@@ -16,6 +16,7 @@ prefixes:
16
16
shex: http://www.w3.org/ns/shex#
17
17
schema: http://schema.org/
18
18
SO: http://purl.obolibrary.org/obo/SO_ # Sequence Ontology
19
+ NCIT: http://purl.obolibrary.org/obo/NCIT_
19
20
default_prefix: MIXS
20
21
default_range: string
21
22
subsets:
@@ -25,6 +26,17 @@ subsets:
25
26
nucleic acid sequence source:
26
27
investigation:
27
28
enums:
29
+ SeasonEnum:
30
+ permissible_values:
31
+ 'autumn [NCIT:C94733]':
32
+ meaning: NCIT:C94733
33
+ 'spring [NCIT:C94731]':
34
+ meaning: NCIT:C94731
35
+ 'summer [NCIT:C94732]':
36
+ meaning: NCIT:C94732
37
+ 'winter [NCIT:C94730]':
38
+ meaning: NCIT:C94730
39
+
28
40
InsdcMissingValueEnum:
29
41
description: Permissible values recommended by INSDC for reporting missing metadata values.
30
42
comments:
@@ -12032,23 +12044,16 @@ slots:
12032
12044
slot_uri: MIXS:0000054
12033
12045
season:
12034
12046
annotations:
12035
- Expected_value: autumn [NCIT:C94733], spring [NCIT:C94731], summer [NCIT:C94732], winter
12036
- [NCIT:C94730]
12037
12047
description: The season when sampling occurred. Any of the four periods into which
12038
12048
the year is divided by the equinoxes and solstices. This field accepts terms
12039
12049
listed under season (http://purl.obolibrary.org/obo/NCIT_C94729)
12040
12050
title: season
12041
- comments:
12042
- - autumn [NCIT:C94733] does not match ^\\S+.*\\S+ \\[[a-zA-Z]{2,}:\\d+\\]$
12043
- - would require ^\\S+.*\\S+ \\[[a-zA-Z]{2,}:[a-zA-Z0-9]\\]$
12044
12051
examples:
12045
12052
- value: autumn [NCIT:C94733]
12046
12053
keywords:
12047
12054
- season
12048
- string_serialization: '{termLabel} [{termID}]'
12049
12055
slot_uri: MIXS:0000829
12050
- range: string
12051
- pattern: ^\S+.*\S+ \[[a-zA-Z]{2,}:[a-zA-Z0-9]+\]$
12056
+ range: SeasonEnum
12052
12057
season_environment:
12053
12058
description: Treatment involving an exposure to a particular season (e.g. Winter,
12054
12059
summer, rabi, rainy etc.), treatment regimen including how many times the treatment
0 commit comments