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setup.py
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setup.py
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import setuptools
with open("README.md", "r") as fh:
long_description = fh.read()
setuptools.setup(
name='contact-hunter',
version='0.1.0',
python_requires=">=3.6.0",
author="Anna Kononkova",
author_email="[email protected]",
description="A tool to obtain significant Hi-C contacts for a particular set of loci",
packages=setuptools.find_packages(),
url="https://github.com/Khrameeva-Lab/contact-hunter",
long_description=long_description,
long_description_content_type="text/markdown",
classifiers=[
'Intended Audience :: Science/Research',
"Programming Language :: Python :: 3",
"License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
"Operating System :: OS Independent",
],
install_requires=['asciitree>=0.3.3',
'cached-property>=1.5.2',
'certifi>=2021.5.30',
'click>=8.0.4',
'cooler>=0.8.11',
'cycler>=0.11.0',
'cytoolz>=0.10.1',
'dill>=0.3.4',
'h5py>=3.1.0',
'importlib-metadata>=4.8.3',
'kiwisolver>=1.3.1',
'matplotlib>=3.3.4',
'multiprocess>=0.70.12.2',
'numpy>=1.19.5',
'pandas>=1.1.5',
'Pillow>=8.4.0',
'pyfaidx>=0.7.0',
'pypairix>=0.3.7',
'pyparsing>=3.0.9',
'python-dateutil>=2.8.2',
'pytz>=2022.1',
'PyYAML>=6.0',
'scipy>=1.5.4',
'simplejson>=3.17.6',
'six>=1.16.0',
'toolz>=0.11.2',
'typing_extensions>=4.1.1',
'zipp>=3.6.0'],
entry_points = {
'console_scripts': ['contact_hunter=contact_hunter.cli:main'],
}
)