From 0d2caacf57ac1e17b936d6740a0a7ede30d7cd60 Mon Sep 17 00:00:00 2001 From: cailigd Date: Sat, 25 Mar 2023 17:43:26 +0800 Subject: [PATCH] solve prepare_dataset_np issue --- MuRaL/preprocessing.py | 5 ----- 1 file changed, 5 deletions(-) diff --git a/MuRaL/preprocessing.py b/MuRaL/preprocessing.py index 9eb2b93..c00c813 100644 --- a/MuRaL/preprocessing.py +++ b/MuRaL/preprocessing.py @@ -827,13 +827,8 @@ def prepare_dataset_h5(bed_regions, ref_genome, bw_paths, bw_files, bw_names, bw return dataset -<<<<<<< HEAD def prepare_dataset_np(bed_regions, ref_genome, bw_files, bw_names, bw_radii, local_radius=5, local_order=1, distal_radius=50, distal_order=1, seq_only=False, without_bw_distal=False): - """Prepare the datasets for given regions, using H5 file""" -======= -def prepare_dataset_np(bed_regions, ref_genome, bw_files, bw_names, local_radius=5, local_order=1, distal_radius=50, distal_order=1,seq_only=False): """Prepare the datasets for given regions, without an H5 file""" ->>>>>>> cbfeba181f6a98649acb4b3170f206559c5bcb39 # Prepare local data data_local, seq_cols, categorical_features, output_feature = prepare_local_data(bed_regions, ref_genome, bw_files, bw_names, bw_radii, local_radius, local_order, seq_only)