-
Notifications
You must be signed in to change notification settings - Fork 1
/
research.html
170 lines (143 loc) · 10.6 KB
/
research.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta content="width=device-width, initial-scale=1.0" name="viewport">
<meta content="" name="descriptison">
<meta content="" name="keywords">
<!-- Favicons -->
<link href="assets/favicon.ico" rel="icon">
<link href="assets/img/apple-touch-icon.png" rel="apple-touch-icon">
<title>Research | The Data Informatics Center for Epidemiology (DICE)</title>
<meta name="title" content="The Data Informatics Center for Epidemiology (DICE)">
<!-- <meta name="description"
content="Designing digital solutions which engage citizens in four core areas — logistics, health outcomes, user-centric impact, and communication."> -->
<meta property="og:image" content="assets/images/header.jpg">
<!-- Google Fonts -->
<link
href="https://fonts.googleapis.com/css?family=Open+Sans:300,300i,400,400i,700,700i|Raleway:300,400,500,700,800"
rel="stylesheet">
<!-- Vendor CSS Files -->
<link href="assets/vendor/bootstrap/css/bootstrap.min.css" rel="stylesheet">
<link href="assets/vendor/venobox/venobox.css" rel="stylesheet">
<link href="assets/vendor/font-awesome/css/font-awesome.min.css" rel="stylesheet">
<link href="assets/vendor/owl.carousel/assets/owl.carousel.min.css" rel="stylesheet">
<link href="assets/vendor/aos/aos.css" rel="stylesheet">
<!-- Template Main CSS File -->
<link href="assets/css/style.css" rel="stylesheet">
<!-- Flickity CSS File -->
<link href="https://unpkg.com/flickity@2/dist/flickity.min.css" rel="stylesheet">
<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-GF1FRVH53P"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());
gtag('config', 'G-GF1FRVH53P');
</script>
<!-- =======================================================
* Template Name: TheEvent - v2.2.0
* Template URL: https://bootstrapmade.com/theevent-conference-event-bootstrap-template/
* Author: BootstrapMade.com
* License: https://bootstrapmade.com/license/
======================================================== -->
</head>
<script>
function hideSnackbar() {
// Get the snackbar DIV
var x = document.getElementById("snackbar");
var link = document.getElementById("snackbar-link");
// Add the "show" class to DIV
x.className = "hide";
link.setAttribute("style", "visibility:hidden")
}
</script>
<body>
<!-- ======= Header ======= -->
<header id="header">
<div class="container">
<div id="logo" class="pull-left">
<!-- Uncomment below if you prefer to use a text logo -->
<h1><a href="./index.html">DICE</a></h1>
<!-- <a href="index.html" class="scrollto"><img src="assets/img/auto_id_tpt_new_america.png" alt="" title=""></a> -->
</div>
<nav id="nav-menu-container">
<ul class="nav-menu">
<li><a href="./index.html">Home</a></li>
<li><a class="active" href="./research.html">Research</a></li>
<li><a href="./people.html">People</a></li>
<li><a href="./news.html">News and Insights</a></li>
<li ><a href="./fellow.html">Computational Health Fellow</a></li>
<li><a href="./talks.html">Talks</a></li>
<li><a href="https://www.pathcheck.org/">PathCheck Foundation</a></li>
<!-- <li><a href="./index.html#leadership">Leadership</a></li> -->
<!-- <li><a href="./index.html#recent-work">Recent Work</a></li> -->
<!-- <li><a href="#about">About Us</a></li> -->
<li class="buy-tickets"><a href="https://tiny.cc/pathcheckslack">Get Involved</a></li>
</ul>
</nav><!-- #nav-menu-container -->
</div>
</header><!-- End Header -->
<section id="leadership" class="section-with-bg" style="margin-top: 70px;">
<div class="container">
<div class="section-header">
<h2 style="color: #191919">Research</h2>
</div>
<h4 id="vaccine-dashboard" style="text-align:left; color:#4d4d4d">Vaccine Dashboard</h3>
<p class="blue-underline">In partnership with the University of Alabama at Birmingham we have launched a dashboard displaying relevant information near-real time for vaccine distribution and administration in the USA and the world. This includes information on progress of vaccination rollouts as well as information on adverse events reported following vaccination. This dashboard is an ongoing project where the DICE data team works on leveraging available data to output predictive models that bring new insights into our progression towards herd immunity and the social impact of current strategies. <br> <br> View it live: <a href="https://vax.uab.edu">https://vax.uab.edu</a></p>
<h4 id="adverse-events" style="text-align:left; color:#4d4d4d">Adverse Events</h3>
<p class="blue-underline">In collaboration with data scientists and medical researchers from Pennsylvania State University, Mayo Clinic and the University of Texas MD Anderson Cancer Center, we have been working on analyzing reports on adverse events following vaccination. The Vaccine Adverse Events Reporting System (VAERS) is a post-licensure monitoring system that has been established to ensure the safety of vaccines. The VAERS collects and analyzes reports of adverse events that happen after vaccination. As part of our commitment to provide systems support for vaccine safety, we are conducting various data analytics studies on adverse events reported to the VAERS from December 15, 2020. The output of this ongoing research takes the form of a dashboard and research papers that improve our understanding of adverse events and leverage the generated insights to contribute to vaccine awareness efforts. A first paper has been submitted to JAMIA. </p>
<h4 id="deep-abm" style="text-align:left; color:#4d4d4d">Deep Agent Based Modeling (DeepABM)</h3>
<p class="blue-underline">The current sanitary crisis has come at great cost to our economies. Sacrifices have already been made in order to curb the spread and safe lives. As hard choices still remain ahead of us, it is paramount to have a comprehensive understanding of how public health interventions, economic incentives and strategic lockdowns impact can be optimized to allow for economic recovery. The dynamic of these interactions, taking place while the epidemiological dynamics of the virus spread run in the background, is poorly understood. In macroeconomics, agent-based models (ABM) have been successfully used to understand these types of interactions among agents and institutions. Recent studies incorporate the COVID-19 spread into economic studies with the goal of modelling these interactions and eventually serve as gym environments for intervention optimization analysis. One bottle-neck of such models is the computational constraints. Realistic models with a sizable number of agents and interactions are unrealistic from the computational standpoint. Together with a group from MIT, we have been working on a framework called deepABM that uses the notion of convolution in a graph neural network architecture to model interactions between agents. By construction, these interactions can be parallelized and existing frameworks like Pytorch Geometric can be leveraged to efficiently implement realistic ABM models. This project is currently exploring such one implementation. <br><br></p>
<div class="section-header">
<h2 style="color: #191919">Publications</h2>
</div>
<p class="blue-underline">Javier Álvarez, Carlos Baquero, Elisa Cabana, Jaya Prakash Champati, Antonio Fernández Anta, Davide Frey, Augusto García-Agúndez, Chryssis Georgiou, Mathieu Goessens, Harold Hernández, Rosa Lillo, Raquel Menezes, Raúl Moreno, Nicolas Nicolaou, Oluwasegun Ojo, Antonio Ortega, Jesús Rufino, Efstathios Stavrakis, Govind Jeevan, Christin Glorioso. “Estimating Active Cases of COVID-19”, Aug. 2021. <a href="http://arxiv.org/abs/2108.03284">[PAPER]</a></p>
<br>
<p class="blue-underline">Rajat Jain, Utkarsh Gupta, Sethuraman TV, Rohan Sukumaran, Christin Glorioso MD PhD. "Analysis of Tata-1mg data for Covid-19 second wave prediction in India", Aug. 2021. <a href="https://www.researchgate.net/publication/353739305_Analysis_of_Tata-1mg_data_for_Covid-19_second_wave_prediction_in_India?channel=doi&linkId=610d5f201e95fe241ab450b2&showFulltext=true">[PAPER]</p>
<br>
<p class="blue-underline">Raghav Awasthi, Aditya Nagori, Bouchra Nasri, "Global generalisability of AI-driven COVID-19 vaccination policies: a cross-sectional observational study", medRxiv 2023.01.31.23285300, Feb. 2023, <a href="https://doi.org/10.1101/2023.01.31.23285300">[PAPER]</a></p>
<p class="blue-underline"></p>
</div>
</section>
<style>
.blue-underline a {
color: blue;
text-decoration: underline;
}
</style>
<!-- ======= Footer ======= -->
<footer id="footer">
<div class="container">
<div class="copyright">
© Copyright <strong>The Data Informatics Center for Epidemiology (DICE)</strong>. All Rights Reserved.
</div>
<div class="credits">
<!--
All the links in the footer should remain intact.
You can delete the links only if you purchased the pro version.
Licensing information: https://bootstrapmade.com/license/
Purchase the pro version with working PHP/AJAX contact form: https://bootstrapmade.com/buy/?theme=TheEvent
-->
Based off <a href="https://bootstrapmade.com/"
style="text-decoration: underline; color:white">BootstrapMade</a>
</div>
</div>
</footer><!-- End Footer -->
<a href="#" class="back-to-top"><i class="fa fa-angle-up"></i></a>
<!-- Vendor JS Files -->
<script src="assets/vendor/jquery/jquery.min.js"></script>
<script src="assets/vendor/bootstrap/js/bootstrap.bundle.min.js"></script>
<script src="assets/vendor/jquery.easing/jquery.easing.min.js"></script>
<script src="assets/vendor/php-email-form/validate.js"></script>
<script src="assets/vendor/venobox/venobox.min.js"></script>
<script src="assets/vendor/owl.carousel/owl.carousel.min.js"></script>
<script src="assets/vendor/superfish/superfish.min.js"></script>
<script src="assets/vendor/hoverIntent/hoverIntent.js"></script>
<script src="assets/vendor/aos/aos.js"></script>
<!-- Template Main JS File -->
<script src="assets/js/main.js"></script>
<!-- Flickity JS File -->
<script src="https://unpkg.com/flickity@2/dist/flickity.pkgd.min.js"></script>
</body>
</html>