@@ -380,7 +380,7 @@ fn merge_into_base_map(
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}
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#[ pyfunction]
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- fn all_ ( bam_path : String , mapping_quality : usize , base_quality : usize ) -> PyResult < MapTide > {
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+ fn all ( bam_path : String , mapping_quality : usize , base_quality : usize ) -> PyResult < MapTide > {
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// Create initial maps
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let ( mut ref_arrs, mut ins_maps, mut ref_lengths) = init_maps ( ) ;
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@@ -451,7 +451,7 @@ fn all_(bam_path: String, mapping_quality: usize, base_quality: usize) -> PyResu
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}
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#[ pyfunction]
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- fn query_ (
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+ fn query (
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bam_path : String ,
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bai_path : Option < String > ,
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region : String ,
@@ -572,7 +572,7 @@ fn query_(
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}
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#[ pyfunction]
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- fn parse_region_ ( region : String ) -> PyResult < ( String , Option < usize > , Option < usize > ) > {
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+ fn parse_region ( region : String ) -> PyResult < ( String , Option < usize > , Option < usize > ) > {
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let region: Region = region
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. parse ( )
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. map_err ( |x : ParseError | PyException :: new_err ( x. to_string ( ) ) ) ?;
@@ -592,9 +592,9 @@ fn parse_region_(region: String) -> PyResult<(String, Option<usize>, Option<usiz
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/// A Python module implemented in Rust.
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#[ pymodule]
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fn maptide ( _py : Python , m : & PyModule ) -> PyResult < ( ) > {
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- m. add_function ( wrap_pyfunction ! ( all_ , m) ?) ?;
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- m. add_function ( wrap_pyfunction ! ( query_ , m) ?) ?;
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- m. add_function ( wrap_pyfunction ! ( parse_region_ , m) ?) ?;
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+ m. add_function ( wrap_pyfunction ! ( all , m) ?) ?;
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+ m. add_function ( wrap_pyfunction ! ( query , m) ?) ?;
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+ m. add_function ( wrap_pyfunction ! ( parse_region , m) ?) ?;
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Ok ( ( ) )
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}
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