Dockerfile

# This is the LSDTopoTools visualisation container
# It includes all the python packages needed to run LSDMappingTools

# Pull base image. We start from the miniconda imade
FROM conda/miniconda3
MAINTAINER Simon Mudd (simon.m.mudd@ed.ac.uk) and Fiona Clubb (clubb@uni-potsdam.de)

# Need this to shortcut the stupid tzdata noninteractive thing
ARG DEBIAN_FRONTEND=noninteractive

# Add a bunch of utilities that will be used to fetch data
RUN apt-get update && apt-get install -y \ 
    git \
    ffmpeg \
    wget \
    tzdata \ 
    zip \
    && rm -rf /var/lib/apt/lists/*    

# Add the conda forge
RUN conda config --add channels conda-forge

# Set the channel
RUN conda config --set channel_priority strict

# Update conda
RUN conda update -c conda-forge conda

# Now add some conda packages
RUN conda install -y -c conda-forge \
    python=3.6.7 numpy scipy \
    pandas=0.24.2 matplotlib \
    gdal geopandas shapely \
    fiona rasterio \
    pyproj cartopy \
    descartes utm

# Set the working directory
WORKDIR /LSDTopoTools

# Copy the startup script
COPY Start_LSDTT.sh /usr/local/bin/
RUN chmod +x /usr/local/bin/Start_LSDTT.sh

# Copy the script for fetching example data 
COPY Get_LSDTT_example_data.sh /usr/local/bin/
RUN chmod +x /usr/local/bin/Get_LSDTT_example_data.sh

# Copy the Liberation Sans fonts and activate them
RUN mkdir /usr/share/fonts/truetype/LiberationSans/
COPY ./LiberationSans/LiberationSans-Bold.ttf /usr/share/fonts/truetype/LiberationSans/
COPY ./LiberationSans/LiberationSans-BoldItalic.ttf /usr/share/fonts/truetype/LiberationSans/
COPY ./LiberationSans/LiberationSans-Italic.ttf /usr/share/fonts/truetype/LiberationSans/
COPY ./LiberationSans/LiberationSans-Regular.ttf /usr/share/fonts/truetype/LiberationSans/

RUN fc-cache -fv
RUN rm -fr ~/.cache/matplotlib