Merge pull request #962 from GenomicsStandardsConsortium/961-linkml-linting-errors-are-not-exposed-in-pr

publish LinkML linting artifact; don't try to interleave

Author: turbomam

.github/workflows/lint-linkml.yml

@@ -28,18 +28,27 @@ jobs:
 
       - name: Run LinkML Linting
         run: |
-          ## Results file header and basic formatting
-          printf '# LinkML Linting Results \n\n' > linting-results.md
-          printf "$(poetry run linkml --version) linting found the following issues. \n\n" >> linting-results.md
-          printf "_For more information about the linting rule categories, see the [LinkML linter documentation](https://linkml.io/linkml/schemas/linter.html#rules)._\n" >> linting-results.md
-          ## Lint the schema, and further format
           poetry run linkml lint --ignore-warnings -f markdown src/mixs/schema/mixs.yaml >> linting-results.md
-      - name: Reformat log
-        run: |
-          sed -i -e 's/#### Errors/> [!CAUTION]/' -e 's/#### Warnings/> [!WARNING]/' -e 's/^*/> */' -e '/###.*yaml/ s/$/\n/' -e '/###.*yaml/ s/^###/**File**:/' linting-results.md
-      - name: Post PR comment
-        uses: mshick/add-pr-comment@v2 # v2
+          
+      - name: Upload linting report
+        uses: actions/upload-artifact@v3
         with:
-          message-path: linting-results.md
-          repo-token: ${{ secrets.GITHUB_TOKEN }}
-          allow-repeats: true
+          name: linting-results
+          path: linting-results.md
+
+#        run: |
+#          ## Results file header and basic formatting
+#          printf '# LinkML Linting Results \n\n' > linting-results.md
+#          printf "$(poetry run linkml --version) linting found the following issues. \n\n" >> linting-results.md
+#          printf "_For more information about the linting rule categories, see the [LinkML linter documentation](https://linkml.io/linkml/schemas/linter.html#rules)._\n" >> linting-results.md
+#          ## Lint the schema, and further format
+#          poetry run linkml lint --ignore-warnings -f markdown src/mixs/schema/mixs.yaml >> linting-results.md
+#      - name: Reformat log
+#        run: |
+#          sed -i -e 's/#### Errors/> [!CAUTION]/' -e 's/#### Warnings/> [!WARNING]/' -e 's/^*/> */' -e '/###.*yaml/ s/$/\n/' -e '/###.*yaml/ s/^###/**File**:/' linting-results.md
+#      - name: Post PR comment
+#        uses: mshick/add-pr-comment@v2 # v2
+#        with:
+#          message-path: linting-results.md
+#          repo-token: ${{ secrets.GITHUB_TOKEN }}
+#          allow-repeats: true