From 871ad793c707c4ef98e9c92f08b58dd2098e2bf8 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?=E2=80=98ens-ftricomi=E2=80=99?= <ftricomi@ebi.ac.uk>
Date: Thu, 15 Aug 2024 18:05:52 +0100
Subject: [PATCH] added storeDir

---
 .../nextflow/modules/star_alignment/download_paired_fastqs.nf   | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pipelines/nextflow/modules/star_alignment/download_paired_fastqs.nf b/pipelines/nextflow/modules/star_alignment/download_paired_fastqs.nf
index eb608df..1885eb3 100644
--- a/pipelines/nextflow/modules/star_alignment/download_paired_fastqs.nf
+++ b/pipelines/nextflow/modules/star_alignment/download_paired_fastqs.nf
@@ -26,7 +26,7 @@ process DOWNLOAD_PAIRED_FASTQS {
     label "default"
     tag "${taxon_id}:${run_accession}"
     maxForks 25
-    //storeDir "${params.outDir}/$taxon_id/$run_accession"
+    storeDir "${params.outDir}/$taxon_id/$run_accession"
     afterScript "sleep $params.files_latency"  // Needed because of file system latency
     
     input: