From 5bf80d5a777cc46d439f7fcb0df65253056c5627 Mon Sep 17 00:00:00 2001
From: ens-ftricomi <ftricomi@ebi.ac.uk>
Date: Fri, 12 Apr 2024 17:46:27 +0100
Subject: [PATCH] removed double quotes

---
 pipelines/nextflow/modules/omark/omark_output.nf | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pipelines/nextflow/modules/omark/omark_output.nf b/pipelines/nextflow/modules/omark/omark_output.nf
index c83d647..b6f6489 100644
--- a/pipelines/nextflow/modules/omark/omark_output.nf
+++ b/pipelines/nextflow/modules/omark/omark_output.nf
@@ -30,10 +30,10 @@ process OMARK_OUTPUT {
     path("*_proteins_detailed_summary.txt"), emit:summary_file
 
     script:
-    """
+    
     def summary_name = summary_file
     def species = db.species.toLowerCase()
     def gca = db.gca.toLowerCase().replaceAll(/\./, "v").replaceAll(/_/, "")
     summary_name = [species, gca, "omark", "proteins_detailed_summary.txt"].join("_")
-    """
+    
 }