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{
"10.64898/2026.07.10.26357749": {
"title": "Artificial intelligence-based ECG reconstruction error as a continuous predictor of all-cause mortality: a multi-cohort retrospective validation study",
"journal": "medRxiv",
"year": "2026",
"abstract": "**Background**<br>Recent artificial intelligence (AI) models applied to the electrocardiogram (ECG) for risk stratification typically rely on supervised learning, defining risk as the error relative to an external target such as age or sex. This couples the risk score to the choice of target rather than the cardiac signal alone, and may limit generalisability. We aimed to develop a self-supervised AI-ECG risk score based on the error in reconstructing a partially masked ECG. <br>**Methods**<br>A transformer-based masked autoencoder was trained on 85% of the CODE dataset (n = 7,212,109 ECGs) to reconstruct ECG signals from partially masked inputs. The association between reconstruction error and all-cause mortality was assessed internally in CODE-15% and externally validated in four independent cohorts: MIMIC-IV-ECG (critical care, US), HEEDB (hospital, US), CHRIS (population-based, Italy), and Innsbruck (cardiology centre, Austria). A binary risk score (>1 SD above the CODE-15% mean) was additionally evaluated in these cohorts and in the UK Biobank (population-based, UK). <br>**Findings**<br>In Cox proportional hazards models adjusted for age and sex, each 1-SD increase in reconstruction error was associated with higher all-cause mortality (all *p* < 0.001; cohort median follow-up 1.4-11.0 years): CODE-15% (HR 1.39, 95% CI 1.37-1.42), MIMIC-IV-ECG (HR 1.39, 95% CI 1.37-1.40), HEEDB (HR 1.41, 95% CI 1.40-1.41), Innsbruck (HR 1.23, 95% CI 1.21-1.26), and CHRIS (HR 1.25, 95% CI 1.14-1.38). The binary threshold identified a high-risk group with increased mortality in all six cohorts, including the UK Biobank (HR 1.27, 95% CI 1.08-1.50, p=0.004).<br>**Interpretation**<br>Reconstruction error is a generalisable predictor of all-cause mortality across diverse clinical and population-based settings. Unlike supervised approaches, it reflects the model's uncertainty about the ECG signal itself rather than error relative to an external target, providing a direct measure of how much each recording deviates from normal cardiac electrical patterns.",
"authors": [
"Nicolson A",
"Pr\u00f6ll S",
"Lunelli R",
"Blankenburg H",
"Pramstaller P",
"Fuchsberger C",
"Bauer A",
"Dlaska C"
],
"doi": "10.64898/2026.07.10.26357749",
"source_study": [
"CHRIS baseline"
],
"ar": "570",
"volume": "",
"issue": "",
"pages": "",
"pre": true,
"pdate": "2026-07-10"
},
"10.1007/s00394-026-03992-y": {
"title": "Associations between dietary patterns and cardiovascular, kidney and metabolic risk markers in the Cooperative Health Research in South Tyrol study.",
"journal": "European journal of nutrition",
"year": "2026",
"abstract": "**Purpose**<br> Cardiovascular-kidney metabolic syndrome (CKM) represents an increasingly prevalent public health concern. Optimal strategies to prevent CKM-related outcomes are greatly needed. We assessed the association between various dietary patterns and CKM biomarkers in a general population study. <br>**Methods**<br> We used cross-sectional data from 8066 adult participants of the Cooperative Health Research in South Tyrol (CHRIS) study. Self-reported dietary intake was assessed through the semi-quantitative GA<sup>2</sup>LEN Food Frequency questionnaire. We derived six established dietary pattern indices, and population-specific dietary patterns through principal component analysis. CKM biomarkers included: systolic and diastolic blood pressure, glycated haemoglobin, visceral fat, HDL, LDL and total cholesterol, triglycerides, creatinine-based estimated glomerular filtration rate, and urinary albumin-to-creatinine ratio. We investigated associations between each dietary index and CKM risk marker using multivariable linear regression models. We further examined potential effect modification by sex, body mass index, physical activity and smoking habit. <br>**Results**<br> Higher adherence to healthy dietary patterns rich in fruits, vegetables, whole grains, and low in saturated fats was associated with more favorable CKM marker levels. E.g, when comparing the fourth to the first quartile the healthy plant-based dietary index was associated with lower total and LDL cholesterol (\u03b2\u00a0\u2248\u00a0-\u00a0\u20095.0\u00a0mg/dL, *p*\u00a0<\u00a0\u20090.001), lower blood pressure (\u03b2=\u00a0-\u00a01.24 mmHg, *p*\u2009=\u20090.001) and higher eGFR (\u03b2\u2009=\u20091.24\u00a0ml/min/1.73m<sup>2</sup>, *p*\u2009=\u20090.001). In contrast, the unhealthy plant based and a Western style diet were associated with higher SBP (\u03b2\u00a0\u2009=\u00a0\u20091.23-1.89\u00a0mmHg, *p*\u00a0<\u00a00.01), amongst others. For some markers, associations tended to be stronger in men, individuals with overweight or obesity, those with lower physical activity, and smokers (*P<sub>interaction</sub>*<\u00a00.05). <br>**Conclusions**<br> Adhering to a healthy plant rich diet low in saturated fats, added sugars and processed foods was associated with more favorable levels of CKM biomarkers, including blood lipids, blood pressure, glycated hemoglobin and eGFR.",
"authors": [
"Hantikainen E",
"Berger S",
"Barbieri G",
"Pramstaller PP",
"Garcia-Larsen V",
"G\u00f6gele M",
"Pattaro C",
"Lundin R",
"Domingues FS"
],
"doi": "10.1007/s00394-026-03992-y",
"source_study": [
"CHRIS baseline"
],
"ar": "537",
"volume": "65",
"issue": "4",
"pages": "",
"pre": false,
"pdate": "2026-05-29"
},
"10.64898/2025.12.01.25341334": {
"title": "Molecular characterization of liver steatosis through circulating proteins, metabolites and lipids",
"journal": "medRxiv",
"year": "2025",
"abstract": "**Background**<br> Metabolic dysfunction-associated steatotic liver disease (MASLD) is among the most prevalent liver disorders in Western countries. While steatosis is prevalent, molecular mechanisms associated with steatosis grades and how nutrition modulates related metabolic disturbances remain poorly understood. <br>**Methods**<br> We analyzed data from 327 participants of the CHRIS NAFLD study with Type 2 diabetes (T2D) and matched controls, integrating 148 plasma proteins with 175 serum metabolites and lipids to identify circulating biomarkers associated with hepatic steatosis severity. Associations between dietary intake and steatosis were investigated, and a potential influence of diet on the identified biomarkers was evaluated through a sensitivity analysis. Participants were stratified by steatosis grade based on ultrasound-derived measurements. <br>**Results**<br> Steatosis grade was strongly positively correlated with BMI and T2D. Several proteins (e.g., GC, AFM, AZGP1, SERPINC1, VTN, LRG1) and metabolites (e.g., glutamate, tyrosine, valine, lysoPCs) were associated with the highest steatosis grade, mainly reflecting a broader metabolically unhealthy phenotype. Adherence to a plant-based diet was associated with lower steatosis grades independent of circulating proteins, metabolites, and lipids. <br>**Conclusion**<br> Results suggest that circulating metabolic signatures of steatosis reflect broader metabolic dysregulation and are independent of dietary intake. These data support the use of blood-based multi-omics profiling to distinguish between metabolically healthy and unhealthy individuals, and may thus improve MASLD risk stratification.",
"authors": [
"De Graeve M",
"Hantikainen E",
"Louail P",
"Verri Hernandes V",
"Pattaro C",
"Domingues FS",
"Pramstaller PP",
"Tilg H",
"Ralser M",
"Grander C",
"Rainer J"
],
"doi": "10.64898/2025.12.01.25341334",
"source_study": [
"CHRIS NAFLD"
],
"ar": "534",
"volume": "",
"issue": "",
"pages": "",
"pre": true,
"pdate": "2025-12-01"
},
"10.1016/j.celrep.2023.113611": {
"title": "Genetic determinants of complement activation in the general population.",
"journal": "Cell reports",
"year": "2024",
"abstract": "Complement is a fundamental innate immune response component. Its alterations are associated with severe systemic diseases. To illuminate the complement's genetic underpinnings, we conduct genome-wide association studies of the functional activity of the classical (CP), lectin (LP), and alternative (AP) complement pathways in the Cooperative Health Research in South Tyrol study (n\u00a0= 4,990). We identify seven loci, encompassing 13 independent, pathway-specific variants located in or near complement genes (*CFHR4*, *C7*, *C2*, *MBL2*) and non-complement genes (*PDE3A*, *TNXB*, *ABO*), explaining up to 74% of complement pathways' genetic heritability and implicating long-range haplotypes associated with LP at *MBL2*. Two-sample Mendelian randomization analyses, supported by transcriptome- and proteome-wide colocalization, confirm known causal pathways, establish within-complement feedback loops, and implicate causality of ABO on LP and of CFHR2 and C7 on AP. LP causally influences collectin-11 and KAAG1 levels and the risk of mouth ulcers. These results build a comprehensive resource to investigate the role of complement in human health.",
"authors": [
"Noce D",
"Foco L",
"Orth-H\u00f6ller D",
"K\u00f6nig E",
"Barbieri G",
"Pietzner M",
"Ghasemi-Semeskandeh D",
"Coassin S",
"Fuchsberger C",
"G\u00f6gele M",
"Del Greco M F",
"De Grandi A",
"Summerer M",
"Wheeler E",
"Langenberg C",
"Lass-Fl\u00f6rl C",
"Pramstaller PP",
"Kronenberg F",
"W\u00fcrzner R",
"Pattaro C"
],
"doi": "10.1016/j.celrep.2023.113611",
"source_study": [
"CHRIS baseline"
],
"ar": "346",
"volume": "43",
"issue": "1",
"pages": "113611",
"pre": false,
"pdate": "2024-01-02"
},
"10.1038/s41467-025-61330-y": {
"title": "Genome-wide association meta-analysis of human olfactory identification discovers sex-specific and sex-differential genetic variants.",
"journal": "Nature communications",
"year": "2025",
"abstract": "Smelling is a human sense, expressing strong sexual dimorphisms. We aim to improve the knowledge of the genetics of human olfactory perception by performing an exploratory genome-wide association meta-analysis of up to 21,495 individuals of European ancestry. By sex-stratified and overall analysis of the identification of twelve odours and an identification score, we discovered ten independent loci, seven of them novel, with trait-wise genome-wide significance (*p*\u2009<\u20095 \u00d7 10<sup>-8</sup>) involving five odours. Seven of these loci, including four novel ones, are also significant using a stricter study-wide significance threshold (*p*\u2009<\u20093.85 \u00d7 10<sup>-9</sup>). Loci were predominantly located within clusters of olfactory receptors. Two loci were female-specific while one was sex-differential with respective candidate genes containing androgen response elements. Two-sample Mendelian randomization was applied to search for causal relationships between sex hormones, odour identification and neurodegenerative diseases. A causal negative effect was detected for Alzheimer's disease on the identification score. These findings deepen our understanding of the genetic basis of olfactory perception and its interaction with sex, prioritizing mechanisms for further molecular research.",
"authors": [
"F\u00f6rster F",
"Emmert D",
"Horn K",
"Pott J",
"Frasnelli J",
"Imtiaz MA",
"Melas K",
"Talevi V",
"Chen H",
"Engel C",
"Filosi M",
"Fornage M",
"G\u00f6gele M",
"L\u00f6ffler M",
"Mosley TH",
"Pattaro C",
"Pramstaller P",
"Shrestha S",
"Aziz NA",
"Breteler MMB",
"Wirkner K",
"Scholz M",
"Fuchsberger C"
],
"doi": "10.1038/s41467-025-61330-y",
"source_study": [
"CHRIS baseline"
],
"ar": "511",
"volume": "16",
"issue": "1",
"pages": "5434",
"pre": false,
"pdate": "2025-07-02"
},
"10.1093/ckj/sfag196": {
"title": "Combined effects of diet and genetic predisposition on kidney function outcomes",
"journal": "Clinical Kidney Journal",
"year": "2026",
"abstract": "Chronic kidney disease (CKD) is a significant global health concern. While diet is crucial to CKD prevention and management, the interaction between diet and genetic predisposition to CKD is underexplored. We conducted an exploratory investigation of the interplay between a polygenic score (PGS) for kidney function and dietary exposures in relation to glomerular filtration rate estimated based on serum creatinine (eGFRcrea) on 5717 generally healthy adult participants of the Cooperative Health Research In South Tyrol (CHRIS) study.Dietary intake was assessed using the GA2LEN food frequency questionnaire, from which we derived dietary quality indices including the Mediterranean, Alternative Healthy Eating Index (AHEI) and Dietary Approaches to Stop Hypertension (DASH) diets, and nutrients relevant to kidney function (proteins, potassium and phosphorus). Genetic predisposition to lower kidney function was quantified using a PGS derived from 131 single nucleotide polymorphisms (SNPs) whose risk alleles were associated with lower eGFRcrea and higher blood urea nitrogen. We fitted multivariable generalized additive models incorporating diet-by-PGS interaction terms to model non-linear associations with eGFRcrea.The PGS was linearly associated with eGFRcrea (estimated degrees of freedom, df = 1.00, *P* < 0.0001), regardless of dietary exposures. All nutrients showed significant linear negative associations with eGFRcrea, a pattern not observed for dietary indices. Nominally significant non-linear interactions were observed between the PGS and both protein (df = 4.93, *P* = 0.0298) and phosphorus intake (df = 5.37, *P* = 0.0283).The association of dietary protein and phosphorus intake with eGFRcrea may vary by genetic predisposition to low eGFRcrea levels, with stronger dietary effects in those with a high genetic predisposition.",
"authors": [
"Barbieri G",
"Fujii R",
"Filosi M",
"Ghasemi-Semeskandeh D",
"G\u00f6gele M",
"Malerba G",
"Zanolin ME",
"Cazzoletti L",
"Pramstaller PP",
"Pattaro C",
"Hantikainen E"
],
"doi": "10.1093/ckj/sfag196",
"source_study": [
"CHRIS baseline"
],
"ar": "509",
"volume": "",
"issue": "",
"pages": "sfag196",
"pre": false,
"pdate": "2026-01-01"
},
"10.1007/s00439-025-02761-x": {
"title": "Genomic and molecular evidence that the LncRNA DSP-AS1 modulates desmoplakin expression.",
"journal": "Human genetics",
"year": "2025",
"abstract": "Cardiac desmosomes are specialized cell junctions responsible for cardiomyocytes mechanical coupling. Mutation in desmosomal genes cause autosomal dominant and recessive familial arrhythmogenic cardiomyopathy. Motivated by evidence that Mendelian diseases share genetic architecture with common complex traits, we assessed whether common variants in any desmosomal gene were associated with cardiac conduction traits in the general population. We analysed data of N\u2009=\u20094342 Cooperative Health Research in South Tyrol (CHRIS) study participants. We tested associations between genotype imputed variants covering the five desmosomal genes Desmoplakin (*DSP*), junction plakoglobin *(JUP)*, plakophilin 2 *(PKP2)*, desmoglein 2 *(DSG2)*, and desmocollin 2 *(DSC2)*, and P-wave, PR, QRS, and QT electrocardiographic intervals, using linear mixed models. Functional annotation and interrogation of publicly available genome-wide association study resources implicated potential connection with antisense long non-coding RNAs (lncRNAs), DNA methylation sites, and complex traits. Causality was tested via two-sample Mendelian randomization (MR) analysis and validated with functional in vitro follow-up in human induced pluripotent stem cell derived cardiomyocytes (hiPSC-CMs). *DSP* variant rs2744389 was associated with QRS (*P*\u2009=\u20093.5\u2009\u00d7\u200910<sup>-6</sup>), with replication in the Microisolates in South Tyrol (MICROS) study (n\u2009=\u2009636; *P*\u2009=\u20090.010). Observing that rs2744389 was associated with *DSP-AS1* antisense lncRNA but not with *DSP* expression in multiple Genotype-Tissue Expression (GTEx) v8 tissues, we conducted two-sample Mendelian randomization analyses that identified causal effects of *DSP-AS1* on *DSP* expression (*P*\u2009=\u20096.33\u2009\u00d7\u200910<sup>-5</sup>); colocalization posterior probability\u2009=\u20090.91) and QRS (*P*\u2009=\u20090.015). In hiPSC-CMs, *DSP-AS1* expression downregulation through a specific GapmerR matching sequence led to significant *DSP* upregulation at both mRNA and protein levels. The evidence that *DSP-AS1* has a regulatory role on *DSP* opens the venue for further investigations on *DSP-AS1'*s therapeutic potential for conditions caused by reduced desmoplakin production.",
"authors": [
"Foco L",
"De Bortoli M",
"Del Greco M F",
"Frommelt LS",
"Volani C",
"Riekschnitz DA",
"Motta BM",
"Fuchsberger C",
"Delerue T",
"V\u00f6lker U",
"Huan T",
"G\u00f6gele M",
"Winkelmann J",
"D\u00f6rr M",
"Levy D",
"Waldenberger M",
"Teumer A",
"Pramstaller PP",
"Rossini A",
"Pattaro C"
],
"doi": "10.1007/s00439-025-02761-x",
"source_study": [
"CHRIS baseline"
],
"ar": "454",
"volume": "144",
"issue": "8",
"pages": "843-860",
"pre": false,
"pdate": "2025-07-30"
},
"10.1101/2025.06.12.25329492": {
"title": "Haplomics: A Snakemake pipeline for haplotype-based association analysis in multi-omics studies",
"journal": "medRxiv",
"year": "2025",
"abstract": "Genome-wide association studies (GWAS) generated thousands of loci associated with complex traits and diseases. However, to characterize of the pleiotropic, molecular and population genetic bounds of uncovered loci, investigations are conducted, that remain conceptually and practically separated. Also in the best case, such investigations proceed by one locus at a time. To address these limitations, we introduce an efficient and reproducible Snakemake pipeline for executing haplotype-based association analysis on GWAS-identified genetic loci, which is especially helpful in samples enriched with molecular omics data. Haplomics takes as input the genetic coordinates of each locus along with all available clinical and molecular phenotypes, the necessary covariates, and VCF genotype files, to reconstruct haplotypes and test them for associations with the phenotypes. The reconstructed haplotypes, the annotation of included variants, and association results are graphically displayed in an HTML report. We tested Haplomics in population-based study sample encompassing 391 traits, including 72 clinical markers, 171 serum metabolites, 148 plasma protein concentrations, and whole-exome sequencing (WES) imputed genotypes. We estimated WES-based haplotypes at 11 kidney function genetic loci from a GWAS and conducted association analyses throughout, identifying 19 significant associations after multiple testing correction. Haplomics is a scalable, easy-to-use and fast haplotype reconstruction and association pipeline that makes it possible to jointly conduct molecular and population-genetic characterization of multiple GWAS loci in unified analysis framework.",
"authors": [
"Ghasemi-Semeskandeh D",
"Foco L",
"Fujii R",
"Rainer J",
"Feli M",
"Ralser M",
"Domingues FS",
"Pramstaller PP",
"Pattaro C"
],
"doi": "10.1101/2025.06.12.25329492",
"source_study": [
"CHRIS baseline"
],
"ar": "502",
"volume": "",
"issue": "",
"pages": "",
"pre": true,
"pdate": "2025-06-12"
},
"10.1093/gigascience/giaf140": {
"title": "NApy: Efficient Statistics in Python for Large-Scale Heterogeneous Data with Enhanced Support for Missing Data.",
"journal": "GigaScience",
"year": "2025",
"abstract": "Existing Python libraries and tools lack the ability to efficiently compute statistical test results for large datasets in the presence of missing values. This presents an issue as soon as constraints on runtime and memory availability become essential considerations for a particular use case. Relevant research areas where such limitations arise include interactive tools and databases for exploratory analysis of biomedical data. To address this problem, we present the Python package NApy, which relies on a Numba and C++ backend with OpenMP parallelization to enable scalable statistical testing for mixed-type datasets in the presence of missing values. Both with respect to runtime and memory consumption, NApy outperforms competitor tools and baseline implementations with na\u00efve Python-based parallelization by orders of magnitude, thereby enabling on-the-fly analyses in interactive applications. NApy is publicly available at [https://github.com/DyHealthNet/NApy](https://github.com/DyHealthNet/NApy).",
"authors": [
"Woller F",
"Arend L",
"Fuchsberger C",
"List M",
"Blumenthal DB"
],
"doi": "10.1093/gigascience/giaf140",
"source_study": [
"CHRIS baseline"
],
"ar": "492",
"volume": "",
"issue": "",
"pages": "",
"pre": false,
"pdate": "2025-11-09"
},
"10.1101/2025.03.10.25323679": {
"title": "Characterization of metabolically healthy and unhealthy obesity through circulating proteins and metabolites",
"journal": "medRxiv",
"year": "2025",
"abstract": "**Background** <br> Individuals affected by obesity present different health trajectories and do not suffer from cardiometabolic complications all in the same way. There is a need to better understand obesity subtypes and to develop approaches for stratification. In this study we investigated both metabolomic and proteomic signatures in serum and blood plasma samples discriminating metabolically healthy from unhealthy obesity.<br>**Methods**<br> We investigated cross-sectional metabolomic and proteomic data from participants of the Cooperative Health Research in South Tyrol (CHRIS) study. Participants were grouped into metabolically healthy obesity (MHO) and metabolically unhealthy obesity (MUO) based on available health data in the study. A total of 461 individuals were included in the analysis, with n=130 MHO and n=331 MUO. Random forest (RF) classifiers were used to discriminate metabolically healthy from unhealthy obesity and to identify molecular features characteristic of MHO/MUO. Linear regression models were used to assess associations between each relevant metabolite/protein and MHO/MUO phenotypes independently of age, sex and body composition.<br>**Results**<br> The MHO/MUO RF classifier achieved a performance of AUC = 0.709, 95% CI = (0.698,0.721). Three plasma proteins and 12 circulating metabolites were identified as relevant predictors of MHO/MUO phenotypes. Linear regression models confirmed the Apolipoprotein C-III (APOC3) association to be independent of age, visceral fat composition, medication or serum triglyceride levels.<br>**Conclusion**<br> APOC3 was identified as a novel predictor for obesity stratification, highlighting the importance of circulating triglyceride levels in relation to metabolic health.",
"authors": [
"Pontali G",
"Weichenberger CX",
"Rainer J",
"Hantikainen E",
"De Graeve M",
"Mattivi F",
"Kob M",
"Ralser M",
"Pramstaller PP",
"Domingues FS"
],
"doi": "10.1101/2025.03.10.25323679",
"source_study": [
"CHRIS baseline"
],
"ar": "489",
"volume": "",
"issue": "",
"pages": "",
"pre": true,
"pdate": "2025-03-10"
},
"10.1159/000546975": {
"title": "Impact of Living in a Mountain Environment on Health and Mortality: Insights from the Alpine Population in Northern Italy.",
"journal": "Gerontology",
"year": "2025",
"abstract": "**Introduction**<br> Residing at moderate altitudes has been associated with various health benefits also affecting mortality risk. This study investigates life expectancy and disease-specific mortality rates among populations in the Italian Alps and in northern Italian lowland regions. Additionally, cardiometabolic health and serum metabolite concentrations of residents in an Alpine province across three distinct elevation zones (<1,000 m, 1,000-1,500 m, and >1,500 m above sea level) are studied. <br>**Methods**<br> Data on life expectancy and mortality rate (per ten thousand) were retrieved from the ISTAT database for 6 provinces located in the Italian Alps and 6 provinces at sea level near the Alps. Using cross-sectional data from a sub-sample of the Cooperative Health Research in South Tyrol (CHRIS) study (n=6,292), we fitted multivariable adjusted logistic regression models to investigate associations between altitude and cardiometabolic health, determined by the Cumulative Illness Rating Scale. Moreover, associations between altitude and 175 serum metabolites were evaluated through linear regression models (n=1,447). <br>**Results**<br> Population size and sex distribution were similar between provinces (p>0.485). Life expectancy at 65 years differed between areas (20.8\u00b10.4 vs 20.1\u00b10.3, for Alps vs sea-level, respectively, p=0.026). Mortality rate for diseases of the circulatory system was lower in the Alps than at sea-level (35.3\u00b15.7 vs. 44.5\u00b16.8, respectively, p=0.026). No statistically significant differences were found for mortality (Alps vs. sea-level) from all causes (108.1\u00b115.7 vs. 126.1\u00b115.5, *p*=0.065), cerebrovascular diseases (8.4\u00b12.5 vs. 12.6\u00b13.1, *p*=0.065), endocrine, nutritional and metabolic diseases (3.6\u00b11.0 vs. 5.0\u00b11.0, *p*=0.065), neoplasms (31.1\u00b14.7 vs. 34.3\u00b12.4 *p*=0.394) and diseases of the respiratory system (8.3\u00b11.7 vs. 8.8\u00b11.7, *p*=0.589). In the CHRIS study sample, living at moderate vs. low altitude level was associated with lower odds of mild to severe conditions in the hypertension (OR:0.77; 95%CI: 0.62-0.96) and endocrine-metabolic domain (OR:0.77, 95%CI: 0.61-0.97). No differences in blood serum metabolic profiles were observed between people living at different altitude levels. <br>**Conclusions**<br> Living in the Italian Alps seems to have a positive effect on life expectancy and mortality from certain diseases compared to living at sea level in northern Italy. Furthermore, living at moderate altitude conferred some cardiometabolic health benefits in the CHRIS study population, even after corrections for confounding factors. The metabolite profile in a sub-sample did, however, not reveal any significant differences between altitude levels.",
"authors": [
"Hantikainen E",
"Dordevic N",
"Neunhaeuserer D",
"Pramstaller PP",
"Rainer J",
"Gatterer H"
],
"doi": "10.1159/000546975",
"source_study": [
"CHRIS baseline"
],
"ar": "484",
"volume": "",
"issue": "",
"pages": "1-22",
"pre": false,
"pdate": "2025-06-17"
},
"10.1007/s00439-017-1785-8": {
"title": "Sequential recruitment of study participants may inflate genetic heritability estimates.",
"journal": "Human genetics",
"year": "2017",
"abstract": "After the success of genome-wide association studies to uncover complex trait loci, attempts to explain the remaining genetic heritability (h <sup>2</sup>) are mainly focused on unraveling rare variant associations and gene-gene or gene-environment interactions. Little attention is paid to the possibility that h <sup>2</sup> estimates are inflated as a consequence of the epidemiological study design. We studied the time series of 54 biochemical traits in 4373 individuals from the Cooperative Health Research In South Tyrol (CHRIS) study, a pedigree-based study enrolling ten participants/day over several years, with close relatives preferentially invited within the same day. We observed distributional changes of measured traits over time. We hypothesized that the combination of such changes with the pedigree structure might generate a shared-environment component with consequent h <sup>2</sup> inflation. We performed variance components (VC) h <sup>2</sup> estimation for all traits after accounting for the enrollment period in a linear mixed model (two-stage approach). Accounting for the enrollment period caused a median h <sup>2</sup> reduction of 4%. For 9 traits, the reduction was of >20%. Results were confirmed by a Bayesian Markov chain Monte Carlo analysis with all VCs included at the same time (one-stage approach). The electrolytes were the traits most affected by the enrollment period. The h <sup>2</sup> inflation was independent of the h <sup>2</sup> magnitude, laboratory protocol changes, and length of the enrollment period. The enrollment process may induce shared-environment effects even under very stringent and standardized operating procedures, causing h <sup>2</sup> inflation. Including the day of participation as a random effect is a sensitive way to avoid overestimation.",
"authors": [
"Noce D",
"G\u00f6gele M",
"Schwienbacher C",
"Caprioli G",
"De Grandi A",
"Foco L",
"Platzgummer S",
"Pramstaller PP",
"Pattaro C"
],
"doi": "10.1007/s00439-017-1785-8",
"source_study": [
"CHRIS baseline"
],
"ar": "477",
"volume": "136",
"issue": "6",
"pages": "743-757",
"pre": false,
"pdate": "2017-04-05"
},
"10.1053/j.jrn.2024.03.003": {
"title": "Associations Between Dietary Patterns and Kidney Health Assessed in the Population-Based CHRIS Study Using Reduced Rank Regression.",
"journal": "Journal of renal nutrition",
"year": "2024",
"abstract": "**Objective**<br> While diet plays a key role in chronic kidney disease (CKD) management, the potential for diet to impact CKD prevention in the general population is less clear. Using a priori knowledge, we derived disease-related dietary patterns (DPs) through reduced rank regression (RRR) and investigated associations with kidney function, separately focusing on generally healthy individuals and those with self-reported kidney diseases, hypertension, or diabetes mellitus. <br>**Methods**<br> Eight thousand six hundred eighty-six participants from the population-based Cooperative Health Research in South Tyrol study were split into a group free of kidney disease, hypertension and diabetes (n\u00a0=\u00a06,133) and a group with any of the 3 conditions (n\u00a0=\u00a02,553). Diet was assessed through the self-administered Global Allergy and Asthma Network of Excellence food frequency questionnaire and DPs were derived through RRR selecting food frequency questionnaire-derived sodium, potassium, phosphorus, and protein intake as mediators. Outcomes were creatinine-based estimated glomerular filtration rate, urinary albumin-to-creatinine ratio, CKD and microalbuminuria. Multiple linear and logistic models were used to assess associations between RRR-based DPs and kidney outcomes separately in the 2 analytic groups. <br>**Results**<br> We identified 3 DPs, where high adherence reflected high levels of all nutrients (DP1), high potassium-phosphorus and low protein-sodium levels (DP2), and low potassium-sodium and high protein-phosphorus levels (DP3), respectively. We observed heterogeneous associations with kidney outcomes, varying by analytic group and sex. Kidney outcomes were much more strongly associated with DPs than with single nutrients. <br>**Conclusion**<br> RRR is a feasible approach to estimate disease-related DPs and explore the combined effects of nutrients on kidney health. Heterogeneous associations across kidney outcomes suggest possible specificity to kidney function or damage. In individuals reporting kidney disease, hypertension or diabetes, specific dietary habits were associated with better kidney health, indicating that disease-specific dietary interventions can be effective for disease control.",
"authors": [
"Barbieri G",
"Garcia-Larsen V",
"Lundin R",
"Fujii R",
"Melotti R",
"G\u00f6gele M",
"Christopher KB",
"Cazzoletti L",
"Pramstaller PP",
"Zanolin ME",
"Pattaro C",
"Hantikainen E"
],
"doi": "10.1053/j.jrn.2024.03.003",
"source_study": [
"CHRIS baseline"
],
"ar": "398",
"volume": "34",
"issue": "5",
"pages": "427-437",
"pre": false,
"pdate": "2024-03-24"
},
"10.1186/s12882-026-04896-z": {
"title": "DASH diet, Reduced Rank Regression Dietary Patterns and relations with kidney function in the CHRIS general population study.",
"journal": "BMC nephrology",
"year": "2026",
"abstract": "**Background**<br> Chronic kidney disease (CKD) is a growing public health concern, closely linked to aging and chronic conditions such as diabetes, cardiovascular disease, and hypertension. Diet is a modifiable risk factor for kidney function, but evidence on how specific dietary patterns (DPs) relate to kidney health in healthy populations remains limited. To address this, we evaluated associations between DPs and kidney function, considering sex and menstrual status. DPs were derived using both an a priori approach (DASH) and a hybrid method (RRR), capturing established dietary recommendations as well as population-specific behaviours relevant to kidney health. <br>**Methods**<br> We analysed cross-sectional data from 6133 healthy adult participants of the Cooperative Health Research In South Tyrol (CHRIS) study. Participants self-reporting previous diagnoses of any kidney disease, hypertension, or diabetes were excluded. Using self-reported food frequency questionnaire data, we derived the DASH-score and two RRR-based sex-specific DP-scores based on nine cardio-renal-metabolic parameters. We applied sex-stratified linear and non-linear models to examine associations with creatinine-based eGFR, including interaction and stratified analyses by menstrual status in females. <br>**Results**<br> In males, a DP reflecting high intake of cereals, whole grains, sugar, fruits, and legumes, and low intake of beer, red and processed meat was associated with higher eGFR levels (\u03b2\u2009=\u20090.75, *p*\u2009=\u20090.0001). Similarly, higher adherence to the DASH diet was also positively associated with eGFR (\u03b2\u2009=\u20090.64, *p*\u2009=\u20090.0029). In females, the associations varied by menstrual status. Among those with ceased menstruation, a DP reflecting low intake of meat, spirits, and refined grains, and high intake of whole grains and dairy products was associated with higher eGFR (\u03b2\u2009=\u20091.11, *p*\u2009=\u20090.0049). In females still experiencing regular menstruation, a DP reflecting high intake of beef, nuts, beer, and legumes, and low intake of refined grains was associated with lower eGFR (\u03b2\u2009=\u2009\u22120.43, *p*\u2009=\u20090.0326). No association was observed with the DASH score in females.<br>**Conclusions**<br> The DASH-style diet is associated with better kidney function in males, but not in females. Identifying sex-specific kidney function-oriented DPs using RRR provides new insights into the diet-eGFR relationship, suggesting potential effect modification by menstrual status.",
"authors": [
"Barbieri G",
"Garcia-Larsen V",
"Lundin R",
"Fujii R",
"Ferraro PM",
"Gambaro G",
"Melotti R",
"G\u00f6gele M",
"Cazzoletti L",
"Pramstaller PP",
"Zanolin ME",
"Pattaro C",
"Hantikainen E"
],
"doi": "10.1186/s12882-026-04896-z",
"source_study": [
"CHRIS baseline"
],
"ar": "459",
"volume": "27",
"issue": "1",
"pages": "",
"pre": false,
"pdate": "2026-04-21"
},
"10.1007/s40620-024-02157-6": {
"title": "Development and evaluation of a kidney health questionnaire and estimates of chronic kidney disease prevalence in the Cooperative Health Research in South Tyrol (CHRIS) study.",
"journal": "Journal of nephrology",
"year": "2025",
"abstract": "**Background**<br> Kidney diseases are a public health burden but are poorly investigated in the general population. In light of inadequate survey tools, we developed a novel questionnaire for use in population-based studies, to retrospectively assess kidney diseases. <br>**Methods**<br> The questionnaire covered general kidney diseases, reduced kidney function, and renal surgeries. It was administered between 2011 and 2018 to 11,684 participants (median age\u2009=\u200945 years) of the Cooperative Health Research in South Tyrol (CHRIS) study. Fasting estimated glomerular filtration rate (eGFR) and urinary albumin-to-creatinine ratio (UACR) were measured. By factor analysis we contextualized the questionnaire content with respect to the\u00a0biochemical measurements. We estimated overall and sex-stratified prevalence of kidney diseases, including possible CKD, calibrating them to the general target population via relative sampling weights. <br>**Results**<br> Population-representative prevalence of glomerulonephritis, pyelonephritis, and congenital kidney diseases was 1.0%, 3.0%, and 0.2%, respectively, with corresponding odds ratios for females versus males of 1.4 (95% confidence interval: 1.0, 2.0), 8.7 (6.2, 12.3), and 0.7 (0.3, 1.6), respectively. Prevalence of kidney dysfunction (eGFR\u2009<\u200960\u00a0mL/min/1.73\u00a0m(2) or UACR\u2009>\u200930\u00a0mg/g) was 8.59%, while prevalence of self-reported CKD was 0.69%, indicating 95.3% of\u00a0lack of disease awareness, with a similar figure in people with diabetes or hypertension. Overall, 15.76% of the population was affected by a kidney disease of any kind. <br>**Conclusion**<br> In the Val Venosta/Vinschgau alpine district, CKD prevalence aligned with Western European estimates. Kidney health questionnaire implementation in population studies is feasible and valuable to assess CKD awareness, which we found to be dramatically low.",
"authors": [
"Barbieri G",
"Cazzoletti L",
"Melotti R",
"Hantikainen E",
"Lundin R",
"Barin L",
"G\u00f6gele M",
"Riegler P",
"Ferraro PM",
"Pramstaller PP",
"Gambaro G",
"Zanolin ME",
"Pattaro C"
],
"doi": "10.1007/s40620-024-02157-6",
"source_study": [
"CHRIS baseline"
],
"ar": "442",
"volume": "38",
"issue": "2",
"pages": "521-530",
"pre": false,
"pdate": "2024-11-27"
},
"10.1016/j.jad.2025.03.055": {
"title": "The influence of affective temperaments on sleep quality in a general population sample. Data report from the CHRIS study.",
"journal": "Journal of affective disorders",
"year": "2025",
"abstract": "**Background**<br> Affective temperaments predispose to life adaptation and affective disorders. The relationship between temperaments and sleep quality is rarely investigated in community-based studies. We hypothesized that cyclothymic-related temperaments relate to worse sleep quality, whereas the hyperthymic temperament favours sleep quality. <br>**Method**<br> We investigated 3701 18 to 65\u00a0years old adults from the population-based CHRIS study in Italy. Participants were 54\u00a0% females, mean age 38.5\u00a0years. The Pittsburgh Sleep Quality Index (PSQI) was the primary outcome score. Five affective temperaments split into quartiles for direct comparison from the TEMPS-M questionnaire were the exposures of interest. Additional covariates comprised sex, age, trait anxiety, and sleep quality-related lifestyles assessed via interviews, self-administered questionnaires or instrumental measurements. <br>**Results**<br> The hyperthymic temperament showed a negative association (better sleep quality) with the global PSQI, whereas the cyclothymic-related temperaments had all associations in opposite direction. While inclusion of trait anxiety appeared to mediate some results, the anxious and other cyclothymic related temperaments were still directly associated with multiple dimensions of poor sleep quality. <br>**Limitations**<br> The cross-sectional design, possible selection into the study by temperamental background or sleep disorders, and no clinically validated self-assessed psychiatric constructs represent possible weaknesses. <br>**Conclusions**<br> Our findings support the hypothesis of a biological binary diathesis of affective temperaments, with hyperthymic and cyclothymic-related temperaments predisposing sleep quality in an antithetical way.",
"authors": [
"Favaretto E",
"G\u00f6gele M",
"Bedani F",
"Giovannini S",
"Pramstaller PP",
"Perugi G",
"Erfurth A",
"Sani G",
"Hicks AA",
"Melotti R"
],
"doi": "10.1016/j.jad.2025.03.055",
"source_study": [
"CHRIS baseline"
],
"ar": "470",
"volume": "380",
"issue": "",
"pages": "162-170",
"pre": false,
"pdate": "2025-03-22"
},
"10.1038/s41591-025-03827-z": {
"title": "Polygenic prediction of body mass index and obesity through the life course and across ancestries.",
"journal": "Nature medicine",
"year": "2025",
"abstract": "Polygenic scores (PGSs) for body mass index (BMI) may guide early prevention and targeted treatment of obesity. Using genetic data from up to 5.1 million people (4.6% African ancestry, 14.4% American ancestry, 8.4% East Asian ancestry, 71.1% European ancestry and 1.5% South Asian ancestry) from the GIANT consortium and 23andMe, Inc., we developed ancestry-specific and multi-ancestry PGSs. The multi-ancestry score explained 17.6% of BMI variation among UK Biobank participants of European ancestry. For other populations, this ranged from 16% in East Asian-Americans to 2.2% in rural Ugandans. In the ALSPAC study, children with higher PGSs showed accelerated BMI gain from age 2.5\u2009years to adolescence, with earlier adiposity rebound. Adding the PGS to predictors available at birth nearly doubled explained variance for BMI from age 5 onward (for example, from 11% to 21% at age 8). Up to age 5, adding the PGS to early-life BMI improved prediction of BMI at age 18 (for example, from 22% to 35% at age 5). Higher PGSs were associated with greater adult weight gain. In intensive lifestyle intervention trials, individuals with higher PGSs lost modestly more weight in the first year (0.55\u2009kg per s.d.) but were more likely to regain it. Overall, these data show that PGSs have the potential to improve obesity prediction, particularly when implemented early in life.",
"authors": [
"Smit RAJ",
"Wade KH",
"Hui Q",
"Arias JD",
"Yin X",
"Christiansen MR",
"Yengo L",
"Preuss MH",
"Nakabuye M",
"Rocheleau G",
"Graham SE",
"Buchanan VL",
"Chittoor G",
"Graff M",
"Guindo-Mart\u00ednez M",
"Lu Y",
"Marouli E",
"Sakaue S",
"Spracklen CN",
"Vedantam S",
"Wilson EP",
"Chen SH",
"Ferreira T",
"Ji Y",
"Karaderi T",
"L\u00fcll K",
"Machado M",
"Malden DE",
"Medina-Gomez C",
"Moore A",
"R\u00fceger S",
"Akiyama M",
"Allison MA",
"Alvarez M",
"Andersen MK",
"Appadurai V",
"Arbeeva L",
"Bartell E",
"Bhaskar S",
"Bielak LF",
"Bis JC",
"Bollepalli S",
"Bork-Jensen J",
"Bradfield JP",
"Bradford Y",
"Brandl C",
"Braund PS",
"Brody JA",
"Broeckel U",
"Burgdorf KS",
"Cade BE",
"Cai Q",
"Camarda S",
"Campbell A",
"Ca\u00f1adas-Garre M",
"Chai JF",
"Chesi A",
"Choi SH",
"Christofidou P",
"Couture C",
"Cuellar-Partida G",
"Danning R",
"Degenhardt F",
"Delgado GE",
"Delitala A",
"Demirkan A",
"Deng X",
"Dietl A",
"Dimitriou M",
"Dimitrov L",
"Dorajoo R",
"Eichelmann F",
"Eliasen AU",
"Engmann JE",
"Erdos MR",
"Fairhurst-Hunter Z",
"Farmaki AE",
"Faul JD",
"Fernandez-Lopez JC",
"Forer L",
"Frank M",
"Freitag-Wolf S",
"Fritsche LG",
"Fuchsberger C",
"Galesloot TE",
"Gao Y",
"Geller F",
"Giannakopoulou O",
"Giulianini F",
"Gjesing AP",
"Goel A",
"Gordon SD",
"Gorski M",
"Grove J",
"Guo X",
"Gustafsson S",
"Haessler J",
"Hansen TF",
"Havulinna AS",
"Haworth SJ",
"Heard-Costa N",
"Hemerich D",
"Highland HM",
"Hindy G",
"Ho YL",
"Hofer E",
"Holliday E",
"Horn K",
"Hornsby WE",
"Hottenga JJ",
"Huang H",
"Huang J",
"Huerta-Chagoya A",
"Huo S",
"Hwang MY",
"Hwu CM",
"Iha H",
"Ikeda DD",
"Isono M",
"Jackson AU",
"Jansen IE",
"Jiang Y",
"Johansson I",
"Jonsson A",
"J\u00f8rgensen T",
"Kalafati IP",
"Kanai M",
"Kanoni S",
"K\u00e5rhus LL",
"Kasturiratne A",
"Katsuya T",
"Kawaguchi T",
"Kember RL",
"Kentistou KA",
"Kim D",
"Kim HN",
"Kim YJ",
"Kleber ME",
"Knol MJ",
"Kurbasic A",
"Lauzon M",
"Le P",
"Lea R",
"Lee JY",
"Lee WJ",
"Leonard HL",
"Li H",
"Li SA",
"Li X",
"Li X",
"Liang J",
"Lin H",
"Lin K",
"Liu J",
"Liu X",
"Lo KS",
"Long J",
"Lores-Motta L",
"Luan J",
"Lyssenko V",
"Lyytik\u00e4inen LP",
"Mahajan A",
"Malik MZ",
"Mamakou V",
"Mangino M",
"Manichaikul A",
"Marten J",
"Mattheisen M",
"McDaid AF",
"Mei Q",
"Meiselbach H",
"Melendez TL",
"Milaneschi Y",
"Miller JE",
"Millwood IY",
"Mishra PP",
"Mitchell RE",
"M\u00f8llehave LT",
"Mononen N",
"Mucha S",
"Munz M",
"Mykk\u00e4nen J",
"Nakatochi M",
"Nardone GG",
"Nelson CP",
"Nethander M",
"Nho CW",
"Nielsen AA",
"Nolte IM",
"Nongmaithem SS",
"Noordam R",
"Ntalla I",
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