b019746e3d6", + "meta": { + "tag": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0103", - "code" : "P" + "system": "http://terminology.hl7.org/CodeSystem/v2-0103", + "code": "P" } ] }, - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/msh-message-header", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/msh-message-header", + "extension": [ { - "url" : "MSH.7", - "valueString" : "20230506052916-0500" + "url": "MSH.7", + "valueString": "20230506052916-0500" }, { - "url" : "MSH.15", - "valueString" : "AL" + "url": "MSH.15", + "valueString": "AL" }, { - "url" : "MSH.16", - "valueString" : "AL" + "url": "MSH.16", + "valueString": "AL" }, { - "url" : "MSH.21", - "valueIdentifier" : { - "extension" : [ + "url": "MSH.21", + "valueIdentifier": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.9.82" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.82" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "value" : "LAB_PRU_COMPONENT" + "value": "LAB_PRU_COMPONENT" } }, { - "url" : "MSH.21", - "valueIdentifier" : { - "extension" : [ + "url": "MSH.21", + "valueIdentifier": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.9.22" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.22" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "value" : "LAB_TO_COMPONENT" + "value": "LAB_TO_COMPONENT" } }, { - "url" : "MSH.21", - "valueIdentifier" : { - "extension" : [ + "url": "MSH.21", + "valueIdentifier": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.9.22" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.22" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "value" : "LAB_THREE_COMPONENT" + "value": "LAB_THREE_COMPONENT" } } ] } ], - "eventCoding" : { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0003", - "code" : "O21", - "display" : "OML^O21^OML_O21" + "eventCoding": { + "system": "http://terminology.hl7.org/CodeSystem/v2-0003", + "code": "O21", + "display": "OML^O21^OML_O21" }, - "destination" : [ + "destination": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "natus.health.state.mn.us" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "natus.health.state.mn.us" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueString" : "DNS" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueString": "DNS" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "MSH.5" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "MSH.5" } ], - "name" : "NATUS", - "receiver" : { - "reference" : "Organization/1711057489418382000.2634a831-fc30-4e3c-9ad1-38956816c7cb" + "name": "NATUS", + "receiver": { + "reference": "Organization/1730739114751409000.0359f09c-68a7-456f-b8aa-abf17e915c4d" } } ], - "sender" : { - "reference" : "Organization/1711057489388301000.230b2a54-9a57-42fe-8b05-76279ff73a84" + "sender": { + "reference": "Organization/1730739114750075000.3593d09a-2416-4d98-8b94-e73572042565" }, - "source" : { - "extension" : [ + "source": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "Epic" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "Epic" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "1.2.840.114350.1.13.145.2.7.2.695071" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "1.2.840.114350.1.13.145.2.7.2.695071" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueString" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueString": "ISO" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "MSH.3" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "MSH.3" } ], - "endpoint" : "urn:oid:1.2.840.114350.1.13.145.2.7.2.695071" + "endpoint": "urn:oid:1.2.840.114350.1.13.145.2.7.2.695071" } } }, { - "fullUrl" : 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"type" : { - "coding" : [ + "type": { + "coding": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0301", - "code" : "DNS" + "system": "http://terminology.hl7.org/CodeSystem/v2-0301", + "code": "DNS" } ] }, - "value" : "centracare.com" + "value": "centracare.com" } ] } }, { - "fullUrl" : "Organization/1711057489418382000.2634a831-fc30-4e3c-9ad1-38956816c7cb", - "resource" : { - "resourceType" : "Organization", - "id" : "1711057489418382000.2634a831-fc30-4e3c-9ad1-38956816c7cb", - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "MSH.6" + "fullUrl": "Organization/1730739114751409000.0359f09c-68a7-456f-b8aa-abf17e915c4d", + "resource": { + "resourceType": "Organization", + "id": "1730739114751409000.0359f09c-68a7-456f-b8aa-abf17e915c4d", + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "MSH.6" } ], - "identifier" : [ + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "HD.1" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "HD.1" } ], - "value" : "MN Public Health Lab" + "value": "MN Public Health Lab" }, { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "HD.2,HD.3" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "HD.2,HD.3" } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0301", - "code" : "ISO" + "system": "http://terminology.hl7.org/CodeSystem/v2-0301", + "code": "ISO" } ] }, - "system" : "urn:ietf:rfc:3986", - "value" : "2.16.840.1.114222.4.1.10080" + "system": "urn:ietf:rfc:3986", + "value": "2.16.840.1.114222.4.1.10080" } ] } }, { - "fullUrl" : 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"http://hl7.org/fhir/StructureDefinition/patient-mothersMaidenName", + "valueHumanName": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", + "extension": [ { - "url" : "XPN.2", - "valueString" : "BB SARAH" + "url": "XPN.2", + "valueString": "BB SARAH" } ] } ], - "family" : "SMITH", - "given" : [ + "family": "SMITH", + "given": [ "BB SARAH" ] } } ], - "identifier" : [ + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cx-identifier", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cx-identifier", + "extension": [ { - "url" : "CX.5", - "valueString" : "MR" + "url": "CX.5", + "valueString": "MR" } ] }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "PID.3" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "PID.3" } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "code" : "MR" + "code": "MR" } ] }, - "value" : "11102779", - "assigner" : { - "reference" : "Organization/1711057490004869000.f9fc321d-8e76-4dbd-8119-38e7070309ed" + "value": "11102779", + "assigner": { + "reference": "Organization/1730739114755796000.79ba39f2-7250-4e19-8514-b7f67031d921" } } ], - "name" : [ + "name": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", + "extension": [ { - "url" : "XPN.2", - "valueString" : "BB SARAH" + "url": "XPN.2", + "valueString": "BB SARAH" }, { - "url" : "XPN.7", - "valueString" : "L" + "url": "XPN.7", + "valueString": "L" } ] } ], - "use" : "official", - "family" : "SMITH", - "given" : [ + "use": "official", + "family": "SMITH", + "given": [ "BB SARAH" ] } ], - "telecom" : [ + "telecom": [ { - "extension" : [ + "extension": [ { - "url" : "http://hl7.org/fhir/StructureDefinition/contactpoint-area", - "valueString" : "763" + "url": "http://hl7.org/fhir/StructureDefinition/contactpoint-area", + "valueString": "763" }, { - "url" : "http://hl7.org/fhir/StructureDefinition/contactpoint-local", - "valueString" : "555555" + "url": "http://hl7.org/fhir/StructureDefinition/contactpoint-local", + "valueString": "555555" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xtn-contact-point", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xtn-contact-point", + "extension": [ { - "url" : "XTN.3", - "valueString" : "PH" + "url": "XTN.3", + "valueString": "PH" }, { - "url" : "XTN.7", - "valueString" : "555555" + "url": "XTN.7", + "valueString": "555555" }, { - "url" : "XTN.9", - "valueString" : "(763)555-5555" + "url": "XTN.9", + "valueString": "(763)555-5555" } ] } ], - "system" : "phone", - "use" : "home" + "system": "phone", + "use": "home" } ], - "gender" : "male", - "birthDate" : "2023-05-04", - "_birthDate" : { - "extension" : [ + "gender": "male", + "birthDate": "2023-05-04", + "_birthDate": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", - "valueString" : "20230504131023-0500" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", + "valueString": "20230504131023-0500" }, { - "url" : "http://hl7.org/fhir/StructureDefinition/patient-birthTime", - "valueDateTime" : "2023-05-04T13:10:23-05:00" + "url": "http://hl7.org/fhir/StructureDefinition/patient-birthTime", + "valueDateTime": "2023-05-04T13:10:23-05:00" } ] }, - "deceasedBoolean" : false, - "address" : [ + "deceasedBoolean": false, + "address": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xad-address", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xad-address", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/sad-address-line", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/sad-address-line", + "extension": [ { - "url" : "SAD.1", - "valueString" : "555 STATE HIGHWAY 13" + "url": "SAD.1", + "valueString": "555 STATE HIGHWAY 13" } ] }, { - "url" : "XAD.7", - "valueCode" : "H" + "url": "XAD.7", + "valueCode": "H" } ] } ], - "use" : "home", - "line" : [ + "use": "home", + "line": [ "555 STATE HIGHWAY 13" ], - "city" : "DEER CREEK", - "district" : "OTTER TAIL", - "state" : "MN", - "postalCode" : "56527-9657", - "country" : "USA" + "city": "DEER CREEK", + "district": "OTTER TAIL", + "state": "MN", + "postalCode": "56527-9657", + "country": "USA" } ], - "multipleBirthInteger" : 2, - "link" : [ + "multipleBirthInteger": 2, + "link": [ { - "other" : { - "reference" : "RelatedPerson/1711057490022564000.99d677b9-359b-41c9-9669-5245fe62ff3d" + "other": { + "reference": "RelatedPerson/1730739114760257000.8359778f-13da-4073-b947-83d222795489" }, - "type" : "seealso" + "type": "seealso" } ] } }, { - "fullUrl" : "Organization/1711057490004869000.f9fc321d-8e76-4dbd-8119-38e7070309ed", - "resource" : { - "resourceType" : "Organization", - "id" : "1711057490004869000.f9fc321d-8e76-4dbd-8119-38e7070309ed", - "identifier" : [ + "fullUrl": "Organization/1730739114755796000.79ba39f2-7250-4e19-8514-b7f67031d921", + "resource": { + "resourceType": "Organization", + "id": "1730739114755796000.79ba39f2-7250-4e19-8514-b7f67031d921", + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "HD.1" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "HD.1" } ], - "value" : "CRPMRN" + "value": "CRPMRN" } ] } }, { - "fullUrl" : "RelatedPerson/1711057490022564000.99d677b9-359b-41c9-9669-5245fe62ff3d", - "resource" : { - "resourceType" : "RelatedPerson", - "id" : "1711057490022564000.99d677b9-359b-41c9-9669-5245fe62ff3d", - "identifier" : [ + "fullUrl": "RelatedPerson/1730739114760257000.8359778f-13da-4073-b947-83d222795489", + "resource": { + "resourceType": "RelatedPerson", + "id": "1730739114760257000.8359778f-13da-4073-b947-83d222795489", + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "http://hl7.org/fhir/StructureDefinition/identifier-checkDigit", - "valueString" : "SADIE" + "url": "http://hl7.org/fhir/StructureDefinition/identifier-checkDigit", + "valueString": "SADIE" }, { - "url" : "http://hl7.org/fhir/StructureDefinition/namingsystem-checkDigit", - "valueString" : "S" + "url": "http://hl7.org/fhir/StructureDefinition/namingsystem-checkDigit", + "valueString": "S" } ], - "value" : "SMITH" + "value": "SMITH" } ] } }, { - "fullUrl" : 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: "XCN.10", - "valueString" : "L" + "url": "XCN.10", + "valueString": "L" } ] }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "ORC.12" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "ORC.12" } ], - "identifier" : [ + "identifier": [ { - "type" : { - "coding" : [ + "type": { + "coding": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/codeable-concept-id", - "valueBoolean" : true + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/codeable-concept-id", + "valueBoolean": true } ], - "code" : "NPI" + "code": "NPI" } ] }, - "value" : "1265136360", - "assigner" : { - "reference" : "Organization/1711057490050705000.817ab24f-30a2-47b0-8b06-289cbe842702" + "value": "1265136360", + "assigner": { + "reference": "Organization/1730739114763901000.bfb9d0d8-ed2e-4ed7-ad63-da58d8bc35a3" } } ], - "name" : [ + "name": [ { - "use" : "official", - "family" : "JONES", - "given" : [ + "use": "official", + "family": "JONES", + "given": [ "JANE" ] } @@ -677,22 +671,22 @@ } }, { - "fullUrl" : "Organization/1711057490055996000.c11fedb1-26f0-4585-80fc-0342b257ec44", - "resource" : { - "resourceType" : "Organization", - "id" : "1711057490055996000.c11fedb1-26f0-4585-80fc-0342b257ec44", - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/organization-name-type", - "valueCoding" : { - "extension" : [ + "fullUrl": "Organization/1730739114766157000.64d5716b-8171-4056-9e75-5e7ffbbac790", + "resource": { + "resourceType": "Organization", + "id": "1730739114766157000.64d5716b-8171-4056-9e75-5e7ffbbac790", + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/organization-name-type", + "valueCoding": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", - "valueCodeableConcept" : { - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", + "valueCodeableConcept": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "XON.2" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "XON.2" } ] } @@ -701,78 +695,72 @@ } }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xon-organization", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xon-organization", + "extension": [ { - "url" : "XON.10", - "valueString" : "1043269798" + "url": "XON.10", + "valueString": "1043269798" } ] } ], - "identifier" : [ + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "CMS" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-unknown-type" - }, + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "CMS" } ] } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0203", - "code" : "NPI" + "system": "http://terminology.hl7.org/CodeSystem/v2-0203", + "code": "NPI" } ] }, - "value" : "1043269798" + "value": "1043269798" } ], - "name" : "ST. CLOUD HOSPITAL" + "name": "ST. CLOUD HOSPITAL" } }, { - "fullUrl" : "PractitionerRole/1711057490050288000.49fc10fd-e410-4862-bac9-9dbda84a2798", - "resource" : { - "resourceType" : "PractitionerRole", - "id" : "1711057490050288000.49fc10fd-e410-4862-bac9-9dbda84a2798", - "practitioner" : { - "reference" : "Practitioner/1711057490052021000.d196ef95-5b27-468c-ab41-3444bf76029a" + "fullUrl": "PractitionerRole/1730739114763601000.385766cc-2877-423a-b1c9-dfb84b4d8e80", + "resource": { + "resourceType": "PractitionerRole", + "id": "1730739114763601000.385766cc-2877-423a-b1c9-dfb84b4d8e80", + "practitioner": { + "reference": "Practitioner/1730739114764825000.f4721f7d-ac56-48a8-a3f0-9d144b1f5c80" }, - "organization" : { - "reference" : "Organization/1711057490055996000.c11fedb1-26f0-4585-80fc-0342b257ec44" + "organization": { + "reference": "Organization/1730739114766157000.64d5716b-8171-4056-9e75-5e7ffbbac790" } } }, { - "fullUrl" : "Organization/1711057490059315000.6242a24f-c085-4313-83ec-c057fc602200", - "resource" : { - "resourceType" : "Organization", - "id" : "1711057490059315000.6242a24f-c085-4313-83ec-c057fc602200", - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/organization-name-type", - "valueCoding" : { - "extension" : [ + "fullUrl": "Organization/1730739114769985000.c443f2f7-afca-4e7f-87ec-cc9cfaad7378", + "resource": { + "resourceType": "Organization", + "id": "1730739114769985000.c443f2f7-afca-4e7f-87ec-cc9cfaad7378", + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/organization-name-type", + "valueCoding": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", - "valueCodeableConcept" : { - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", + "valueCodeableConcept": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "XON.2" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "XON.2" } ] } @@ -781,65 +769,59 @@ } }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xon-organization", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xon-organization", + "extension": [ { - "url" : "XON.10", - "valueString" : "1043269798" + "url": "XON.10", + "valueString": "1043269798" } ] } ], - "identifier" : [ + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "CMS" - }, + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-unknown-type" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "CMS" } ] } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0203", - "code" : "NPI" + "system": "http://terminology.hl7.org/CodeSystem/v2-0203", + "code": "NPI" } ] }, - "value" : "1043269798" + "value": "1043269798" } ], - "name" : "ST. CLOUD HOSPITAL" + "name": "ST. 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"url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding-system", - "valueString" : "SCT" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding-system", + "valueString": "SCT" } ], - "system" : "http://snomed.info/sct", - "code" : "440500007", - "display" : "Blood spot specimen" + "system": "http://snomed.info/sct", + "code": "440500007", + "display": "Blood spot specimen" } ] }, - "collection" : { - "collectedDateTime" : "2023-05-06T06:00:00-05:00", - "_collectedDateTime" : { - "extension" : [ + "collection": { + "collectedDateTime": "2023-05-06T06:00:00-05:00", + "_collectedDateTime": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", - "valueString" : "20230506060000-0500" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", + "valueString": "20230506060000-0500" } ] } diff --git a/prime-router/src/testIntegration/resources/datatests/HL7_to_FHIR/sample_orm_20230809-001-with-enrichment.fhir b/prime-router/src/testIntegration/resources/datatests/HL7_to_FHIR/sample_orm_20230809-001-with-enrichment.fhir index 79b994c95a1..c8349b24c2b 100644 --- a/prime-router/src/testIntegration/resources/datatests/HL7_to_FHIR/sample_orm_20230809-001-with-enrichment.fhir +++ b/prime-router/src/testIntegration/resources/datatests/HL7_to_FHIR/sample_orm_20230809-001-with-enrichment.fhir @@ -1,677 +1,671 @@ { - "resourceType" : "Bundle", - "id" : "1707847039699548000.20a09324-cf16-43bc-9328-52840bc77a0a", - "meta" : { - "lastUpdated" : "2024-02-13T11:57:19.729-06:00" + "resourceType": "Bundle", + "id": "1730739044768853000.b4938369-ac66-4abc-93a6-c1a8db4da033", + "meta": { + "lastUpdated": "2024-11-04T11:50:44.779-05:00" }, - "identifier" : { - "system" : "https://reportstream.cdc.gov/prime-router", - "value" : "31808297" + "identifier": { + "system": "https://reportstream.cdc.gov/prime-router", + "value": "31808297" }, - "type" : "message", - "timestamp" : "2023-05-06T05:29:16.000-05:00", - "entry" : [ + "type": "message", + "timestamp": "2023-05-06T06:29:16.000-04:00", + "entry": [ { - "fullUrl" : "MessageHeader/87c2d0db-6f31-3666-b9e2-7152e039c11f", - "resource" : { - "resourceType" : "MessageHeader", - "id" : "87c2d0db-6f31-3666-b9e2-7152e039c11f", - "meta" : { - "tag" : [ + "fullUrl": "MessageHeader/1730739044854563000.a02af09b-b5fc-460a-879d-d38e881ba202", + "resource": { + "resourceType": "MessageHeader", + "id": "1730739044854563000.a02af09b-b5fc-460a-879d-d38e881ba202", + "meta": { + "tag": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0103", - "code" : "P" + "system": "http://terminology.hl7.org/CodeSystem/v2-0103", + "code": "P" } ] }, - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/msh-message-header", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/msh-message-header", + "extension": [ { - "url" : "MSH.7", - "valueString" : "20230506052916-0500" + "url": "MSH.7", + "valueString": "20230506052916-0500" }, { - "url" : "MSH.15", - "valueString" : "AL" + "url": "MSH.15", + "valueString": "AL" }, { - "url" : "MSH.16", - "valueString" : "AL" + "url": "MSH.16", + "valueString": "AL" }, { - "url" : "MSH.21", - "valueIdentifier" : { - "extension" : [ + "url": "MSH.21", + "valueIdentifier": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.9.82" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.82" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "value" : "LAB_PRU_COMPONENT" + "value": "LAB_PRU_COMPONENT" } }, { - "url" : "MSH.21", - "valueIdentifier" : { - "extension" : [ + "url": "MSH.21", + "valueIdentifier": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.9.22" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.22" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "value" : "LAB_TO_COMPONENT" + "value": "LAB_TO_COMPONENT" } }, { - "url" : "MSH.21", - "valueIdentifier" : { - "extension" : [ + "url": "MSH.21", + "valueIdentifier": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.9.22" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.22" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "value" : "LAB_THREE_COMPONENT" + "value": "LAB_THREE_COMPONENT" } } ] } ], - "eventCoding" : { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0003", - "code" : "O01", - "display" : "ORM^O01^ORM_O01" + "eventCoding": { + "system": "http://terminology.hl7.org/CodeSystem/v2-0003", + "code": "O01", + "display": "ORM^O01^ORM_O01" }, - "destination" : [ + "destination": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "natus.health.state.mn.us" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "natus.health.state.mn.us" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueString" : "DNS" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueString": "DNS" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "MSH.5" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "MSH.5" } ], - "name" : "NATUS", - "receiver" : { - "reference" : "Organization/1707847039803464000.ea58b9a4-d88c-4058-88ad-f7c5ded76902" + "name": "NATUS", + "receiver": { + "reference": "Organization/1730739044853311000.a7c7630d-0fe8-4c46-aaf7-e3d8731f18b6" } } ], - "sender" : { - "reference" : "Organization/1707847039773359000.26190dfc-35d6-4bdc-bac2-54a57ab2aaac" + "sender": { + "reference": "Organization/1730739044832105000.94f279f5-2ad0-4b90-b5ad-80f818bd000e" }, - "source" : { - "extension" : [ + "source": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "Epic" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "Epic" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "1.2.840.114350.1.13.145.2.7.2.695071" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "1.2.840.114350.1.13.145.2.7.2.695071" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueString" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueString": "ISO" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "MSH.3" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "MSH.3" } ], - "software" : "Purple PRIME ReportStream", - "version" : "0.2-YELLOW", - "endpoint" : "urn:oid:1.2.840.114350.1.13.145.2.7.2.695071" + "software": "Purple PRIME ReportStream", + "version": "0.2-YELLOW", + "endpoint": "urn:oid:1.2.840.114350.1.13.145.2.7.2.695071" } } }, { - "fullUrl" : "Organization/1707847039773359000.26190dfc-35d6-4bdc-bac2-54a57ab2aaac", - "resource" : { - "resourceType" : "Organization", - "id" : "1707847039773359000.26190dfc-35d6-4bdc-bac2-54a57ab2aaac", - "identifier" : [ + "fullUrl": "Organization/1730739044832105000.94f279f5-2ad0-4b90-b5ad-80f818bd000e", + "resource": { + "resourceType": "Organization", + "id": "1730739044832105000.94f279f5-2ad0-4b90-b5ad-80f818bd000e", + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "HD.1" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "HD.1" } ], - "value" : "Centracare" + "value": "Centracare" }, { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "HD.2,HD.3" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "HD.2,HD.3" } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0301", - "code" : "DNS" + "system": "http://terminology.hl7.org/CodeSystem/v2-0301", + "code": "DNS" } ] }, - "value" : "centracare.com" + "value": "centracare.com" } ] } }, { - "fullUrl" : "Organization/1707847039803464000.ea58b9a4-d88c-4058-88ad-f7c5ded76902", - "resource" : { - "resourceType" : "Organization", - "id" : "1707847039803464000.ea58b9a4-d88c-4058-88ad-f7c5ded76902", - 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"type" : { - "coding" : [ + "type": { + "coding": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0301", - "code" : "ISO" + "system": "http://terminology.hl7.org/CodeSystem/v2-0301", + "code": "ISO" } ] }, - "system" : "urn:ietf:rfc:3986", - "value" : "2.16.840.1.114222.4.1.10080" + "system": "urn:ietf:rfc:3986", + "value": "2.16.840.1.114222.4.1.10080" } ] } }, { - "fullUrl" : "Patient/1707847040239572000.c4a5ef84-2bdc-4c8a-a9cc-4daf0244cfbb", - "resource" : { - "resourceType" : "Patient", - "id" : "1707847040239572000.c4a5ef84-2bdc-4c8a-a9cc-4daf0244cfbb", - "extension" : [ + "fullUrl": "Patient/1730739045468027000.a6aaa802-b1a3-4d6e-a44f-16db0b64663f", + "resource": { + "resourceType": "Patient", + "id": "1730739045468027000.a6aaa802-b1a3-4d6e-a44f-16db0b64663f", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/pid-patient", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/pid-patient", + "extension": [ { - "url" : "PID.8" + "url": "PID.8" }, { - "url" : "PID.24", - "valueString" : "Y" + "url": "PID.24", + "valueString": "Y" }, { - "url" : "PID.30", - "valueString" : "N" + "url": "PID.30", + "valueString": "N" } ] }, { - "url" : "http://hl7.org/fhir/StructureDefinition/patient-mothersMaidenName", - "valueHumanName" : { - "extension" : [ + "url": "http://hl7.org/fhir/StructureDefinition/patient-mothersMaidenName", + "valueHumanName": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", + "extension": [ { - "url" : "XPN.2", - "valueString" : "BB SARAH" + "url": "XPN.2", + "valueString": "BB SARAH" } ] } ], - "family" : "SMITH", - "given" : [ + "family": "SMITH", + "given": [ "BB SARAH" ] } } ], - "identifier" : [ + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cx-identifier", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cx-identifier", + "extension": [ { - "url" : "CX.5", - "valueString" : "MR" + "url": "CX.5", + "valueString": "MR" } ] }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "PID.3" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "PID.3" } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "code" : "MR" + "code": "MR" } ] }, - "value" : "11102779", - "assigner" : { - "reference" : "Organization/1707847040212466000.839717a1-adb9-4b95-a629-3cb2455bbe9c" + "value": "11102779", + "assigner": { + "reference": "Organization/1730739045436383000.143cca78-1d3b-49b5-855d-0b68ae8fd374" } } ], - "name" : [ + "name": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", + "extension": [ { - "url" : "XPN.2", - "valueString" : "BB SARAH" + "url": "XPN.2", + "valueString": "BB SARAH" }, { - "url" : "XPN.7", - "valueString" : "L" + "url": "XPN.7", + "valueString": "L" } ] } ], - "use" : "official", - "family" : "SMITH", - "given" : [ + "use": "official", + "family": "SMITH", + "given": [ "BB SARAH" ] } ], - "telecom" : [ + "telecom": [ { - "extension" : [ + "extension": [ { - "url" : "http://hl7.org/fhir/StructureDefinition/contactpoint-area", - "valueString" : "763" + "url": "http://hl7.org/fhir/StructureDefinition/contactpoint-area", + "valueString": "763" }, { - "url" : "http://hl7.org/fhir/StructureDefinition/contactpoint-local", - "valueString" : "555555" + "url": "http://hl7.org/fhir/StructureDefinition/contactpoint-local", + "valueString": "555555" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xtn-contact-point", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xtn-contact-point", + "extension": [ { - "url" : "XTN.3", - "valueString" : "PH" + "url": "XTN.3", + "valueString": "PH" }, { - "url" : "XTN.7", - "valueString" : "555555" + "url": "XTN.7", + "valueString": "555555" }, { - "url" : "XTN.9", - "valueString" : "(763)555-5555" + "url": "XTN.9", + "valueString": "(763)555-5555" } ] } ], - "system" : "phone", - "use" : "home" + "system": "phone", + "use": "home" } ], - "gender" : "male", - "birthDate" : "2023-05-04", - "_birthDate" : { - "extension" : [ + "gender": "male", + "birthDate": "2023-05-04", + "_birthDate": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", - "valueString" : "20230504131023-0500" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", + "valueString": "20230504131023-0500" }, { - "url" : "http://hl7.org/fhir/StructureDefinition/patient-birthTime", - "valueDateTime" : "2023-05-04T13:10:23-05:00" + "url": "http://hl7.org/fhir/StructureDefinition/patient-birthTime", + "valueDateTime": "2023-05-04T13:10:23-05:00" } ] }, - "deceasedBoolean" : false, - "address" : [ + "deceasedBoolean": false, + "address": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xad-address", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xad-address", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/sad-address-line", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/sad-address-line", + "extension": [ { - "url" : "SAD.1", - "valueString" : "555 STATE HIGHWAY 13" + "url": "SAD.1", + "valueString": "555 STATE HIGHWAY 13" } ] }, { - "url" : "XAD.7", - "valueCode" : "H" + "url": "XAD.7", + "valueCode": "H" } ] } ], - "use" : "home", - "line" : [ + "use": "home", + "line": [ "555 STATE HIGHWAY 13" ], - "city" : "DEER CREEK", - "district" : "OTTER TAIL", - "state" : "MN", - "postalCode" : "56527-9657", - "country" : "USA" + "city": "DEER CREEK", + "district": "OTTER TAIL", + "state": "MN", + "postalCode": "56527-9657", + "country": "USA" } ], - 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"value" : "CRPMRN" + "value": "CRPMRN" } ] } }, { - "fullUrl" : "RelatedPerson/1707847040228223000.eed99dd8-9b3a-4f18-8bf3-3e17975f6616", - "resource" : { - "resourceType" : "RelatedPerson", - "id" : "1707847040228223000.eed99dd8-9b3a-4f18-8bf3-3e17975f6616", - "identifier" : [ + "fullUrl": "RelatedPerson/1730739045452628000.7cc7bd01-5335-4089-bb4a-452daa11cff5", + "resource": { + "resourceType": "RelatedPerson", + "id": "1730739045452628000.7cc7bd01-5335-4089-bb4a-452daa11cff5", + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "http://hl7.org/fhir/StructureDefinition/identifier-checkDigit", - "valueString" : "SADIE" + "url": "http://hl7.org/fhir/StructureDefinition/identifier-checkDigit", + "valueString": "SADIE" }, { - "url" : "http://hl7.org/fhir/StructureDefinition/namingsystem-checkDigit", - "valueString" : "S" + "url": "http://hl7.org/fhir/StructureDefinition/namingsystem-checkDigit", + "valueString": "S" } ], - "value" : "SMITH" + "value": "SMITH" } ] } }, { - 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"extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/orc-common-order", + "extension": [ { - "url" : "orc-21-ordering-facility-name", - "valueReference" : { - "reference" : "Organization/1707847040252066000.153d3558-35e2-4828-8a93-fff1afee50ae" + "url": "orc-21-ordering-facility-name", + "valueReference": { + "reference": "Organization/1730739045482221000.12655f3b-3a76-4149-92c7-eab672b22b75" } }, { - "url" : "orc-21-ordering-facility-name", - "valueReference" : { - "reference" : "Organization/1707847040252956000.3d97593b-e670-40a5-a230-ddb929e5af4c" + "url": "orc-21-ordering-facility-name", + "valueReference": { + "reference": "Organization/1730739045483655000.fbf465a4-777d-44dd-84de-ab216725b063" } }, { - "url" : "orc-12-ordering-provider", - "valueReference" : { - "reference" : "Practitioner/1707847040254368000.50514b93-84f6-4b7a-873b-68c878820d87" + "url": "orc-12-ordering-provider", + "valueReference": { + "reference": "Practitioner/1730739045485318000.50da42d9-9ed8-49ca-8ce1-eb63a81a9606" } } ] }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/obr-observation-request", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/obr-observation-request", + "extension": [ { - "url" : "OBR.2", - "valueIdentifier" : { - "extension" : [ + "url": "OBR.2", + "valueIdentifier": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "EPIC" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "EPIC" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "1.2.840.114350.1.13.145.2.7.2.695071" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "1.2.840.114350.1.13.145.2.7.2.695071" }, { - 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"valueString" : "NPI" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-unknown-type" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "NPI" } ] }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xcn-practitioner", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xcn-practitioner", + "extension": [ { - "url" : "XCN.3", - "valueString" : "JANE" + "url": "XCN.3", + "valueString": "JANE" }, { - "url" : "XCN.10", - "valueString" : "L" + "url": "XCN.10", + "valueString": "L" } ] }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "ORC.12" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "ORC.12" } ], - "identifier" : [ + "identifier": [ { - "type" : { - "coding" : [ + "type": { + "coding": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/codeable-concept-id", - "valueBoolean" : true + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/codeable-concept-id", + "valueBoolean": true } ], - "code" : "NPI" + "code": "NPI" } ] }, - "value" : "1265136360", - "assigner" : { - "reference" : "Organization/1707847040246197000.f878df3a-5f70-4d4b-94c4-458c2cf2f17d" + "value": "1265136360", + "assigner": { + "reference": "Organization/1730739045476392000.19543a23-10bc-47cb-9da4-707a24b3a6ed" } } ], - "name" : [ + "name": [ { - "use" : "official", - "family" : "JONES", - "given" : [ + "use": "official", + "family": "JONES", + "given": [ "JANE" ] } @@ -679,22 +673,22 @@ } }, { - "fullUrl" : "Organization/1707847040248788000.9a03e625-1b10-4b57-8540-fbc5705f0454", - "resource" : { - "resourceType" : "Organization", - "id" : "1707847040248788000.9a03e625-1b10-4b57-8540-fbc5705f0454", - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/organization-name-type", - "valueCoding" : { - "extension" : [ + "fullUrl": "Organization/1730739045479084000.cda1b269-0a63-4666-a1bd-d140ad91e24d", + "resource": { + "resourceType": "Organization", + "id": "1730739045479084000.cda1b269-0a63-4666-a1bd-d140ad91e24d", + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/organization-name-type", + "valueCoding": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", - "valueCodeableConcept" : { - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", + "valueCodeableConcept": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "XON.2" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "XON.2" } ] } @@ -703,78 +697,72 @@ } }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xon-organization", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xon-organization", + "extension": [ { - "url" : "XON.10", - "valueString" : "1043269798" + "url": "XON.10", + "valueString": "1043269798" } ] } ], - "identifier" : [ + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "CMS" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-unknown-type" - }, + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "CMS" } ] } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0203", - "code" : "NPI" + "system": "http://terminology.hl7.org/CodeSystem/v2-0203", + "code": "NPI" } ] }, - "value" : "1043269798" + "value": "1043269798" } ], - "name" : "ST. CLOUD HOSPITAL" + "name": "ST. 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"url" : "OBX.11", - "valueString" : "O" + "url": "OBX.29", + "valueId": "QST" }, { - "url" : "OBX.29", - "valueId" : "QST" + "url": "OBX.11", + "valueString": "O" } ] } ], - "status" : "unknown", - "subject" : { - "reference" : "Patient/1707847040239572000.c4a5ef84-2bdc-4c8a-a9cc-4daf0244cfbb" + "status": "unknown", + "subject": { + "reference": "Patient/1730739045468027000.a6aaa802-b1a3-4d6e-a44f-16db0b64663f" }, - "effectiveDateTime" : "2023-05-06T05:00:00-05:00", - "_effectiveDateTime" : { - "extension" : [ + "effectiveDateTime": "2023-05-06T05:00:00-05:00", + "_effectiveDateTime": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", - "valueString" : "20230506050000-0500" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", + "valueString": "20230506050000-0500" } ] }, - "valueString" : "Lakeridge Health Revere" + "valueString": "Lakeridge Health Revere" } }, { - "fullUrl" : "Specimen/1707847040478484000.3fbc2652-a981-4cda-b38d-59f8a4aecdac", - "resource" : { - "resourceType" : "Specimen", - "id" : "1707847040478484000.3fbc2652-a981-4cda-b38d-59f8a4aecdac", - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Segment", - "valueString" : "SPM" + "fullUrl": "Specimen/1730739045723761000.769edddd-9a44-4394-af6d-bb7f2e6478e9", + "resource": { + "resourceType": "Specimen", + "id": "1730739045723761000.769edddd-9a44-4394-af6d-bb7f2e6478e9", + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Segment", + "valueString": "SPM" } ] } diff --git a/prime-router/src/testIntegration/resources/datatests/HL7_to_FHIR/sample_orm_20230809-001.fhir b/prime-router/src/testIntegration/resources/datatests/HL7_to_FHIR/sample_orm_20230809-001.fhir index 1848c5a801e..03b6e85a36e 100644 --- a/prime-router/src/testIntegration/resources/datatests/HL7_to_FHIR/sample_orm_20230809-001.fhir +++ b/prime-router/src/testIntegration/resources/datatests/HL7_to_FHIR/sample_orm_20230809-001.fhir @@ -1,675 +1,669 @@ { - "resourceType" : "Bundle", - "id" : "1707847071537137000.07a221fd-ee87-4d5a-a1e7-13b79535defc", - "meta" : { - "lastUpdated" : "2024-02-13T11:57:51.542-06:00" + "resourceType": "Bundle", + "id": "1730738730597348000.b5a72365-7902-4cf3-a770-aae6df5dd1f9", + "meta": { + "lastUpdated": "2024-11-04T11:45:30.608-05:00" }, - "identifier" : { - "system" : "https://reportstream.cdc.gov/prime-router", - "value" : "31808297" + "identifier": { + "system": "https://reportstream.cdc.gov/prime-router", + "value": "31808297" }, - "type" : "message", - "timestamp" : "2023-05-06T05:29:16.000-05:00", - "entry" : [ + "type": "message", + "timestamp": "2023-05-06T06:29:16.000-04:00", + "entry": [ { - "fullUrl" : "MessageHeader/87c2d0db-6f31-3666-b9e2-7152e039c11f", - "resource" : { - "resourceType" : "MessageHeader", - "id" : "87c2d0db-6f31-3666-b9e2-7152e039c11f", - "meta" : { - "tag" : [ + "fullUrl": "MessageHeader/1730738730688276000.3886156a-8ef5-419f-96ba-42fc39d41be9", + "resource": { + "resourceType": "MessageHeader", + "id": "1730738730688276000.3886156a-8ef5-419f-96ba-42fc39d41be9", + "meta": { + "tag": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0103", - "code" : "P" + "system": "http://terminology.hl7.org/CodeSystem/v2-0103", + "code": "P" } ] }, - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/msh-message-header", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/msh-message-header", + "extension": [ { - "url" : "MSH.7", - "valueString" : "20230506052916-0500" + "url": "MSH.7", + "valueString": "20230506052916-0500" }, { - "url" : "MSH.15", - "valueString" : "AL" + "url": "MSH.15", + "valueString": "AL" }, { - "url" : "MSH.16", - "valueString" : "AL" + "url": "MSH.16", + "valueString": "AL" }, { - "url" : "MSH.21", - "valueIdentifier" : { - "extension" : [ + "url": "MSH.21", + "valueIdentifier": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.9.82" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.82" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "value" : "LAB_PRU_COMPONENT" + "value": "LAB_PRU_COMPONENT" } }, { - "url" : "MSH.21", - "valueIdentifier" : { - "extension" : [ + "url": "MSH.21", + "valueIdentifier": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.9.22" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.22" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "value" : "LAB_TO_COMPONENT" + "value": "LAB_TO_COMPONENT" } }, { - "url" : "MSH.21", - "valueIdentifier" : { - "extension" : [ + "url": "MSH.21", + "valueIdentifier": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "2.16.840.1.113883.9.22" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.22" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "value" : "LAB_THREE_COMPONENT" + "value": "LAB_THREE_COMPONENT" } } ] } ], - "eventCoding" : { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0003", - "code" : "O01", - "display" : "ORM^O01^ORM_O01" + "eventCoding": { + "system": "http://terminology.hl7.org/CodeSystem/v2-0003", + "code": "O01", + "display": "ORM^O01^ORM_O01" }, - "destination" : [ + "destination": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "natus.health.state.mn.us" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "natus.health.state.mn.us" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueString" : "DNS" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueString": "DNS" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "MSH.5" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "MSH.5" } ], - "name" : "NATUS", - "receiver" : { - "reference" : "Organization/1707847071695889000.df447fd8-6a34-4ef9-ba1c-820754f56c3a" + "name": "NATUS", + "receiver": { + "reference": "Organization/1730738730687016000.cca4c775-6507-4106-8e64-1d3c3ba8ec15" } } ], - "sender" : { - "reference" : "Organization/1707847071629931000.d48536cc-4730-46ca-948e-251ee9bb56c5" + "sender": { + "reference": "Organization/1730738730665862000.6238b114-270b-4f77-891a-39ac66cf8caa" }, - "source" : { - "extension" : [ + "source": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "Epic" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "Epic" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "1.2.840.114350.1.13.145.2.7.2.695071" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "1.2.840.114350.1.13.145.2.7.2.695071" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueString" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueString": "ISO" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "MSH.3" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "MSH.3" } ], - "endpoint" : "urn:oid:1.2.840.114350.1.13.145.2.7.2.695071" + "endpoint": "urn:oid:1.2.840.114350.1.13.145.2.7.2.695071" } } }, { - "fullUrl" : "Organization/1707847071629931000.d48536cc-4730-46ca-948e-251ee9bb56c5", - "resource" : { - "resourceType" : "Organization", - "id" : "1707847071629931000.d48536cc-4730-46ca-948e-251ee9bb56c5", - "identifier" : [ + "fullUrl": "Organization/1730738730665862000.6238b114-270b-4f77-891a-39ac66cf8caa", + "resource": { + "resourceType": "Organization", + "id": "1730738730665862000.6238b114-270b-4f77-891a-39ac66cf8caa", + "identifier": [ { - 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"extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "MSH.6" + "fullUrl": "Organization/1730738730687016000.cca4c775-6507-4106-8e64-1d3c3ba8ec15", + "resource": { + "resourceType": "Organization", + "id": "1730738730687016000.cca4c775-6507-4106-8e64-1d3c3ba8ec15", + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "MSH.6" } ], - "identifier" : [ + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "HD.1" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "HD.1" } ], - "value" : "MN Public Health Lab" + "value": "MN Public Health Lab" }, { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "HD.2,HD.3" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "HD.2,HD.3" } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0301", - "code" : "ISO" + "system": "http://terminology.hl7.org/CodeSystem/v2-0301", + "code": "ISO" } ] }, - "system" : "urn:ietf:rfc:3986", - "value" : "2.16.840.1.114222.4.1.10080" + "system": "urn:ietf:rfc:3986", + "value": "2.16.840.1.114222.4.1.10080" } ] } }, { - "fullUrl" : "Patient/1707847072401619000.95ba08d1-b846-4305-b0dc-8024ffe67c22", - "resource" : { - "resourceType" : "Patient", - "id" : "1707847072401619000.95ba08d1-b846-4305-b0dc-8024ffe67c22", - "extension" : [ + "fullUrl": "Patient/1730738731286343000.2d0c8167-3311-4d33-8612-03527b335873", + "resource": { + "resourceType": "Patient", + "id": "1730738731286343000.2d0c8167-3311-4d33-8612-03527b335873", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/pid-patient", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/pid-patient", + "extension": [ { - "url" : "PID.8" + "url": "PID.8" }, { - "url" : "PID.24", - "valueString" : "Y" + "url": "PID.24", + "valueString": "Y" }, { - "url" : "PID.30", - "valueString" : "N" + "url": "PID.30", + "valueString": "N" } ] }, { - "url" : "http://hl7.org/fhir/StructureDefinition/patient-mothersMaidenName", - "valueHumanName" : { - "extension" : [ + "url": "http://hl7.org/fhir/StructureDefinition/patient-mothersMaidenName", + "valueHumanName": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", + "extension": [ { - "url" : "XPN.2", - "valueString" : "BB SARAH" + "url": "XPN.2", + "valueString": "BB SARAH" } ] } ], - "family" : "SMITH", - "given" : [ + "family": "SMITH", + "given": [ "BB SARAH" ] } } ], - "identifier" : [ + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cx-identifier", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cx-identifier", + "extension": [ { - "url" : "CX.5", - "valueString" : "MR" + "url": "CX.5", + "valueString": "MR" } ] }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "PID.3" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "PID.3" } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "code" : "MR" + "code": "MR" } ] }, - "value" : "11102779", - "assigner" : { - "reference" : "Organization/1707847072345357000.1dd41490-86e3-48b4-9eb2-9c0b500b97b7" + "value": "11102779", + "assigner": { + "reference": "Organization/1730738731258707000.cf31cadb-f202-4bde-aa3e-58aeeb2b27ac" } } ], - "name" : [ + "name": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", + "extension": [ { - "url" : "XPN.2", - "valueString" : "BB SARAH" + "url": "XPN.2", + "valueString": "BB SARAH" }, { - "url" : "XPN.7", - "valueString" : "L" + "url": "XPN.7", + "valueString": "L" } ] } ], - "use" : "official", - "family" : "SMITH", - "given" : [ + "use": "official", + "family": "SMITH", + "given": [ "BB SARAH" ] } ], - "telecom" : [ + "telecom": [ { - "extension" : [ + "extension": [ { - "url" : "http://hl7.org/fhir/StructureDefinition/contactpoint-area", - "valueString" : "763" + "url": "http://hl7.org/fhir/StructureDefinition/contactpoint-area", + "valueString": "763" }, { - "url" : "http://hl7.org/fhir/StructureDefinition/contactpoint-local", - "valueString" : "555555" + "url": "http://hl7.org/fhir/StructureDefinition/contactpoint-local", + "valueString": "555555" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xtn-contact-point", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xtn-contact-point", + "extension": [ { - "url" : "XTN.3", - "valueString" : "PH" + "url": "XTN.3", + "valueString": "PH" }, { - "url" : "XTN.7", - "valueString" : "555555" + "url": "XTN.7", + "valueString": "555555" }, { - "url" : "XTN.9", - "valueString" : "(763)555-5555" + "url": "XTN.9", + "valueString": "(763)555-5555" } ] } ], - "system" : "phone", - "use" : "home" + "system": "phone", + "use": "home" } ], - "gender" : "male", - "birthDate" : "2023-05-04", - "_birthDate" : { - "extension" : [ + "gender": "male", + "birthDate": "2023-05-04", + "_birthDate": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", - "valueString" : "20230504131023-0500" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", + "valueString": "20230504131023-0500" }, { - "url" : "http://hl7.org/fhir/StructureDefinition/patient-birthTime", - "valueDateTime" : "2023-05-04T13:10:23-05:00" + "url": "http://hl7.org/fhir/StructureDefinition/patient-birthTime", + "valueDateTime": "2023-05-04T13:10:23-05:00" } ] }, - "deceasedBoolean" : false, - "address" : [ + "deceasedBoolean": false, + "address": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xad-address", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xad-address", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/sad-address-line", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/sad-address-line", + "extension": [ { - "url" : "SAD.1", - "valueString" : "555 STATE HIGHWAY 13" + "url": "SAD.1", + "valueString": "555 STATE HIGHWAY 13" } ] }, { - "url" : "XAD.7", - "valueCode" : "H" + "url": "XAD.7", + "valueCode": "H" } ] } ], - "use" : "home", - "line" : [ + "use": "home", + "line": [ "555 STATE HIGHWAY 13" ], - "city" : "DEER CREEK", - "district" : "OTTER TAIL", - "state" : "MN", - "postalCode" : "56527-9657", - "country" : "USA" + "city": "DEER CREEK", + "district": "OTTER TAIL", + "state": "MN", + "postalCode": "56527-9657", + "country": "USA" } ], - 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"value" : "CRPMRN" + "value": "CRPMRN" } ] } }, { - "fullUrl" : "RelatedPerson/1707847072385413000.1cb0efd6-805a-4a69-a864-783a9629dd0e", - "resource" : { - "resourceType" : "RelatedPerson", - "id" : "1707847072385413000.1cb0efd6-805a-4a69-a864-783a9629dd0e", - "identifier" : [ + "fullUrl": "RelatedPerson/1730738731274605000.5d0a2328-c431-4aab-9064-26de004d7d38", + "resource": { + "resourceType": "RelatedPerson", + "id": "1730738731274605000.5d0a2328-c431-4aab-9064-26de004d7d38", + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "http://hl7.org/fhir/StructureDefinition/identifier-checkDigit", - "valueString" : "SADIE" + "url": "http://hl7.org/fhir/StructureDefinition/identifier-checkDigit", + "valueString": "SADIE" }, { - "url" : "http://hl7.org/fhir/StructureDefinition/namingsystem-checkDigit", - "valueString" : "S" + "url": "http://hl7.org/fhir/StructureDefinition/namingsystem-checkDigit", + "valueString": "S" } ], - "value" : "SMITH" + "value": "SMITH" } ] } }, { - 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"extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/orc-common-order", + "extension": [ { - "url" : "orc-21-ordering-facility-name", - "valueReference" : { - "reference" : "Organization/1707847072417482000.4522a04a-b675-4e79-93f6-351dadf7c4bc" + "url": "orc-21-ordering-facility-name", + "valueReference": { + "reference": "Organization/1730738731309095000.03da74e9-6434-4ded-9742-09c5ab19932f" } }, { - "url" : "orc-21-ordering-facility-name", - "valueReference" : { - "reference" : "Organization/1707847072418735000.43429617-4700-4fdd-b343-1f0f85892bab" + "url": "orc-21-ordering-facility-name", + "valueReference": { + "reference": "Organization/1730738731310360000.2f784e80-0a21-4ad9-87ff-c5e7f5d5afd5" } }, { - "url" : "orc-12-ordering-provider", - "valueReference" : { - "reference" : "Practitioner/1707847072420860000.8c4240bd-15dc-46dd-942e-2b10821f80b8" + "url": "orc-12-ordering-provider", + "valueReference": { + "reference": "Practitioner/1730738731311977000.d7ea85e0-64d8-4234-ad65-abcf714feec6" } } ] }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/obr-observation-request", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/obr-observation-request", + "extension": [ { - "url" : "OBR.2", - "valueIdentifier" : { - "extension" : [ + "url": "OBR.2", + "valueIdentifier": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "EPIC" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "EPIC" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "1.2.840.114350.1.13.145.2.7.2.695071" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "1.2.840.114350.1.13.145.2.7.2.695071" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "value" : "421832901" + "value": "421832901" } } ] } ], - "identifier" : [ + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "ORC.2" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "ORC.2" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "EPIC" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "EPIC" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", - "valueString" : "1.2.840.114350.1.13.145.2.7.2.695071" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "1.2.840.114350.1.13.145.2.7.2.695071" }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", - "valueCode" : "ISO" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" } ] } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0203", - "code" : "PLAC" + "system": "http://terminology.hl7.org/CodeSystem/v2-0203", + "code": "PLAC" } ] }, - "value" : "421832901" + "value": "421832901" } ], - "status" : "unknown", - "subject" : { - "reference" : "Patient/1707847072401619000.95ba08d1-b846-4305-b0dc-8024ffe67c22" + "status": "unknown", + "subject": { + "reference": "Patient/1730738731286343000.2d0c8167-3311-4d33-8612-03527b335873" }, - "authoredOn" : "2023-05-06T05:29:13-05:00", - "_authoredOn" : { - "extension" : [ + "authoredOn": "2023-05-06T05:29:13-05:00", + "_authoredOn": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", - "valueString" : "20230506052913-0500" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", + "valueString": "20230506052913-0500" } ] }, - "requester" : { - "reference" : "PractitionerRole/1707847072409054000.78e0d217-4a3c-4280-8c88-4310812360f2" + "requester": { + "reference": "PractitionerRole/1730738731302914000.403c7e15-3b25-4800-bbdd-abf7589450cb" } } }, { - "fullUrl" : "Organization/1707847072409413000.5daa8c0d-1c1a-400b-b0c0-ad099370d851", - "resource" : { - "resourceType" : "Organization", - "id" : "1707847072409413000.5daa8c0d-1c1a-400b-b0c0-ad099370d851", - "identifier" : [ + "fullUrl": "Organization/1730738731303356000.1d550b83-438d-4d19-9998-5434be62a215", + "resource": { + "resourceType": "Organization", + "id": "1730738731303356000.1d550b83-438d-4d19-9998-5434be62a215", + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "HD.1" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "HD.1" } ], - "value" : "NPI" + "value": "NPI" } ] } }, { - "fullUrl" : "Practitioner/1707847072410737000.cabd7aae-2608-41a0-af88-d82e23869a95", - "resource" : { - "resourceType" : "Practitioner", - "id" : "1707847072410737000.cabd7aae-2608-41a0-af88-d82e23869a95", - "extension" : [ + "fullUrl": "Practitioner/1730738731304793000.ea2b1372-fc3a-44cc-ad74-4ca94fc13255", + "resource": { + "resourceType": "Practitioner", + "id": "1730738731304793000.ea2b1372-fc3a-44cc-ad74-4ca94fc13255", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "NPI" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-unknown-type" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "NPI" } ] }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xcn-practitioner", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xcn-practitioner", + "extension": [ { - "url" : "XCN.3", - "valueString" : "JANE" + "url": "XCN.3", + "valueString": "JANE" }, { - "url" : "XCN.10", - "valueString" : "L" + "url": "XCN.10", + "valueString": "L" } ] }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "ORC.12" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "ORC.12" } ], - "identifier" : [ + "identifier": [ { - "type" : { - "coding" : [ + "type": { + "coding": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/codeable-concept-id", - "valueBoolean" : true + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/codeable-concept-id", + "valueBoolean": true } ], - "code" : "NPI" + "code": "NPI" } ] }, - "value" : "1265136360", - "assigner" : { - "reference" : "Organization/1707847072409413000.5daa8c0d-1c1a-400b-b0c0-ad099370d851" + "value": "1265136360", + "assigner": { + "reference": "Organization/1730738731303356000.1d550b83-438d-4d19-9998-5434be62a215" } } ], - "name" : [ + "name": [ { - "use" : "official", - "family" : "JONES", - "given" : [ + "use": "official", + "family": "JONES", + "given": [ "JANE" ] } @@ -677,22 +671,22 @@ } }, { - "fullUrl" : "Organization/1707847072412231000.48789979-62c9-477f-81d8-38a437a12d3f", - "resource" : { - "resourceType" : "Organization", - "id" : "1707847072412231000.48789979-62c9-477f-81d8-38a437a12d3f", - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/organization-name-type", - "valueCoding" : { - "extension" : [ + "fullUrl": "Organization/1730738731306205000.ae1ce8c4-b120-40f7-9470-5180ef5aba42", + "resource": { + "resourceType": "Organization", + "id": "1730738731306205000.ae1ce8c4-b120-40f7-9470-5180ef5aba42", + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/organization-name-type", + "valueCoding": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", - "valueCodeableConcept" : { - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", + "valueCodeableConcept": { + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "XON.2" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "XON.2" } ] } @@ -701,78 +695,72 @@ } }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xon-organization", - "extension" : [ + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xon-organization", + "extension": [ { - "url" : "XON.10", - "valueString" : "1043269798" + "url": "XON.10", + "valueString": "1043269798" } ] } ], - "identifier" : [ + "identifier": [ { - "extension" : [ + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", - "extension" : [ - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", - "valueString" : "CMS" - }, - { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-unknown-type" - }, + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type" + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/namespace-id", + "valueString": "CMS" } ] } ], - "type" : { - "coding" : [ + "type": { + "coding": [ { - "system" : "http://terminology.hl7.org/CodeSystem/v2-0203", - "code" : "NPI" + "system": "http://terminology.hl7.org/CodeSystem/v2-0203", + "code": "NPI" } ] }, - "value" : "1043269798" + "value": "1043269798" } ], - "name" : "ST. CLOUD HOSPITAL" + "name": "ST. 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"value": "CDC PRIME - Atlanta" }, - "given" : [ "LUDWIG", "B" ], - "prefix" : [ "DR" ], - "suffix" : [ "2ND", "MD", "MD" ], - "period" : { - "start" : "2022-05-01T10:25:31-04:00", - "end" : "2023-05-01T10:25:31-04:00" + { + "type": { + "coding": [ + { + "system": "http://terminology.hl7.org/CodeSystem/v2-0301" + } + ] + }, + "system": "urn:ietf:rfc:3986", + "value": "2.16.840.1.114222.4.1.237821" } - } - } ] - } - }, { - "fullUrl" : "Provenance/1710888271935899000.d8bb5f67-690c-4080-9999-cda105564793", - "resource" : { - "resourceType" : "Provenance", - "id" : "1710888271935899000.d8bb5f67-690c-4080-9999-cda105564793", - "target" : [ { - "reference" : "Patient/1710888271932341000.e0904367-5f0d-40fe-b6e6-d6016624a63c" - } ], - "recorded" : "2024-03-19T16:44:31Z", - "activity" : { - "coding" : [ { - "system" : "https://terminology.hl7.org/CodeSystem/v3-DataOperation", - "code" : "UPDATE" - } ] + ] } - } - }, { - "fullUrl" : "RelatedPerson/1710888271943666000.394519d3-bb80-46db-abea-eb7c34971002", - "resource" : { - "resourceType" : "RelatedPerson", - "id" : "1710888271943666000.394519d3-bb80-46db-abea-eb7c34971002", - "extension" : [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Segment", - "valueString" : "NK1" - } ], - "patient" : { - "reference" : "Patient/1710888271932341000.e0904367-5f0d-40fe-b6e6-d6016624a63c" - }, - "name" : [ { - "extension" : [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "NK1.2" - }, { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", - "extension" : [ { - "url" : "XPN.2", - "valueString" : "LUDWIG" - }, { - "url" : "XPN.3", - "valueString" : "B" - }, { - "url" : "XPN.14", - "valueString" : "MD" - }, { - "url" : "XPN.4", - "valueString" : "2ND" - }, { - "url" : "XPN.6", - "valueString" : "MD" - }, { - "url" : "XPN.7", - "valueString" : "B" - }, { - "url" : "XPN.8", - "valueString" : "A" - }, { - "url" : "XPN.9", - "valueCodeableConcept" : { - "extension" : [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", - "valueString" : "NK1.2" - } ], - "coding" : [ { - "extension" : [ { - "url" : "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", - "valueString" : "coding" - } ], - "code" : "Coding" - } ] + }, + { + "fullUrl": "Patient/1730473386502079000.ec3d8959-11f3-45e2-b792-50467dca2fac", + "resource": { + "resourceType": "Patient", + "id": "1730473386502079000.ec3d8959-11f3-45e2-b792-50467dca2fac", + "name": [ + { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", + "extension": [ + { + "url": "XPN.2", + "valueString": "BB SARAH" + }, + { + "url": "XPN.7", + "valueString": "L" + } + ] + } + ], + "use": "official", + "family": "SMITH", + "given": [ + "BB SARAH" + ] + } + ], + "contact": [ + { + "name": { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", + "extension": [ + { + "url": "XPN.2", + "valueString": "LUDWIG" + }, + { + "url": "XPN.3", + "valueString": "B" + }, + { + "url": "XPN.14", + "valueString": "MD" + }, + { + "url": "XPN.4", + "valueString": "2ND" + }, + { + "url": "XPN.6", + "valueString": "MD" + }, + { + "url": "XPN.7", + "valueString": "B" + }, + { + "url": "XPN.8", + "valueString": "A" + }, + { + "url": "XPN.9", + "valueCodeableConcept": { + "coding": [ + { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", + "valueString": "coding" + } + ], + "code": "Coding" + } + ] + } + }, + { + "url": "XPN.10", + "extension": [ + { + "url": "XPN.10.2", + "valueString": "20230501102531-0400" + }, + { + "url": "XPN.10.1", + "valueString": "20220501102531-0400" + } + ] + } + ] + }, + { + "url": "http://hl7.org/fhir/StructureDefinition/humanname-assembly-order", + "valueCode": "F" + } + ], + "use": "official", + "family": "BEETHOVEN", + "_family": { + "extension": [ + { + "url": "http://hl7.org/fhir/StructureDefinition/humanname-own-prefix", + "valueString": "VAN" + }, + { + "url": "http://hl7.org/fhir/StructureDefinition/humanname-own-name", + "valueString": "BEETHOVEN" + }, + { + "url": "http://hl7.org/fhir/StructureDefinition/humanname-partner-prefix", + "valueString": "VAL" + }, + { + "url": "http://hl7.org/fhir/StructureDefinition/humanname-partner-name", + "valueString": "ROGER" + } + ] + }, + "given": [ + "LUDWIG", + "B" + ], + "prefix": [ + "DR" + ], + "suffix": [ + "2ND", + "MD", + "MD" + ], + "period": { + "start": "2022-05-01T10:25:31-04:00", + "_start": { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", + "valueString": "20220501102531-0400" + } + ] + }, + "end": "2023-05-01T10:25:31-04:00", + "_end": { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", + "valueString": "20230501102531-0400" + } + ] + } + } } - }, { - "url" : "XPN.10", - "extension" : [ { - "url" : "XPN.10.2", - "valueString" : "20230501102531-0400" - }, { - "url" : "XPN.10.1", - "valueString" : "20220501102531-0400" - } ] - } ] - }, { - "url" : "http://hl7.org/fhir/StructureDefinition/humanname-assembly-order", - "valueCode" : "F" - } ], - "use" : "official", - "family" : "BEETHOVEN", - "_family" : { - "extension" : [ { - "url" : "http://hl7.org/fhir/StructureDefinition/humanname-own-prefix", - "valueString" : "VAN" - }, { - "url" : "http://hl7.org/fhir/StructureDefinition/humanname-own-name", - "valueString" : "BEETHOVEN" - }, { - "url" : "http://hl7.org/fhir/StructureDefinition/humanname-partner-prefix", - "valueString" : "VAL" - }, { - "url" : "http://hl7.org/fhir/StructureDefinition/humanname-partner-name", - "valueString" : "ROGER" - } ] - }, - "given" : [ "LUDWIG", "B" ], - "prefix" : [ "DR" ], - "suffix" : [ "2ND", "MD", "MD" ], - "period" : { - "start" : "2022-05-01T10:25:31-04:00", - "end" : "2023-05-01T10:25:31-04:00" + } + ] + } + }, + { + "fullUrl": "Provenance/1730473386504021000.6d9a256a-e7be-40fe-a2ae-705fadf0a2d9", + "resource": { + "resourceType": "Provenance", + "id": "1730473386504021000.6d9a256a-e7be-40fe-a2ae-705fadf0a2d9", + "target": [ + { + "reference": "Patient/1730473386502079000.ec3d8959-11f3-45e2-b792-50467dca2fac" + } + ], + "recorded": "2024-11-01T11:03:06Z", + "activity": { + "coding": [ + { + "system": "https://terminology.hl7.org/CodeSystem/v3-DataOperation", + "code": "UPDATE" + } + ] } - } ] + } + }, + { + "fullUrl": "RelatedPerson/1730473386507739000.c00cb52a-c266-4876-a403-3a4ff26a5783", + "resource": { + "resourceType": "RelatedPerson", + "id": "1730473386507739000.c00cb52a-c266-4876-a403-3a4ff26a5783", + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Segment", + "valueString": "NK1" + } + ], + "patient": { + "reference": "Patient/1730473386502079000.ec3d8959-11f3-45e2-b792-50467dca2fac" + }, + "name": [ + { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "NK1.2" + }, + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/xpn-human-name", + "extension": [ + { + "url": "XPN.2", + "valueString": "LUDWIG" + }, + { + "url": "XPN.3", + "valueString": "B" + }, + { + "url": "XPN.14", + "valueString": "MD" + }, + { + "url": "XPN.4", + "valueString": "2ND" + }, + { + "url": "XPN.6", + "valueString": "MD" + }, + { + "url": "XPN.7", + "valueString": "B" + }, + { + "url": "XPN.8", + "valueString": "A" + }, + { + "url": "XPN.9", + "valueCodeableConcept": { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2Field", + "valueString": "NK1.2" + } + ], + "coding": [ + { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/cwe-coding", + "valueString": "coding" + } + ], + "code": "Coding" + } + ] + } + }, + { + "url": "XPN.10", + "extension": [ + { + "url": "XPN.10.2", + "valueString": "20230501102531-0400" + }, + { + "url": "XPN.10.1", + "valueString": "20220501102531-0400" + } + ] + } + ] + }, + { + "url": "http://hl7.org/fhir/StructureDefinition/humanname-assembly-order", + "valueCode": "F" + } + ], + "use": "official", + "family": "BEETHOVEN", + "_family": { + "extension": [ + { + "url": "http://hl7.org/fhir/StructureDefinition/humanname-own-prefix", + "valueString": "VAN" + }, + { + "url": "http://hl7.org/fhir/StructureDefinition/humanname-own-name", + "valueString": "BEETHOVEN" + }, + { + "url": "http://hl7.org/fhir/StructureDefinition/humanname-partner-prefix", + "valueString": "VAL" + }, + { + "url": "http://hl7.org/fhir/StructureDefinition/humanname-partner-name", + "valueString": "ROGER" + } + ] + }, + "given": [ + "LUDWIG", + "B" + ], + "prefix": [ + "DR" + ], + "suffix": [ + "2ND", + "MD", + "MD" + ], + "period": { + "start": "2022-05-01T10:25:31-04:00", + "_start": { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", + "valueString": "20220501102531-0400" + } + ] + }, + "end": "2023-05-01T10:25:31-04:00", + "_end": { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time", + "valueString": "20230501102531-0400" + } + ] + } + } + } + ] + } } - } ] + ] } \ No newline at end of file From c3fc657cb92a57ee0a2ee7438469f476cdfeeeb1 Mon Sep 17 00:00:00 2001 From: matts <22215332+devopsmatt@users.noreply.github.com> Date: Wed, 13 Nov 2024 12:12:37 -0800 Subject: [PATCH 2/5] Update alert_PD_schedule_Slack.yml (#16535) Change hook for Slack to SLACK_NOTIFICATIONS_WEBHOOK_URL for PD scheduling alerts --- .github/workflows/alert_PD_schedule_Slack.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/alert_PD_schedule_Slack.yml b/.github/workflows/alert_PD_schedule_Slack.yml index e9593ec4d9c..917cb93b9db 100644 --- a/.github/workflows/alert_PD_schedule_Slack.yml +++ b/.github/workflows/alert_PD_schedule_Slack.yml @@ -82,7 +82,7 @@ jobs: 🔸"Next": *"${{ env.Schedules_oncallSchedule_3_NextPersonName }}"* : \`"${{ env.Schedules_oncallSchedule_3_NextFrom }}"\` _until_ \`"${{ env.Schedules_oncallSchedule_3_NextUntil }}"\` icon-emoji: ':alarm_clock:' channel: ${{ env.channel }} - webhook-url: ${{ secrets.SLACK_WEBHOOK_URL }} + webhook-url: ${{ secrets.SLACK_NOTIFICATIONS_WEBHOOK_URL }} color: good PDAlert_WeekDays: @@ -133,5 +133,5 @@ jobs: ❗"Now": *"${{ env.Schedules_oncallSchedule_3_OnCallPersonName }}"* icon-emoji: ':alarm_clock:' channel: ${{ env.channel }} - webhook-url: ${{ secrets.SLACK_WEBHOOK_URL }} + webhook-url: ${{ secrets.SLACK_NOTIFICATIONS_WEBHOOK_URL }} color: good From b5b9d3f5aa71f152e8fd5013cde93933fd8ad4f3 Mon Sep 17 00:00:00 2001 From: matts <22215332+devopsmatt@users.noreply.github.com> Date: Wed, 13 Nov 2024 12:38:34 -0800 Subject: [PATCH 3/5] Update alert_PD_schedule_Slack.yml (#16537) Temporarily change channel to Aq's #temp-cdc-rs-notifications channel for testing. --- .github/workflows/alert_PD_schedule_Slack.yml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/.github/workflows/alert_PD_schedule_Slack.yml b/.github/workflows/alert_PD_schedule_Slack.yml index 917cb93b9db..19b054ee274 100644 --- a/.github/workflows/alert_PD_schedule_Slack.yml +++ b/.github/workflows/alert_PD_schedule_Slack.yml @@ -5,7 +5,8 @@ on: - cron: "7 13 * * Mon" #UTC-5 env: - channel: prime-reportstream-engineering + channel: temp-cdc-rs-notifications + # prime-reportstream-engineering jobs: pre_job: From ec79b357e17a8c5bdb81c7bf38625001a30a26c5 Mon Sep 17 00:00:00 2001 From: Arnej <118766341+arnejduranovic@users.noreply.github.com> Date: Thu, 14 Nov 2024 09:20:15 -0600 Subject: [PATCH 4/5] Give CDC flexion team codeowner access to Flexion related folders (#16538) --- .github/CODEOWNERS | 2 ++ 1 file changed, 2 insertions(+) diff --git a/.github/CODEOWNERS b/.github/CODEOWNERS index 1e716fcb574..700d5ad089c 100644 --- a/.github/CODEOWNERS +++ b/.github/CODEOWNERS @@ -6,6 +6,8 @@ /operations/ @cdcgov/PRIME-ReportStream-DevOps /CODEOWNERS @cdcgov/PRIME-ReportStream-DevOps /prime-router/ @cdcgov/PRIME-ReportStream-CODEOWNERS-backend +/prime-router/src/main/resources/metadata/fhir_transforms/senders/Flexion @cdcgov/trusted-intermediary +/prime-router/settings/STLTs/Flexion @cdcgov/trusted-intermediary # The CODEOWNERS file takes the last matching line into account. You can make definitions with empty owners to specify paths/files without an owner. /prime-router/settings/prod/ From 8d3bdf8ef83895941cd07dc578c8c70a8a6bb43b Mon Sep 17 00:00:00 2001 From: Lucero Velasco <165824244+lucero-v@users.noreply.github.com> Date: Thu, 14 Nov 2024 10:36:22 -0700 Subject: [PATCH 5/5] added transform for converting datetimes to mountain time (#16542) --- .../hl7/utils/CustomFHIRFunctions.kt | 43 ++++++++++++++----- .../common/datetime-to-local-mtz.yml | 12 ++++++ 2 files changed, 45 insertions(+), 10 deletions(-) create mode 100644 prime-router/src/main/resources/metadata/fhir_transforms/common/datetime-to-local-mtz.yml diff --git a/prime-router/src/main/kotlin/fhirengine/translation/hl7/utils/CustomFHIRFunctions.kt b/prime-router/src/main/kotlin/fhirengine/translation/hl7/utils/CustomFHIRFunctions.kt index c6900d23a94..819df5d2def 100644 --- a/prime-router/src/main/kotlin/fhirengine/translation/hl7/utils/CustomFHIRFunctions.kt +++ b/prime-router/src/main/kotlin/fhirengine/translation/hl7/utils/CustomFHIRFunctions.kt @@ -3,6 +3,7 @@ package gov.cdc.prime.router.fhirengine.translation.hl7.utils import ca.uhn.fhir.model.api.TemporalPrecisionEnum import fhirengine.translation.hl7.utils.FhirPathFunctions import fhirengine.translation.hl7.utils.helpers.convertDateToAge +import gov.cdc.prime.router.common.DateUtilities import gov.cdc.prime.router.fhirengine.translation.hl7.SchemaException import org.hl7.fhir.r4.fhirpath.FHIRPathUtilityClasses.FunctionDetails import org.hl7.fhir.r4.model.Base @@ -445,11 +446,6 @@ object CustomFHIRFunctions : FhirPathFunctions { throw SchemaException("Must call changeTimezone on a single element") } - val inputDate = focus[0] as? BaseDateTimeType ?: throw SchemaException( - "Must call changeTimezone on a dateTime, instant, or date; " + - "was attempted on a ${focus[0].fhirType()}" - ) - if (parameters == null || parameters[0].size != 1) { throw SchemaException("Must pass a timezone as the parameter") } @@ -465,14 +461,41 @@ object CustomFHIRFunctions : FhirPathFunctions { ) } - return when (inputDate.precision) { - TemporalPrecisionEnum.YEAR, TemporalPrecisionEnum.MONTH, TemporalPrecisionEnum.DAY, null -> mutableListOf( - inputDate + return if (focus[0] is StringType) { + if (focus[0].toString().length <= 8) { // we don't want to convert Date-only strings + return mutableListOf(StringType(focus[0].toString())) + } + + // TODO: find a way to pass in these values from receiver settings + + val dateTimeFormat = null + val convertPositiveDateTimeOffsetToNegative = null + val useHighPrecisionHeaderDateTimeFormat = null + + val formattedDate = DateUtilities.formatDateForReceiver( + DateUtilities.parseDate((focus[0].toString())), + ZoneId.of(inputTimeZone), + dateTimeFormat ?: DateUtilities.DateTimeFormat.OFFSET, + convertPositiveDateTimeOffsetToNegative ?: false, + useHighPrecisionHeaderDateTimeFormat ?: false ) - TemporalPrecisionEnum.MINUTE, TemporalPrecisionEnum.SECOND, TemporalPrecisionEnum.MILLI -> mutableListOf( - DateTimeType(inputDate.value, inputDate.precision, timezonePassed) + mutableListOf( + StringType(formattedDate) ) + } else { + val inputDate = focus[0] as? BaseDateTimeType ?: throw SchemaException( + "Must call changeTimezone on a dateTime, instant, or date; " + + "was attempted on a ${focus[0].fhirType()}" + ) + + when (inputDate.precision) { + TemporalPrecisionEnum.YEAR, TemporalPrecisionEnum.MONTH, TemporalPrecisionEnum.DAY, null -> + mutableListOf(inputDate) + + TemporalPrecisionEnum.MINUTE, TemporalPrecisionEnum.SECOND, TemporalPrecisionEnum.MILLI -> + mutableListOf(DateTimeType(inputDate.value, inputDate.precision, timezonePassed)) + } } } } \ No newline at end of file diff --git a/prime-router/src/main/resources/metadata/fhir_transforms/common/datetime-to-local-mtz.yml b/prime-router/src/main/resources/metadata/fhir_transforms/common/datetime-to-local-mtz.yml new file mode 100644 index 00000000000..f87b4e3c7df --- /dev/null +++ b/prime-router/src/main/resources/metadata/fhir_transforms/common/datetime-to-local-mtz.yml @@ -0,0 +1,12 @@ +elements: + - name: hl7-datetime-to-local + resource: "Bundle.descendants().where(url='https://reportstream.cdc.gov/fhir/StructureDefinition/hl7v2-date-time')" + bundleProperty: "%resource.value[x]" + value: ["%resource.value.changeTimezone('America/Denver')"] + + + - name: message-date-time-to-local + resource: 'Bundle.entry.resource.ofType(MessageHeader).extension("https://reportstream.cdc.gov/fhir/StructureDefinition/msh-message-header").extension("MSH.7")' + condition: '%resource.value.exists()' + bundleProperty: '%resource.value[x]' + value: ["%resource.value.changeTimezone('America/Denver')"]