update readme and add sequence

README.md

@@ -6,4 +6,130 @@
 
 
 
-Rawdata for tests are available here : https://zenodo.org/records/14046657
+
+
+Rawdata for tests are available here : https://zenodo.org/records/14046657
+
+
+
+
+---
+
+| **Documentation**         | **Paper**                   |
+|:------------------------- |:--------------------------- |
+| [![][docs-img]][docs-url] | [![][paper-img]][paper-url] |
+
+
+
+SEQ_BRUKER_a_MP2RAGE_CS_360.jl is a Julia package that implements a reconstruction for an accelerated MP2RAGE sequence for Bruker scanner (**PV360-3.5**). 
+The reconstruction is performed using MRIReco.jl 
+
+More information and examples are available in the article [![][paper-img]][paper-url] and in the  [![][docs-img]][docs-url]
+
+![](./docs/src/img/fig_explain.png)
+
+## How to give credit
+
+If you use this package please acknowledge us by citing : https://doi.org/10.1002/mrm.27438
+
+Additionally, if you use the sequence available in the MR sequence folder, please contact us to sign the sequence transfer agreement : [email protected]
+
+## Bruker sequence and protocol
+
+The sequence, implemented for **Bruker Paravision PV-360.3.5**, and the corresponding protocol for fully-sampled  is available in the folder  `MR sequence/PV-360.3.5`. Source code is available in this private directory : https://github.com/aTrotier/a_MP2RAGE_CS_360
+
+## Julia Installation
+
+To use the code, we recommend downloading Julia version 1.10 with `juliaup`.
+
+<details>
+<summary>Windows</summary>
+
+#### 1. Install juliaup
+```
+winget install julia -s msstore
+```
+#### 2. Add Julia 1.10.4
+```
+juliaup add 1.10.4
+```
+#### 3. Make 1.10.4 default
+```
+juliaup default 1.10.4
+```
+
+<!---#### Alternative
+Alternatively you can download [this installer](https://julialang-s3.julialang.org/bin/winnt/x64/1.7/julia-1.9.3-win64.exe).--->
+
+</details>
+
+
+<details>
+<summary>Mac</summary>
+
+#### 1. Install juliaup
+```
+curl -fsSL https://install.julialang.org | sh
+```
+You may need to run `source ~/.bashrc` or `source ~/.bash_profile` or `source ~/.zshrc` if `juliaup` is not found after installation.
+
+Alternatively, if `brew` is available on the system you can install juliaup with
+```
+brew install juliaup
+```
+#### 2. Add Julia 1.10.4
+```
+juliaup add 1.10.4
+```
+#### 3. Make 1.10.4 default
+```
+juliaup default 1.10.4
+```
+
+<!---#### Alternative
+Alternatively you can download [this installer](https://julialang-s3.julialang.org/bin/mac/x64/1.7/julia-1.9.3-mac64.dmg)--->
+
+</details>
+
+<details>
+<summary>Linux</summary>
+
+#### 1. Install juliaup
+
+```
+curl -fsSL https://install.julialang.org | sh
+```
+You may need to run `source ~/.bashrc` or `source ~/.bash_profile` or `source ~/.zshrc` if `juliaup` is not found after installation.
+
+Alternatively, use the AUR if you are on Arch Linux or `zypper` if you are on openSUSE Tumbleweed.
+#### 2. Add Julia 1.10.4
+```
+juliaup add 1.10.4
+```
+#### 3. Make 1.10.4 default
+```
+juliaup default 1.10.4
+```
+</details>
+
+## Package Installation
+
+You can install the package in any project with the following command :
+
+- launch julia with the command `julia`
+- enter the Julia package manager by typing `]` in the REPL. (the REPL should turn in blue)
+- if you want to activate an environment, type : `activate .` (otherwise the package will be installed in the global environment)
+- In order to add our unregistered package, type `add https://github.com/CRMSB/SEQ_BRUKER_A_MP2RAGE_CS_360`
+- if you want to use the package : `using SEQ_BRUKER_A_MP2RAGE_CS_360`
+
+## How to use the package
+
+
+## Version
+
+
+[docs-img]: https://img.shields.io/badge/docs-latest%20release-blue.svg
+[docs-url]: https://crmsb.github.io/SEQ_BRUKER_a_MP2RAGE_CS_360/dev/
+
+[paper-img]: https://img.shields.io/badge/doi-10.1002/mrm.27438-blue.svg
+[paper-url]: https://doi.org/10.1002/mrm.27438