.travis.yml

dist: xenial

language: "perl"

sudo: false

cache:
  apt: false
  directories:
    - $HOME/perl5/perlbrew
    - $HOME/dependencies

perl:
  - "5.26"
  - "5.30"

env:
  matrix:
  - COVERALLS=true  DB=mysql
  - COVERALLS=false DB=mysql
  - COVERALLS=false DB=sqlite

addons:
  apt:
    packages:
      - unzip
      - apache2
      - libpng-dev
      - libssl-dev
      - openssl

services:
  - mysql

before_install:
    - export ENSEMBL_BRANCH='main'
    - export ENSEMBL_VER=$(echo $TRAVIS_BRANCH | grep -P -o '(?<=version[\W_]|fix[\W_]|release[\W_])(\d+)')
    - if [[ $ENSEMBL_VER =~ [0-9]+ ]]; then ENSEMBL_BRANCH="release/$ENSEMBL_VER"; fi
    - git clone --branch $ENSEMBL_BRANCH --depth 1 https://github.com/Ensembl/ensembl-test.git
    - git clone --branch $ENSEMBL_BRANCH --depth 1 https://github.com/Ensembl/ensembl.git
    - git clone --branch $ENSEMBL_BRANCH --depth 1 https://github.com/Ensembl/ensembl-variation.git
    - export CWD=$PWD
    - export DEPS=$HOME/dependencies
    - mkdir -p $DEPS
    - cd $DEPS
    - $CWD/travisci/get_dependencies.sh
    - cd $CWD

install:
    - export CWD=$PWD
    - export DEPS=$HOME/dependencies
    - export KENT_SRC="$DEPS/kent-335_base/src"
    - export HTSLIB_DIR=$DEPS/htslib
    - export MACHTYPE=$(uname -m)
    - export CFLAGS="-fPIC"
    - export PERL5LIB=$DEPS/bioperl-live-release-1-6-924:$PERL5LIB
    - cd $DEPS
    - $CWD/travisci/build_c.sh
    - cd $CWD
    - cpanm -v --installdeps --with-recommends --notest --cpanfile ensembl/cpanfile .
    - cpanm -v --installdeps --notest .
    - cpanm -n Devel::Cover::Report::Coveralls
    - cpanm -n Bio::DB::HTS DBD::SQLite JSON URI::Escape
    - mysql -u root -h localhost -e 'GRANT ALL PRIVILEGES ON *.* TO "travis"@"%"'
    - cp travisci/MultiTestDB.conf.travisci.mysql  modules/t/MultiTestDB.conf.mysql
    - cp travisci/MultiTestDB.conf.travisci.SQLite modules/t/MultiTestDB.conf.SQLite

script: "./travisci/harness.sh"

# Get the matrix to only build coveralls support when on 5.26
jobs:
  exclude:
    - perl: "5.30"
      env: COVERALLS=true DB=mysql
    - perl: "5.26"
      env: COVERALLS=false DB=mysql

notifications:
  slack:
    rooms:
      secure: bNSqBwR+6GpKqW22MuBbdAH9Pb25hbX8UOW3MVd9HI7CnQBOfifXR47AMClFgfV5ZcHHRnOtOqin8RYccmrTJOxAAa6IilFJ/z5XAjVIMLQAORut+fVYnwOmQuvedWR8GdXq/awgVLeNG/ROIwl1gyFirTWYV5ygwM4McvD8y5A=
    on_failure: change