Fix Dependabot security alerts, add least-privilege CI permissions, f… #86

Job	Run time
lint-and-typecheck	9s
test (tests/commands)	22s
test (tests/auth)	13s
test (tests/apps)	16s
test (tests/chat)	38s
test (tests/adapters)	14s
test (tests/core)	16s
test (tests/config)	15s
test (tests/context)	13s
test (tests/display)	20s
test (tests/model_management)	15s
test (tests/tools)	19s
test (tests/memory)	16s
test (tests/utils)	17s
test (tests/interactive)	14s
test (tests/test_command_consistency.py tests/test_mcp_cli_init.py tests/test_mcp_cli_main_entry.py)	16s
test (tests/cli)	19s
report-coverage	12s
	5m 4s

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