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.gitignore
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.ipynb_checkpoints
jgh/
Results/BAM/
SRA_data/GrostS001385/SRR2989854_1_paired.fq.gz
SRA_data/GrostS001385/SRR2989854_2_paired.fq.gz
SRA_data/Minc557R/SRR4242467_2_paired.fq.gz
SRA_data/Minc557R/SRR4242467_1_paired.fq.gz
SRA_data/RreniMP/SRR2029861_1_paired.fq.gz
SRA_data/RreniMP/SRR2029861_2_paired.fq.gz
SRA_data/MincVW6/SRR4242464_SRR4242463_1_paired.fq.gz
SRA_data/MincVW6/SRR4242464_SRR4242463_2_paired.fq.gz
SRA_data/MincA14/SRR4242456_2_paired.fq.gz
SRA_data/MincA14/SRR4242456_1_paired.fq.gz
SRA_data/MincW1/SRR4242461_SRR4242460_1_paired.fq.gz
SRA_data/MincW1/SRR4242461_SRR4242460_2_paired.fq.gz
SRA_data/MincL19/SRR4242479_1_paired.fq.gz
SRA_data/MincL19/SRR4242479_2_paired.fq.gz
SRA_data/RreniWGA/SRR2032116_2_paired.fq.gz
SRA_data/RreniWGA/SRR2032116_1_paired.fq.gz
SRA_data/Ananu/SRR7511511_1_paired.fq.gz
SRA_data/Ananu/SRR7511511_2_paired.fq.gz
SRA_data/GrostSC/ERR123958_2_paired.fq.gz
SRA_data/GrostSC/ERR123958_1_paired.fq.gz
SRA_data/HbactGebreg2a1223/SRR6846592_1_paired.fq.gz
SRA_data/HbactGebreg2a1223/SRR6846592_2_paired.fq.gz
SRA_data/MincL27/SRR4242470_1_paired.fq.gz
SRA_data/MincL27/SRR4242470_2_paired.fq.gz
SRA_data/GrostS00138A/SRR2989857_1_paired.fq.gz
SRA_data/GrostS00138A/SRR2989857_2_paired.fq.gz
SRA_data/MincL9/SRR4242469_1_paired.fq.gz
SRA_data/MincL9/SRR4242469_2_paired.fq.gz
SRA_data/GrostS00138D/SRR2989858_1_paired.fq.gz
SRA_data/GrostS00138D/SRR2989858_2_paired.fq.gz
SRA_data/MincHarC/SRR4242466_SRR4242465_2_paired.fq.gz
SRA_data/MincHarC/SRR4242466_SRR4242465_1_paired.fq.gz