diff --git a/align_system/algorithms/abstracts.py b/align_system/algorithms/abstracts.py index e10310c9..029f8021 100644 --- a/align_system/algorithms/abstracts.py +++ b/align_system/algorithms/abstracts.py @@ -16,11 +16,11 @@ def choose_action(self, class StructuredInferenceEngine(ABC): @abstractmethod - def dialog_to_prompt(dialog: list[dict]) -> str: + def dialog_to_prompt(self, dialog: list[dict]) -> str: pass @abstractmethod - def run_inference(prompts: Union[str, list[str]], + def run_inference(self, prompts: Union[str, list[str]], schema: str) -> Union[dict, list[dict]]: pass diff --git a/align_system/algorithms/openai_inference_engine.py b/align_system/algorithms/openai_inference_engine.py new file mode 100644 index 00000000..3ec0b1eb --- /dev/null +++ b/align_system/algorithms/openai_inference_engine.py @@ -0,0 +1,450 @@ +import json +import time +import tempfile + +from typing import Union, Optional, Literal, List, Dict +from openai import OpenAI, not_given +from textwrap import dedent + +from align_system.algorithms.abstracts import StructuredInferenceEngine +from align_system.utils import logging + +log = logging.getLogger(__name__) + +class OpenAIInferenceEngine(StructuredInferenceEngine): + """StructuredInferenceEngine implementation that interfaces with the OpenAI Responses API. + + Supports two execution modes: + - **Synchronous** (default for single prompts): calls the Responses + API directly for each prompt. + - **Batch** (default for multiple prompts): uploads prompts as JSONL + to the OpenAI Batch API and polls for completion. + + Also works against vLLM-compatible servers when ``base_url`` is provided, + in which case the "developer" role rename is skipped. + """ + + def __init__(self, + model_name: str, + temperature: float, + top_p: float, + max_tokens: int, + base_url: Optional[str] = None, + api_key: Optional[str] = None, + _strict_response_validation: bool = False, + timeout: Union[float, None, Literal["NOT_GIVEN"]] = "NOT_GIVEN", + use_batch_api: bool = True + ): + """Initialize the OpenAI inference engine. + + Args: + model_name: OpenAI model identifier (e.g. "gpt-5.2"). + temperature: Sampling temperature (currently disabled server-side). + top_p: Nucleus sampling parameter (currently disabled server-side). + max_tokens: Maximum output tokens per response. + base_url: Optional URL for a vLLM-compatible server. When set, + the "system" role is kept instead of being renamed to + "developer". + api_key: OpenAI API key. Defaults to the ``OPENAI_API_KEY`` + environment variable. + _strict_response_validation: When True, raise on unexpected + fields in API responses. + timeout: Request timeout in seconds, or None for no timeout. + use_batch_api: When True (default), use the Batch API for + multi-prompt requests. + """ + + self.client = OpenAI( + api_key=api_key, + base_url=base_url, + timeout=not_given if timeout == "NOT_GIVEN" else timeout, + _strict_response_validation=_strict_response_validation + ) + + self.using_vllm = base_url is not None + self.use_batch_api = use_batch_api + + self.static_responses_kwargs = { + "model": model_name, + "reasoning": {"effort": "medium", "summary": "auto"}, + "max_output_tokens": max_tokens, + # Temporarily disabled. + # Server is telling me these are not supported, but docs say they are. + # "temperature": temperature, + # "top_p": top_p, + "service_tier":"flex", + "store":True + } + + self.static_batches_kwargs = { + "model": model_name, + "reasoning": {"effort": "medium", "summary": "auto"}, + "max_output_tokens": max_tokens, + # Temporarily disabled. + # Server is telling me these are not supported, but docs say they are. + # "temperature": temperature, + # "top_p": top_p, + "store":True + } + + self._cache_repr: str = dedent(f""" + {self.__class__.__module__}.{self.__class__.__name__}( + model_name="{model_name}", + temperature="{temperature}", + top_p="{top_p}", + max_tokens="{max_tokens}", + base_url="{base_url}", + api_key="{api_key}", + _strict_response_validation="{_strict_response_validation}", + timeout="{timeout}" + )""").strip() + + def dialog_to_prompt(self, dialog: list[dict]) -> str: + """Serialize a dialog into a JSON string for use with ``run_inference``. + + Converts each element to a plain dict. When targeting the native + OpenAI API (not vLLM), "system" roles are renamed to "developer" + via ``_conform_to_openai_prompt_roles``. + + Args: + dialog: List of DialogElements or message dicts with "role" and + "content" keys. + + Returns: + JSON string encoding the list of message dicts, suitable for + passing directly to ``run_inference`` or ``run_inference_unstructured``. + """ + # Convert DialogElement objects to dicts if needed + prompts = [dict(d) for d in dialog] + if not self.using_vllm: + prompts = _conform_to_openai_prompt_roles(prompts) + return json.dumps(prompts) + + def run_inference(self, prompts: Union[str, List[str]], schema: str) -> Union[Dict, List[Dict]]: + """Run inference with structured (JSON schema) output. + + Args: + prompts: A single JSON-serialized prompt string or a list of them. + schema: JSON schema string that the model output must conform to. + + Returns: + A list of parsed response dicts (one per prompt). + """ + return self._run_inference(prompts, schema) + + def run_inference_unstructured(self, prompts: Union[str, list[str]]) -> Union[Dict, List[Dict]]: + """Run inference without structured output constraints. + + Args: + prompts: A single JSON-serialized prompt string or a list of them. + + Returns: + A list of dicts with a "response" key containing the raw text. + """ + return self._run_inference(prompts) + + def _run_inference(self, prompts: Union[str, list[str]], schema: Optional[str] = None) -> Union[Dict, List[Dict]]: + """Internal dispatch: deserializes prompts and routes to sync or batch execution. + + Uses the Batch API when multiple prompts are provided and + ``use_batch_api`` is True; otherwise processes synchronously. + + Args: + prompts: A single JSON-serialized prompt string or a list of them. + schema: Optional JSON schema string for structured output. + + Returns: + A list of parsed response dicts. + """ + json_prompts = _deserialize_prompts(prompts) + text_kwargs = _response_format_field(schema) + + # Use batch API if enabled and we have multiple prompts + if len(json_prompts) > 1 and self.use_batch_api: + return self._create_batches(json_prompts, text_kwargs) + else: + return self._create_responses(json_prompts, text_kwargs) + + + def _create_responses(self, prompts: List[List[Dict]], text_kwargs): + """Run prompts synchronously via the Responses API. + + Iterates over each prompt, calls ``responses.create``, and + extracts the parsed content from each response. + + Args: + prompts: List of deserialized message lists. + text_kwargs: Dict with ``text`` key for structured output + format, or empty dict for unstructured. + + Returns: + List of parsed response dicts (one per prompt). + """ + results = [] + for p in prompts: + response = self.client.responses.create(input=json.dumps(p), **text_kwargs, **self.static_responses_kwargs) + # Convert response object to dict for processing + response_dict = response.model_dump() + parsed_result = _extract_response_content(response_dict, has_schema=bool(text_kwargs)) + results.append(parsed_result) + return results + + def _create_batches(self, prompts: List[List[Dict]], text_kwarg: dict) -> List[Dict]: + """ + Run inference using OpenAI Batch API for async processing. + Docs: https://platform.openai.com/docs/guides/batch + + Args: + prompts: List of List of 2 JSON dictionaries each + text_kwarg: Dictionary containing text format configuration + + Returns: + List of parsed response dictionaries + """ + # Prepare batch requests in JSONL format + batch_requests = [] + for idx, prompt in enumerate(prompts): + # Build the request parameters + request_params = { + **self.static_batches_kwargs, + **text_kwarg, + "input": prompt + } + + # Create batch request in the format expected by the Batch API + batch_request = { + "custom_id": f"request-{idx}", + "method": "POST", + "url": "/v1/responses", + "body": request_params + } + batch_requests.append(batch_request) + + # Write batch requests to a temporary JSONL file + with tempfile.NamedTemporaryFile(mode='w', suffix='.jsonl', delete=False) as f: + for request in batch_requests: + f.write(json.dumps(request) + '\n') + batch_file_path = f.name + + try: + # Upload the batch file + with open(batch_file_path, 'rb') as f: + batch_input_file = self.client.files.create( + file=f, + purpose="batch" + ) + + # Create the batch + batch = self.client.batches.create( + input_file_id=batch_input_file.id, + endpoint="/v1/responses", + completion_window="24h" + ) + + # Poll for batch completion + log.info(f"Batch {batch.id} created, polling for completion...") + while batch.status in ["validating", "in_progress", "finalizing"]: + time.sleep(5) # Poll every 5 seconds + batch = self.client.batches.retrieve(batch.id) + log.debug(f"Batch status: {batch.status}") + + if batch.status == "completed": + # Download and parse results + result_file_id = batch.output_file_id + + # Retry a few times if output_file_id is None (API may need time to populate it) + retry_count = 0 + max_retries = 3 + while result_file_id is None and retry_count < max_retries: + log.warning(f"Warning: output_file_id is None, retrying ({retry_count + 1}/{max_retries})...") + time.sleep(2) # Wait 2 seconds + batch = self.client.batches.retrieve(batch.id) + result_file_id = batch.output_file_id + retry_count += 1 + + # If still None after retries, raise error + if result_file_id is None: + log.error(f"ERROR: Batch {batch.id} marked as completed but output_file_id is None after {max_retries} retries") + log.error(f"Batch details: {batch}") + raise RuntimeError( + f"Batch {batch.id} completed but output_file_id was not populated after {max_retries} retries. " + f"Check batch error details: {getattr(batch, 'errors', 'No error info available')}" + ) + + result_content = self.client.files.content(result_file_id) + result_lines = result_content.text.strip().split('\n') + + # Parse results and match to original order by custom_id + results_dict = {} + for line in result_lines: + result = json.loads(line) + custom_id = result['custom_id'] + idx = int(custom_id.split('-')[1]) + + # Extract the response + if result.get('response'): + response_data = result['response']['body'] + # Parse the response similar to sync path + parsed_result = _extract_response_content( + response_data, + has_schema=bool(text_kwarg) + ) + results_dict[idx] = parsed_result + else: + # Handle errors + results_dict[idx] = None + + # Return results in original order + return [results_dict.get(i) for i in range(len(prompts))] + + elif batch.status == "failed": + raise RuntimeError(f"Batch processing failed: {batch}") + elif batch.status == "expired": + raise RuntimeError(f"Batch processing expired: {batch}") + else: + raise RuntimeError(f"Unexpected batch status: {batch.status}") + + finally: + # Clean up the temporary file + import os + if os.path.exists(batch_file_path): + os.remove(batch_file_path) + + def cache_repr(self): + """Return a string representation of this engine for caching purposes.""" + return self._cache_repr + +def _conform_to_openai_prompt_roles(prompts: list[Dict]) -> list[Dict]: + """Convert a dialog to a JSON-serialized prompt string. + + Converts DialogElement objects to plain dicts and, for the native + OpenAI API (non-vLLM), renames the "system" role to "developer" + per OpenAI's message role conventions. + + Sources: + 1) https://platform.openai.com/docs/guides/prompt-engineering#message-roles-and-instruction-following + 2) https://model-spec.openai.com/2025-02-12.html#definitions + + Args: + dialog: List of DialogElements or message dicts with "role" and "content" keys. + + Returns: + JSON-serialized prompt string consumable by ``run_inference``. + """ + for p in prompts: + if p["role"] == "system": + p["role"] = "developer" + return prompts + +def _response_format_field(schema: Optional[str]) -> Dict: + """ + Create response_format parameter for structured outputs. + Supported by: gpt-4o-mini, gpt-4o-2024-08-06 and later. + For older models like gpt-4, this will fail - use gpt-4o or gpt-4-turbo instead. + """ + if not schema: + return {} + else: + schema_dict = json.loads(schema) + _enforce_additional_properties_false(schema_dict) + text = { + "format": { + "type": "json_schema", + "name": "ITM_Schema", + "schema": schema_dict, + "strict": True + } + } + return {"text": text} + + +def _deserialize_prompts(prompts: Union[str, List[str]]) -> List[List[Dict]]: + """Normalize prompt input into a uniform list-of-message-lists format. + + Handles three input shapes: + 1. A single JSON string encoding one developer-user prompt pair. I.e. a DialogElement. + 2. A list of JSON strings encoding multiple prompt pairs. I.e. A Dialog with a multiple DialogElements. + 3. A single JSON string wrapped in a length-1 list. I.e. A Dialog with a single DialogElement. + + Args: + prompts: Raw prompt(s) as returned by ``dialog_to_prompt``. + + Returns: + A list where each element is a deserialized message list + (list of role/content dicts). + + Raises: + AssertionError: If ``prompts`` doesn't match any expected shape. + TypeError: If ``prompts`` has an entirely unexpected type. + """ + is_single_json_string = isinstance(prompts, str) + is_multiple_json_strings = isinstance(prompts, list) and len(prompts) > 1 and all([isinstance(p,str) for p in prompts]) + is_wrapped_single_json_string = isinstance(prompts, list) and len(prompts) == 1 and isinstance(prompts[0], str) + + assert is_single_json_string or is_multiple_json_strings or is_wrapped_single_json_string + + if is_single_json_string: + # Single developer-user prompt-pair; wrap it for uniformity + return [json.loads(prompts)] + elif is_multiple_json_strings or is_wrapped_single_json_string: + return [json.loads(p) for p in prompts] + else: + raise TypeError("Argument prompts had an unexpected type") + + +def _enforce_additional_properties_false(schema: dict) -> dict: + """Recursively set additionalProperties: false on all object types. + + OpenAI's strict structured output mode requires this on every object + in the schema. Schemas defined for local outlines inference often omit + it, so we normalize here rather than patching each template. + """ + if isinstance(schema, dict): + if schema.get("type") == "object": + schema["additionalProperties"] = False + for value in schema.values(): + if isinstance(value, dict): + _enforce_additional_properties_false(value) + elif isinstance(value, list): + for item in value: + if isinstance(item, dict): + _enforce_additional_properties_false(item) + return schema + + +def _extract_response_content(response_data: dict, has_schema: bool) -> Optional[Dict]: + """ + Extract and parse content from a response object. + + Args: + response_data: The response data dictionary + has_schema: Whether structured output was requested + + Returns: + Parsed content dictionary or None + """ + output = response_data.get('output', []) + if not output: + return None + + # Find the message output (not the reasoning) + message_output = None + for output_item in output: + if isinstance(output_item, dict) and output_item.get('type') == 'message': + message_output = output_item + break + + if not message_output or not message_output.get('content'): + return None + + # Get the text from the first content item + first_content = message_output['content'][0] + text_content = first_content.get('text') + + if text_content: + if has_schema: + # Parse as JSON for structured outputs + return json.loads(text_content) + else: + # Return as plain text for unstructured outputs + return {"response": text_content} \ No newline at end of file diff --git a/align_system/configs/experiment/openai_api/baseline.yaml b/align_system/configs/experiment/openai_api/baseline.yaml new file mode 100644 index 00000000..c1534afa --- /dev/null +++ b/align_system/configs/experiment/openai_api/baseline.yaml @@ -0,0 +1,36 @@ +# @package _global_ +defaults: + - override /adm: pipeline_baseline + - override /interface: ta3 + - override /inference_engine@adm.structured_inference_engine: openai_gpt5 + +interface: + session_type: adept + training_session: full + username: "testrun-pipeline_baseline" + domain: "p2triage" + +adm: + step_definitions: + outlines_baseline: + scenario_description_template: + _target_: align_system.prompt_engineering.outlines_prompts.Phase2ScenarioDescription + prompt_template: + _target_: align_system.prompt_engineering.outlines_prompts.Phase2BaselinePrompt + + enable_caching: true + + instance: + steps: + # Reference the step instances we want to use in order + - ${ref:adm.step_definitions.format_choices} + - ${ref:adm.step_definitions.outlines_baseline} + # - ${ref:adm.step_definitions.action_parameter_completion} + - ${ref:adm.step_definitions.ensure_chosen_action} + - ${ref:adm.step_definitions.populate_choice_info} + +driver: + apply_action_filtering: false + +force_determinism: true +align_to_target: false \ No newline at end of file diff --git a/align_system/configs/experiment/openai_api/comparative_regression.yaml b/align_system/configs/experiment/openai_api/comparative_regression.yaml new file mode 100644 index 00000000..5be48464 --- /dev/null +++ b/align_system/configs/experiment/openai_api/comparative_regression.yaml @@ -0,0 +1,34 @@ +# @package _global_ +defaults: + - override /adm: phase2_pipeline_fewshot_comparative_regression + - override /interface: ta3 + - override /adm_component/alignment@adm.step_definitions.scalar_alignment: random_effects_tuple + - override /inference_engine@adm.structured_inference_engine: openai_gpt5 + +interface: + session_type: adept + training_session: full + username: "testrun-pipeline_fewshot_comp_reg_loo" + domain: "p2triage" + +adm: + step_definitions: + regression_icl: + icl_generator_partial: + incontext_settings: + number: 20 + leave_one_out_strategy: 'scenario_description' # LOO - Remove for eval + datasets: + medical: /data/shared/samba/phase2_icl/Feb2026-MU-train_20251218.json + affiliation: /data/shared/samba/phase2_icl/Feb2026-AF-train_20251218.json + merit: /data/shared/samba/phase2_icl/Feb2026-MF-train_20251218.json + personal_safety: /data/shared/samba/phase2_icl/Feb2026-PS-train_20251218.json + search: /data/shared/samba/phase2_icl/Feb2026-SS-train_20251218.json + comparative_regression: + enable_caching: true + +driver: + apply_action_filtering: false + +force_determinism: true +align_to_target: true diff --git a/align_system/configs/experiment/openai_api/direct_regression_test.yaml b/align_system/configs/experiment/openai_api/direct_regression_test.yaml new file mode 100644 index 00000000..f610e5ad --- /dev/null +++ b/align_system/configs/experiment/openai_api/direct_regression_test.yaml @@ -0,0 +1,17 @@ +# @package _global_ +defaults: + - /alignment_target: "june2025/ADEPT-June2025-affiliation-1.0.yaml" + - override /adm: phase2_pipeline_direct_regression + - override /adm_component/alignment@adm.step_definitions.scalar_alignment: medical_urgency_weighted_scalar + - override /inference_engine@adm.structured_inference_engine: openai_gpt5 + - override /interface: input_output_file + +interface: + state_hydration_domain: "p2triage" + input_output_filepath: ${test_data_dir}/July2025-AF-train_20250804_timing_subsample.json + +driver: + apply_action_filtering: false + +force_determinism: true +align_to_target: true \ No newline at end of file diff --git a/align_system/configs/experiment/openai_api/full_train_run.yaml b/align_system/configs/experiment/openai_api/full_train_run.yaml new file mode 100644 index 00000000..e9557f7c --- /dev/null +++ b/align_system/configs/experiment/openai_api/full_train_run.yaml @@ -0,0 +1,23 @@ +# @package _global_ +defaults: + - override /adm: phase2_pipeline_direct_regression + - override /interface: ta3 + - override /adm_component/alignment@adm.step_definitions.scalar_alignment: random_effects_tuple + - override /inference_engine@adm.structured_inference_engine: openai_gpt5 + +interface: + session_type: adept + training_session: full + username: "testrun-pipeline_direct" + domain: "p2triage" + +adm: + step_definitions: + direct_regression: + enable_caching: true + +driver: + apply_action_filtering: false + +force_determinism: true +align_to_target: true \ No newline at end of file diff --git a/align_system/configs/inference_engine/openai_gpt4.yaml b/align_system/configs/inference_engine/openai_gpt4.yaml new file mode 100644 index 00000000..213d6737 --- /dev/null +++ b/align_system/configs/inference_engine/openai_gpt4.yaml @@ -0,0 +1,17 @@ +_target_: align_system.algorithms.openai_inference_engine.OpenAIInferenceEngine + +# https://github.com/openai/openai-python/blob/main/src/openai/_client.py#L99 +model_name: gpt-4o +temperature: 0.7 +top_p: 0.9 +max_tokens: 4096 + +# Optional kwargs +base_url: null # Set to null for OpenAI cloud +api_key: null # Reads from OPENAI_API_KEY env var if null +organization: null # Reads from OPENAI_ORG_ID env var if null +project: null # Reads from OPENAI_PROJECT_ID env var if null +webhook_secret: null # Reads from OPENAI_WEBHOOK_SECRET env var if null +timeout: "NOT_GIVEN" +# Optional unstable kwargs +_strict_response_validation: True \ No newline at end of file diff --git a/align_system/configs/inference_engine/openai_gpt5.yaml b/align_system/configs/inference_engine/openai_gpt5.yaml new file mode 100644 index 00000000..bfe45a96 --- /dev/null +++ b/align_system/configs/inference_engine/openai_gpt5.yaml @@ -0,0 +1,14 @@ +_target_: align_system.algorithms.openai_inference_engine.OpenAIInferenceEngine + +# https://github.com/openai/openai-python/blob/main/src/openai/_client.py#L99 +model_name: gpt-5.2 +temperature: 0.7 +top_p: 0.9 +max_tokens: 4096 + +# Optional kwargs +base_url: null # Set to null for OpenAI cloud +api_key: null # Reads from OPENAI_API_KEY env var if null +timeout: "NOT_GIVEN" +# Optional unstable kwargs +_strict_response_validation: True \ No newline at end of file diff --git a/align_system/configs/inference_engine/vllm_openai_llama3.yaml b/align_system/configs/inference_engine/vllm_openai_llama3.yaml new file mode 100644 index 00000000..4b8ac8c7 --- /dev/null +++ b/align_system/configs/inference_engine/vllm_openai_llama3.yaml @@ -0,0 +1,7 @@ +_target_: align_system.algorithms.openai_inference_engine.OpenAIInferenceEngine + +model_name: meta-llama/Llama-3.1-8B-Instruct +base_url: http://localhost:8000/v1 +temperature: 0.3 +top_p: 0.9 +max_tokens: 4096 \ No newline at end of file diff --git a/align_system/prompt_engineering/outlines_prompts.py b/align_system/prompt_engineering/outlines_prompts.py index 0e87f6a2..36a2cb57 100644 --- a/align_system/prompt_engineering/outlines_prompts.py +++ b/align_system/prompt_engineering/outlines_prompts.py @@ -1480,7 +1480,18 @@ def __call__(self, character, scenario_state): threat_unstructured = scenario_state['threat_state']['unstructured'] char_unstructured = character['unstructured'] - if m := re.match(f'{threat_unstructured}(.+){char_unstructured}', full_state_unstructured.replace("\n", " ")): + pattern = "{}(.+?){}".format( + threat_unstructured.replace("\n", " "), + char_unstructured.replace("\n", " ")) + + if m := re.match(pattern, full_state_unstructured.replace("\n", " ")): setup = m.group(1).strip() + else: + # FIXME: This case is needed specifically for + # multi-attribute targets (and single attribute scenarios) + # where we may need to run regression for Personal Safety + # on an Affiliation scenario (where the text structure is + # a bit different) + return f" - {char_unstructured}" return f"{setup}\n - {char_unstructured}" diff --git a/poetry.lock b/poetry.lock index 0729c9eb..290f1fc2 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,171 +1,282 @@ -# This file is automatically @generated by Poetry 2.1.3 and should not be changed by hand. +# This file is automatically @generated by Poetry 2.2.1 and should not be changed by hand. 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