dev_build_test.yml

name: HTTomo dev build

on:
  push:
    branches:
      - dev
  pull_request:
    branches:
      - dev
  
jobs:

  install-httomo-dev-test-iris:
    runs-on: iris-gpu
    container:
      image: nvidia/cuda:11.6.2-devel-ubi8
      env:
        NVIDIA_VISIBLE_DEVICES: ${{ env.NVIDIA_VISIBLE_DEVICES }}

    defaults:
      run:
        shell: bash -l {0}

    steps:
      - name: Checkout repository code
        uses: actions/checkout@v3

      - name: Create conda environment
        uses: mamba-org/setup-micromamba@v1
        with:
          environment-file: conda/environment.yml
          environment-name: httomo
          post-cleanup: 'all'
          init-shell: bash

      # - name: Install httomo-dev from conda-cloud
      #   run: |
      #     micromamba activate httomo
      #     micromamba install "httomo/label/dev/linux-64::httomo * py310_openmpi_regular*" -c httomo -c conda-forge -c astra-toolbox -c rapidsai -y
      #     micromamba list

      - name: Install httomo-dev
        run: |
          micromamba activate httomo
          pip install .[dev]
          micromamba list
                
      - name: Generate yaml templates
        run: |
          python ./scripts/yaml_templates_generator.py -i ./httomo/methods_database/packages/httomo_modules.yaml -o ./httomo/yaml_templates/httomo
          python ./scripts/yaml_templates_generator.py -i ./httomo/methods_database/packages/external/tomopy/tomopy_modules.yaml -o ./httomo/yaml_templates/tomopy
          python ./scripts/yaml_unsupported_tomopy_remove.py -t ./httomo/yaml_templates/tomopy -l ./httomo/methods_database/packages/external/tomopy/tomopy.yaml
          python ./scripts/yaml_templates_generator.py -i ./httomo/methods_database/packages/external/httomolib/httomolib_modules.yaml -o ./httomo/yaml_templates/httomolib
          python ./scripts/yaml_templates_generator.py -i ./httomo/methods_database/packages/external/httomolibgpu/httomolibgpu_modules.yaml -o ./httomo/yaml_templates/httomolibgpu

      - name: Run tests
        run: |
          pytest tests/