Attribute Types
The Spacialist provides a big variety of different attribute types that can be used inside your Data Model. Named versions of those Attribute Types are used to populate the Entity Types.
In the next section we'll introduce all available attribute types, what they are used for and how the import data has to be formatted. Note the following special symbols that may be used in the formatting, which will not be typed and have only semantic meaning.
- ... - is a placeholder for various content
- [...] - Stand for optional syntax, the squared brackets should be ignored
- [... ⟳] - Stands for an expression that can be repeated indefinetly
Boolean
Used for single checkbox to represent the binary values trueand false.
Import Format
When importing only truthy values will be considered. When cells are empty those are considered as false.
The values that are considered true are:
xtortrueworwahr- numeric values > 0
Date
Represents a single date attribute, that is rendered with a default calender input field in the application.
Import Format
YYYY-MM-DD e.g. 2024-10-30
It only accepts dates in the format
Date Range
Represents a date range between two dates.
Import Format
YYYY-MM-DD;YYYY-MM-DD e.g. 2024-10-25;2024-10-30
The range must have a START and END date with the format YYY-MM-DDseparated by a semicolon. The start date must be earlier than the end date: START;END
Dimension
This attribute represents the extends of a three-dimensional object, with width, height, depth and an arbitraray unit (Note: that this is not powered by the SI-Unit system).
Import Format
W;H;D;UNIT e.g 2.5;51.2;210.3;cm
The values W,H and D must be numeric values. And the UNIT value may be any string. Those values need to be separated by a semicolon ;.
Double (Floating Point Number)
Represents a floating point number.
Import Format
N
Must be any valid floating point number representation using a . as a decimal separator. 234, -18, 2.3, 1.2e3 or 7E-10.
Dropdown Multiple
A dropdown that allows selelcting from a list of concepts from the thesaurus.
Import Format
CONCEPT_1;CONCEPT_2;CONCEPT_3;[...] e.g. Red;Green;Blue
A list of concepts that is separated with a semicolon ;. For more infos see Dropdown Single
Dropdown Single
A dropdown that is populated by thesaurus concepts and allows the selection of exactly one item.
Import Format
CONCEPT_NAME e.g. Red
The concept name must match excactly the concept that you want to import. The concept can be in any language.
Entity
A dropdown for selecting a single entity. Can be limited to a specific entity type.
Import Format
ENTITY_NAME
The entity name must match the entity (case-sensitive).
Entity Multiple
A dropdown for selecting multiple entites. Can be limited to a specific type.
Import Format
ENTITY_1;ENTITY_2
The entities to import. Must match the entity name (case-sensitive).
Epoch
Has two parts. A time span field and a thesaurus dropdown field to specify the epoch.
Import Format
START;END;EPOCH_CONCEPT e.g. -100;30;antiquity
A start year and a end year in the gregorian calendar as integer values. Optional can be an epoch thesaurus concept. If the year is a negative number, it refers to the time before christ.
Geography (WKT)
Adds a geographical attribute to the entity. Currently they cannot be linked on the main map. Each entity has a single field for geo referencing internally.
Import Format
WKT_STRING e.g. POINT(1 1)
Any valid WKT string, a good overview of these strings can be found on Wikipedia.
Iconclass
Can be used to collect data as Iconclass objects, as specified at https://iconclass.org/.
Import Format
ICONCLASS_STRING e.g. 22A311
Any iconclass string as defined at https://iconclass.org/.
Integer
Field for integer values
Import Format
INT_VAL e.g. 5
Can be any integer number x that is in the valid range of PHP_INT_MIN < x <PHP_INT_MAX.
List
Field for a list of text values.
Import Format
TEXT[;TEXT ⟳]
An arbitrary number of items separated by a semicolon.
Percentage
Field that allows
Import Format
X e.g. 33
X is an integer value in the form of: 0 <= X <= 100.
Richtext
This creates a textarea with formatted text, allowing various text decorations that are specified in the very simple Markdown Syntax.
Spacialist offers a convenient editor to edit these text with tools most know from Softwares like Word.
The unformatted Markdown text looks like this.
Import Format
X e.g.
# Heading
Some Text with **bold** or _italic_ or ~struck out~\\
X is a text string that may contain markdown syntax.
RISM
Id to a musical peace inside the RISM catalog.
Import Format
X e.g. 600146721
X needs to be a positive integer value.
Serial
The serial attribute counts all entities that have this attribute attached and displays a distinct index number for every one of them. To use the counter you must use the %dmarker during the creation of this attribute. This allows to create meaningful tags e.g. find_#%d which results in find_#5. The order of the enumeration is the time the entity was created. To ensure always nglyphs in the counter (e.g. #003) you may use the syntax %03d.
Warning
ThiA serial is not a persistent id, as it may change. When some entities are created at the same time or an entity type receives or loses this attribute, the enumeration will change!
Import Format
Caution
Serial values cannot be imported
Si Unit
A numeric input associated with a si unit. The si type (e.g. mass or temperature) is fixed when creating the attribute. The si 'prefix' (e.g. kg, g, t) can be changed by the user.
Import Format
VALUE;UNIT e.g. 80;kg
VALUE must be a numeric value. UNIT must be a supported unit.
Time Period
A span of two years (as integers).
Import Format
START;END e.g. -100;30
A start year and a end year in the gregorian calendar as integer values. If the year is a negative number, it refers to the time before christ. The start year must be before the end year.
Textbox
A textbox for short, unformatted texts.
Import Format
X e.g. This is a note
X is any string.
Textfield
A textarea for longer, unformatted texts.
Import Format
X e.g. This is a note
X is any string.
URL
A textfield that contains a link. The field can be clicked to visit that website in a new tab.
Import Format
X e.g. https://uni-tuebingen.de
X is any string.
UserList
A list of users.
Import Format
USER_1;USER_2 e.g. john;admin
USER must be an existing nickname of a user.
Bibliography
Spacialist provides basic utilities for managing literature inside the application. Allowing scientists to have a more meaningful discussion about their datapoints. This data is managed using BibTex, which is the most common standard for reference management.
Workflow
Users can use their prefered literature management software when collecting the data and then import those items into Spacialist using the BibTex export of said software.
Available Fields
Spacialist supports the standard fields of BibTex as defined in it's Standard.
Additionally we support the following fields:
- doi Digital Object Identifier - Unique id for references.
- issb Unique identifier for books. [available for: @book and @inbook]
- issn Unique identifier for papers or journals. [available for: @article]
Coding Style
General Coding Style
HTML
| name | usage |
|---|---|
| Attribute New Line | Every attribute a separate line (if only one exists it can be on the same line) |
| Initial Indent | ✅ |
Javascript
| name | usage |
|---|---|
| Initial Indent | ✅ |
PHP
| name | usage |
|---|---|
| Attribute New Line | Every attribute a separate line (if only one exists it can be on the same line) |
| Initial Indent | ✅ |
VueJS
| name | usage |
|---|---|
| API Style | Composition API without the 'script setup' code block. |
| Component Names | Pascal Case |
Laravel
| name | usage |
|---|---|
| Controllers | Slim Controllers -> Logic should be inside models Control only handles the Requests |
| Models | If we need additional functionality, it shoudl reside inside the model, not the controller, as it can be easily reused inside different controllers but still be in it's associated model. |
| Component Names | Pascal Case |
<script>
+ import {reactive} from vue
+ import MyComponent from "@/components/MyComponent"
+
+ export default {
+ components: { MyComponent },
+ setup(props){
+
+ const state = reactive({
+ active: false,
+ })
+
+
+ return {
+ state
+ }
+ }
+ }
+</script>
+Documentation
This documentation is based on VuePress, a vue-powered static site generator. Here you get a brief overview on how to contribute to the growth and the maintainance of this documentation. The underlying repository is located in GitHub.
Structure
There are only a few places of relevance for the average contributor: pages, assets and the config.
- Pages can be found directly in the /docs/* directories
- The important Config-File can be found in /docs/.vuepress/config.js
- Assets like images and videos reside inside the /docs/.vuepress/public/assets/ directory
Contributing
All pages are written in plain Markdown. If you want to change a file, just locate it inside the /docs/ directory and add the file accordingly. There are some additional Markdown functionalities available. For a more detailed description see the VuePress Documentation.
If you want to add a page, you also need to register that file inside the sidebar section of the config file. For it to show up in the navigation.
Final Notes
That's basically it. Thank you for contributing.
',10)]))}const c=t(a,[["render",i],["__file","docs.html.vue"]]),d=JSON.parse('{"path":"/developer/docs.html","title":"Documentation","lang":"en-US","frontmatter":{},"headers":[{"level":2,"title":"Structure","slug":"structure","link":"#structure","children":[]},{"level":2,"title":"Contributing","slug":"contributing","link":"#contributing","children":[]},{"level":2,"title":"Final Notes","slug":"final-notes","link":"#final-notes","children":[]}],"git":{"updatedTime":1728571681000,"contributors":[{"name":"Severino","email":"severin.opel@hotmail.com","commits":1}]},"filePathRelative":"developer/docs.md"}');export{c as comp,d as data}; diff --git a/assets/entity-single-dropdown-CTa-nHgU.png b/assets/entity-single-dropdown-CTa-nHgU.png new file mode 100644 index 0000000..e57ca1e Binary files /dev/null and b/assets/entity-single-dropdown-CTa-nHgU.png differ diff --git a/assets/entity-type.html-DZ-CeFJc.js b/assets/entity-type.html-DZ-CeFJc.js new file mode 100644 index 0000000..503431b --- /dev/null +++ b/assets/entity-type.html-DZ-CeFJc.js @@ -0,0 +1 @@ +import{_ as a,c as o,a as e,b as t,o as i}from"./app-CBjAMpej.js";const r={};function l(s,n){return i(),o("div",null,n[0]||(n[0]=[e("h1",{id:"entity-type",tabindex:"-1"},[e("a",{class:"header-anchor",href:"#entity-type"},[e("span",null,"Entity Type")])],-1),e("p",null,[t("An "),e("em",null,"Entity Type"),t(" is like the blueprint of one of your data objects. In the "),e("a",{href:"./data-model"},"Data Model Editor"),t(" you design multiple "),e("em",null,"Entity Types"),t(" to fit your projects needs. You should make sure to include all relevant "),e("a",{href:"./attribute"},"Attributes")],-1)]))}const u=a(r,[["render",l],["__file","entity-type.html.vue"]]),y=JSON.parse('{"path":"/user/entity-type.html","title":"Entity Type","lang":"en-US","frontmatter":{},"headers":[],"git":{"updatedTime":1727880785000,"contributors":[{"name":"Severino","email":"severin.opel@hotmail.com","commits":1}]},"filePathRelative":"user/entity-type.md"}');export{u as comp,y as data}; diff --git a/assets/entity_type.html-D7Csw2Jr.js b/assets/entity_type.html-D7Csw2Jr.js new file mode 100644 index 0000000..b1e6044 --- /dev/null +++ b/assets/entity_type.html-D7Csw2Jr.js @@ -0,0 +1 @@ +import{_ as t,c as n,d as a,o as i}from"./app-CBjAMpej.js";const s={};function r(o,e){return i(),n("div",null,e[0]||(e[0]=[a('Entity Type
Entity Types are the Blueprints of created Entities. They are a set of Attributes in a specific order.
Frontend Access
Entity Types can be created or modified inside the Data Model Editor.
Relation
Entity Type Relations describe how entities can be structured inside the entity tree. An Entity of type A can only be a subentity of Entity of type B if there is an Entity Type Relation that defines the Entity Type Relation as [parent: B, child: A].
Export Entity Types (Data Model)
Copies all entity types and their related data from the regular database (DEFAULT_DB) to a different database (TRANSFER_DB) based on a single entity of the DEFAULT_DB that needs to be specified using the --entity parameter.
The program will collect all data and requires a user confirmation before changing any data inside the transfer database. The data can be evaluated in the transfer.log that is located at storage/logs/transfer.log.
This will transfer
- Entity Types
- Entity Type Relations
- Attributes
- Entity Attribute Relations
- Thesaurus Concepts
- Thesaurus Concept Relations (broader/narrower)
- Thesaurus Labels (of the languages 'en' and 'de')
Example
php artisan app:export-types --entity=31
+Requirements
The TRANSFER_DB need to be defined inside the .env file:
DB_TRANSFER_CONNECTION=pgsql
+DB_TRANSFER_HOST=localhost
+DB_TRANSFER_PORT=5432
+DB_TRANSFER_DATABASE=transfer-db
+DB_TRANSFER_USERNAME=spacialist_user
+DB_TRANSFER_PASSWORD=spacialist_user
+Parameters
-e, --entity Define the entity that should be the basis for the data model export. That entity and all it's child entities will be scanned to collect all related information that will be transfered to the TRANSFER_DB.
Spatial Data
Import (Workaround)
Caution
This will likely change in the future and is more a workaround for the time being.
When you want to base your imported entities on spatial data, that should be included on the map, then you should follow these steps:
- Import your data file using the GeoData importer. This generates all required entities.
- Import the data again using the Data Importer and update the created entities.
Plugin
Plugins provide users and developers the ability to have a modular system of extending the functionality of the spacialist software without the need of having all functionality in one gigantic application.
Plugin Flow
Upload > Install > Activate >< Deactivate < Uninstall < Remove
Plugin Structure
- 📂 .vscode
- 📂 App*
- Main.php*
- 📂 build
- 📂 Migration
- 📂 routes
- 📂 storage
- 📂 src
- 📂 components
- App.vue
- main.js
- manifest.xml*
- package.json*
- index.html*
- README.md*
- CHANGELOG.md*
- vite.config.js*
* required
Plugin Permissions
Plugins can be hooked to a variety of locations of the Spacialist.
Backend
- Migrations
- Routes
- Models
- Storage
Frontend
- as Links
- SettingsDropdown
- as Components
- DetailsTab
- as Views
- Routes
Refresh Testing
Refreshes the database and optionally runs all tests.
Example
php artisan app:test
+Requirements
The application must have a .env.testing file setup.
Parameters
-r, --refresh Must be set to run a migration and the DemoSeeder on the database. (Does a config:clear to prevent running the migration on the main db).
-s, --skip Skips the testing process.
Testing Data
This should provide a quick and easy overview of the testing data to more easily formulate test cases. Listed are always the names of the items with their corresponding id in paranthesis. Be aware that this data may change in the future and may be outdated in the documentation. Check the links to quickly go to the master Database Seeders.
Users
Users are defined in the Admin User Seeder and the Demo User Seeder.
| id | name | nickname | password | roles | |
|---|---|---|---|---|---|
| 1 | Admin | admin | admin@localhost | admin | administrator |
| 2 | John Doe | johndoe | john.doe | password | admin. & guest |
| 3 | Gary Guest | garyguest | gary.guest@mail.com | password_gary | guest |
Entities
Entities as defined inside EntitiesTableSeeder
| id | name | type | parent entity |
|---|---|---|---|
| 1 | Site A | Site (3) | |
| 2 | Befund 1 | Feature (4) | Site A (1) |
| 3 | Inv. 1234 | Ceramic (5) | Befund 1 (2) |
| 4 | Inv. 124 | Ceramic (5) | Befund 1 (2) |
| 5 | Inv. 31 | Stone (6) | Befund 1 (2) |
| 6 | Aufschluss | Lagerstaette (7) | |
| 7 | Site B | Site (3) | Aufschluss (7) |
| 8 | Fund 12 | Ceramic (5) | Aufschluss (7) |
Entity Types
Entity types as defined inside EntityTypesTableSeeder.php and their according relations, that are defined inside EntityTypeRelationsTableSeeder.php.
| id | name | allowed children | can be top entity | allowed parents |
|---|---|---|---|---|
| 3 | Site | 3, 4, 5, 6, 7 | x | 5 |
| 4 | Feature | - | 3, 5, 6, 7 | |
| 5 | Ceramic | 3, 4, 5, 6, 7 | 3, 6, 7 | |
| 6 | Stone | 4, 5, 6, 7 | 3, 5, 7 | |
| 7 | Lagerstaette | 4, 5, 6, 7 | x | 3, 5, 6, 7 |
Entities by Type
Entities as defined inside EntitiesTableSeeder and their respective EntityTypes.
| Site | Feature | Ceramic | Stone | Lagerstaette |
|---|---|---|---|---|
| Site A (1) | Befund 1 (2) | Inv. 1234 (3) | Inv. 31 (5) | Aufschluss (6) |
| Site B (7) | Inv 124 (4) |
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Attribute Types
The Spacialist provides a big variety of different attribute types that can be used inside your Data Model. Named versions of those Attribute Types are used to populate the Entity Types.
In the next section we'll introduce all available attribute types, what they are used for and how the import data has to be formatted. Note the following special symbols that may be used in the formatting, which will not be typed and have only semantic meaning.
- ... - is a placeholder for various content
- [...] - Stand for optional syntax, the squared brackets should be ignored
- [... ⟳] - Stands for an expression that can be repeated indefinetly
Boolean
Used for single checkbox to represent the binary values trueand false.
Import Format
When importing only truthy values will be considered. When cells are empty those are considered as false.
The values that are considered true are:
xtortrueworwahr- numeric values > 0
Date
Represents a single date attribute, that is rendered with a default calender input field in the application.
Import Format
YYYY-MM-DD e.g. 2024-10-30
It only accepts dates in the format
Date Range
Represents a date range between two dates.
Import Format
YYYY-MM-DD;YYYY-MM-DD e.g. 2024-10-25;2024-10-30
The range must have a START and END date with the format YYY-MM-DDseparated by a semicolon. The start date must be earlier than the end date: START;END
Dimension
This attribute represents the extends of a three-dimensional object, with width, height, depth and an arbitraray unit (Note: that this is not powered by the SI-Unit system).
Import Format
W;H;D;UNIT e.g 2.5;51.2;210.3;cm
The values W,H and D must be numeric values. And the UNIT value may be any string. Those values need to be separated by a semicolon ;.
Double (Floating Point Number)
Represents a floating point number.
Import Format
N
Must be any valid floating point number representation using a . as a decimal separator. 234, -18, 2.3, 1.2e3 or 7E-10.
Dropdown Multiple
A dropdown that allows selelcting from a list of concepts from the thesaurus.
Import Format
CONCEPT_1;CONCEPT_2;CONCEPT_3;[...] e.g. Red;Green;Blue
A list of concepts that is separated with a semicolon ;. For more infos see Dropdown Single
Dropdown Single
A dropdown that is populated by thesaurus concepts and allows the selection of exactly one item.
Import Format
CONCEPT_NAME e.g. Red
The concept name must match excactly the concept that you want to import. The concept can be in any language.
Entity
A dropdown for selecting a single entity. Can be limited to a specific entity type.
Import Format
ENTITY_NAME
The entity name must match the entity (case-sensitive).
Entity Multiple
A dropdown for selecting multiple entites. Can be limited to a specific type.
Import Format
ENTITY_1;ENTITY_2
The entities to import. Must match the entity name (case-sensitive).
Epoch
Has two parts. A time span field and a thesaurus dropdown field to specify the epoch.
Import Format
START;END;EPOCH_CONCEPT e.g. -100;30;antiquity
A start year and a end year in the gregorian calendar as integer values. Optional can be an epoch thesaurus concept. If the year is a negative number, it refers to the time before christ.
Geography (WKT)
Adds a geographical attribute to the entity. Currently they cannot be linked on the main map. Each entity has a single field for geo referencing internally.
Import Format
WKT_STRING e.g. POINT(1 1)
Any valid WKT string, a good overview of these strings can be found on Wikipedia.
Iconclass
Can be used to collect data as Iconclass objects, as specified at https://iconclass.org/.
Import Format
ICONCLASS_STRING e.g. 22A311
Any iconclass string as defined at https://iconclass.org/.
Integer
Field for integer values
Import Format
INT_VAL e.g. 5
Can be any integer number x that is in the valid range of PHP_INT_MIN < x <PHP_INT_MAX.
List
Field for a list of text values.
Import Format
TEXT[;TEXT ⟳]
An arbitrary number of items separated by a semicolon.
Percentage
Field that allows
Import Format
X e.g. 33
X is an integer value in the form of: 0 <= X <= 100.
Richtext
This creates a textarea with formatted text, allowing various text decorations that are specified in the very simple Markdown Syntax.
Spacialist offers a convenient editor to edit these text with tools most know from Softwares like Word.
The unformatted Markdown text looks like this.
Import Format
X e.g.
# Heading
Some Text with **bold** or _italic_ or ~struck out~\
X is a text string that may contain markdown syntax.
RISM
Id to a musical peace inside the RISM catalog.
Import Format
X e.g. 600146721
X needs to be a positive integer value.
Serial
The serial attribute counts all entities that have this attribute attached and displays a distinct index number for every one of them. To use the counter you must use the %dmarker during the creation of this attribute. This allows to create meaningful tags e.g. find_#%d which results in find_#5. The order of the enumeration is the time the entity was created. To ensure always nglyphs in the counter (e.g. #003) you may use the syntax %03d.
Warning
ThiA serial is not a persistent id, as it may change. When some entities are created at the same time or an entity type receives or loses this attribute, the enumeration will change!
Import Format
Caution
Serial values cannot be imported
Si Unit
A numeric input associated with a si unit. The si type (e.g. mass or temperature) is fixed when creating the attribute. The si 'prefix' (e.g. kg, g, t) can be changed by the user.
Import Format
VALUE;UNIT e.g. 80;kg
VALUE must be a numeric value. UNIT must be a supported unit.
Time Period
A span of two years (as integers).
Import Format
START;END e.g. -100;30
A start year and a end year in the gregorian calendar as integer values. If the year is a negative number, it refers to the time before christ. The start year must be before the end year.
Textbox
A textbox for short, unformatted texts.
Import Format
X e.g. This is a note
X is any string.
Textfield
A textarea for longer, unformatted texts.
Import Format
X e.g. This is a note
X is any string.
URL
A textfield that contains a link. The field can be clicked to visit that website in a new tab.
Import Format
X e.g. https://uni-tuebingen.de
X is any string.
UserList
A list of users.
Import Format
USER_1;USER_2 e.g. john;admin
USER must be an existing nickname of a user.
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Overview
Spacialist is a versatile, highly customizable, user-friendly database management solution for the sciences and the digital humanities in peticular. The application has a wide variety of features.
Web-based Software
The client can be accessed on any computer using a standard browser.
Customizable Data Model
Highly flexible project-specific data models with a wide range of attribute types.
Thesaurus
Multilingual and centrally controlled vocabulary for compliant with the SKOS standard.
Bibliography
Basic bibliography management, allowing BibTex import and export.
User & Role Management
Manages user accounts and assign them specific roles with fully customizable rights and permissions.
Collaboration
Working on the same dataset as a team, managing certainty, literature and commenting on the data directly.
Plugins
Application is extensible through a plugin system. Adding existing functionality or writing custom plugins.
Files
The file plugin enables a file system, where files can be linked to single entities.
Map
The map plugin provides a light-weight GIS interface to visualize the data on maps.
Analysis
User-Interface to run elaborate queries without the need to write SQL.
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