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C(n) = \langle \cos\theta_{i, i+n} \rangle =
\langle \mathbf{a_i} \cdot \mathbf{a_{i+n}} \rangle
where :math:`\mathbf{a}_i \text{ and } \mathbf{a}_{i+n}` are unit vectors
along the bonds. (Because for two vectors a and b,
:math:`\mathbf{a} \cdot \mathbf{b} = |\mathbf{a}| |\mathbf{b}| \cos{\alpha}`)
– see
`Wikipedia <https://en.wikipedia.org/wiki/Dot_product#Geometric_definition>`_.
The text was updated successfully, but these errors were encountered:
Persistent Length docs https://docs.mdanalysis.org/stable/documentation_pages/analysis/polymer.html
dont mention that ai and ai+n are unit vectors I think this can be a bit confusing for first time readers.
As discussed with https://discord.com/channels/807348386012987462/1021430544543785021/1334939337028272148
I am opening this issue to make the docs a bit more clear about this.
Describe the solution you'd like
Add this to the docs
.. math::
The text was updated successfully, but these errors were encountered: