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DESCRIPTION
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DESCRIPTION
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Package: MiMIR
Title: Metabolomics-Based Models for Imputing Risk
Version: 1.4
Authors@R:
c(person(given = "Daniele",
family = "Bizzarri",
role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-6881-273X")),
person(given = "Marcel",
family = "Reinders",
role = c("aut","ths"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-1148-1562")),
person(given = "Marian",
family = "Beekman",
role = c("aut"),
email = "[email protected]",
comment = c(ORCID = "0000-0003-0585-6206")),
person(given = "Pieternella Eline",
family = "Slagboom",
role = c("aut","ths"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-2875-4723")),
person(given = "Erik",
family = "van den Akker",
role = c("aut","ths"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-7693-0728")))
Description: Provides an intuitive framework for ad-hoc statistical analysis of 1H-NMR metabolomics by Nightingale Health. It allows to easily explore new metabolomics measurements assayed by Nightingale Health, comparing the distributions with a large Consortium (BBMRI-nl); project previously published metabolic scores [<doi:10.1016/j.ebiom.2021.103764>, <doi:10.1161/CIRCGEN.119.002610>, <doi:10.1038/s41467-019-11311-9>, <doi:10.7554/eLife.63033>, <doi:10.1161/CIRCULATIONAHA.114.013116>, <doi:10.1007/s00125-019-05001-w>]; and calibrate the metabolic surrogate values to a desired dataset.
License: GPL-3
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.2
Depends:
R (>= 4.1.0)
Imports:
caret,
DT,
foreach,
ggplot2,
heatmaply,
matrixStats,
plotly,
pROC,
purrr,
shiny,
shinycssloaders,
shinyFiles,
shinydashboard,
shinyjs,
shinyWidgets,
stats,
survival,
survminer,
dplyr,
fs
LazyData: true
Suggests:
testthat (>= 3.0.0),
ggfortify,
knitr,
rmarkdown
Config/testthat/edition: 3