popvcf/.github/workflows/ci_linux.yaml at master · DecodeGenetics/popvcf · GitHub

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name: CI on Linux

on:
  # Trigger workflow on pull requests of any branch
  pull_request:
  # Trigger workflow on pushes to following branches
  push:
    branches:
      - master
      - dev

env:
  TZ: Atlantic/Reykjavik

defaults:
  run:
    shell: bash -ex {0}

jobs:
  build:
    name: ${{ matrix.name }}
    runs-on: ubuntu-18.04
    timeout-minutes: 120
    strategy:
      fail-fast: false
      matrix:
        include:
          - name: "GCC8 Release"
            pkg: "g++-8"
            cxx: "g++-8"
            cc: "gcc-8"
            build_type: Release

          - name: "GCC9 Debug"
            pkg: "g++-9"
            cxx: "g++-9"
            cc: "gcc-9"
            build_type: Debug

          - name: "GCC10 Debug C++20"
            pkg: "g++-10"
            cxx: "g++-10"
            cc: "gcc-10"
            cxx_flags: "-std=c++20"
            build_type: Debug

          - name: "GCC11 Release C++20"
            pkg: "g++-11"
            cxx: "g++-11"
            cc: "gcc-11"
            cxx_flags: "-std=c++20"
            build_type: Release

          - name: "Clang10 Debug C++20"
            pkg: "clang-10"
            cxx: "clang++-10"
            cc: "clang-10"
            cxx_flags: "-std=c++20"
            build_type: Debug

          - name: "Clang12 Release C++20"
            pkg: "clang-12"
            cxx: "clang++-12"
            cc: "clang-12"
            cxx_flags: "-std=c++20"
            build_type: Release
    steps:
      - name: Checkout
        uses: actions/checkout@v2
        with:
          path: src
          fetch-depth: 2
          submodules: recursive

      - name: Add package source
        run: |
          echo 'APT::Acquire::Retries "5";' | sudo tee -a /etc/apt/apt.conf.d/80-retries > /dev/null
          sudo add-apt-repository --no-update --yes ppa:ubuntu-toolchain-r/ppa
          sudo add-apt-repository --no-update --yes ppa:ubuntu-toolchain-r/test
          wget -O - https://apt.llvm.org/llvm-snapshot.gpg.key | sudo apt-key add -
          sudo add-apt-repository --no-update --yes "deb http://apt.llvm.org/bionic/ llvm-toolchain-bionic main"
          sudo add-apt-repository --no-update --yes "deb http://apt.llvm.org/bionic/ llvm-toolchain-bionic-11 main"
          sudo add-apt-repository --no-update --yes "deb http://apt.llvm.org/bionic/ llvm-toolchain-bionic-12 main"
          sudo apt-get update

      - name: Install Build dependencies
        run: sudo apt-get install --yes cmake ccache

      - name: Install compiler ${{ matrix.name }}
        run: sudo apt-get install --yes ${{ matrix.pkg }}

      - name: Install zstd
        run: sudo apt-get install --yes zstd libzstd-dev

      - name: Load ccache
        uses: actions/cache@v2
        with:
          path: .ccache
          key: ${{ runner.os }}-${{ matrix.name }}-ccache-${{ github.ref }}-${{ github.run_number }}
          # Restoring: From current branch, otherwise from base branch, otherwise from any branch.
          restore-keys: |
            ${{ runner.os }}-${{ matrix.name }}-ccache-${{ github.ref }}
            ${{ runner.os }}-${{ matrix.name }}-ccache-${{ github.base_ref }}
            ${{ runner.os }}-${{ matrix.name }}-ccache-

      - name: Tool versions
        run: |
          env cmake --version
          env ${{ matrix.cxx }} --version

      - name: Configure tests
        env:
          CXX: ${{ matrix.cxx }}
          CC: ${{ matrix.cc }}
        run: |
          mkdir build
          cd build
          cmake ../src -DCMAKE_BUILD_TYPE=${{ matrix.build_type }} -DCMAKE_CXX_FLAGS="${{ matrix.cxx_flags }}"

      - name: Build tests
        env:
          CCACHE_BASEDIR: ${{ github.workspace }}
          CCACHE_DIR: ${{ github.workspace }}/.ccache
          CCACHE_COMPRESS: true
          CCACHE_COMPRESSLEVEL: 6
          CCACHE_MAXSIZE: 500M
        run: |
          ccache -p || true
          cd build
          make -k -j2
          ccache -s || true

      - name: Run tests
        run: |
          cd build
          make test