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Aged conditional coalescent #487

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walterxie opened this issue Jun 5, 2024 · 0 comments
Open

Aged conditional coalescent #487

walterxie opened this issue Jun 5, 2024 · 0 comments
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enhancement New feature or request

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@walterxie
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walterxie commented Jun 5, 2024 •
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Conditional coalescent on root age, it may take the PopulationFunction as input.

tree ~ AgedConditionalCoalescent( ... , ParametricDistribution);

  1. simulate 1000 trees from PopulationFunction;
  2. weight each tree by Pr(tree, age | ParametricDistribution), such as Pr(tree, age | meanlog, sdlog) for LogNormal;
  3. resample 1 tree proportional to there weights.
@walterxie walterxie added the enhancement New feature or request label Jun 5, 2024
@walterxie walterxie changed the title Conditional coalescent on root age Aged conditional coalescent Jun 5, 2024
@walterxie walterxie pinned this issue Jun 5, 2024
@walterxie walterxie mentioned this issue Oct 2, 2024
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