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Welcome to an interactive workshop covering the nitty gritty of Genome Assembly. We welcome researchers and students to come and explore both the scientific theories and techniques of a genome assembly in eukaryotes and prokaryotes.
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This interactive workshop is filled with tips and tricks for Genome Assembly. All researchers and students with command line and HPC experience are welcome to come and explore the assumptions and limitations of a genome assembly in eukaryotes and prokaryotes.
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In this workshop, we will delve into:
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In this workshop, we will cover the following topics:
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*Scientific Fundamentals: Understand the essential concepts that drive both wet lab procedures and computational strategies in genome assembly.
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* Hands-On Coding: Experience real-world application through coding sessions where you'll learn to use cutting-edge genome assembly software.
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* Evaluation of Assemblies: Gain the expertise to critically assess the outcomes of genome assembly projects.
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*Assembly Fundamentals: Understand the assumptions and limitations in genome assembly due to biology, sequencing technology and assembly tools.
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* Hands-On Coding: Complete a genome assembly from start to finish: quality control, assembly, scaffolding and polishing.
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* Evaluation of Assemblies: Not all genomes are equal! Gain the expertise to critically assess the quality of a genome assembly.
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