Sync CryoCloud environment

[scottyhq]

Addresses #17 (comment)

Since CryoCloud has everything in our existing environment + a bunch of other stuff, the easiest thing seems to be just to overwrite the current environment.yml. However, I commented a bunch of stuff that is user-interface specific and also things that are not on mac-osx since I like having the ability to work on different platforms

[scottyhq]

Could not lock the environment for platform osx-arm64
Could not solve for environment specs
The following packages are incompatible
├─ code-server ~=4.16.1  does not exist (perhaps a typo or a missing channel);
├─ jupyter-syncthing-proxy 1.0.3  is not installable because it requires
│  └─ syncthing, which does not exist (perhaps a missing channel);
└─ syncthing ~=1.22.1  does not exist (perhaps a typo or a missing channel).

[scottyhq]

There are some big packages here (qgis) that don't seem necessary for executing tutorial notebooks, but can bring them back if needed...

[weiji14]

There's this error on running Sphinx build:

Running Sphinx v5.1.1

Extension error:
Could not import extension build_gallery (exception: cannot import name 'ExtensionMetadata' from 'sphinx.util.typing' (unknown location))
Traceback (most recent call last):
  File "/home/runner/micromamba/envs/hackweek/lib/python3.11/site-packages/sphinx/registry.py", line 442, in load_extension
    mod = import_module(extname)
          ^^^^^^^^^^^^^^^^^^^^^^
  File "/home/runner/micromamba/envs/hackweek/lib/python3.11/importlib/__init__.py", line 126, in import_module
    return _bootstrap._gcd_import(name[level:], package, level)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "<frozen importlib._bootstrap>", line 1204, in _gcd_import
  File "<frozen importlib._bootstrap>", line 1176, in _find_and_load
  File "<frozen importlib._bootstrap>", line 1147, in _find_and_load_unlocked
  File "<frozen importlib._bootstrap>", line 690, in _load_unlocked
  File "<frozen importlib._bootstrap_external>", line 940, in exec_module
  File "<frozen importlib._bootstrap>", line 241, in _call_with_frames_removed
  File "/home/runner/work/website-2024/website-2024/book/_ext/build_gallery.py", line 12, in <module>
    from sphinx.util.typing import ExtensionMetadata
ImportError: cannot import name 'ExtensionMetadata' from 'sphinx.util.typing' (unknown location)

Looking to see which dependency is preventing a newer version of Sphinx from being installed...

Edit: It looks like sphinx.util.typing.ExtensionMetadata was made public in Sphinx 7.3.0 (sphinx-doc/sphinx#12153), so we'll either need to update to that version, or remove that ExtensionMetadata type hint from the 'book/_ext/build_gallery.py' file.

[weiji14]

Couple of suggestions, should hopefully fix the ImportError: cannot import name 'ExtensionMetadata' from 'sphinx.util.typing' error. I'll update these over at https://github.com/CryoInTheCloud/hub-image too in a bit.

[jomey]

I on board with this approach. Commented on a few lines for a little more aggressive reduction of the library stack to ease up resolving the environment to a working state.

[github-actions]

🚀 Deployed on https://deploy-preview-18--icesat2-website2024.netlify.app

[scottyhq]

Thank you @weiji14 & @jomey for the helpful input here. Going to merge this!