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Set up within- and between-subjects statistical tests, alongside the correction for multiple comparison
Detailed Description
First, check the consistency of the effects at the trials/events (intra-subject level); second, the group-level (inter-subject) model followed by the permutation-based correction for the multiple comparison to identify the strength of the effects observed in the empirical SDI comparing against surrogate SDIs across and within subjects
Context / Motivation
Trials/events-level SDI needs to be looked into for its consistency before the group-level; this hierarchical stat model handles that
Possible Implementation
Set up the code for;
Make a distribution from the Empirical and Surrogate SDIs using Signed Rank
Perform one-sample ttest to test the SDI in the trials/events against null
Perform massive univariate tests among subjects, and subsequently correct for multiple comparisons using permutations
Reimplement the code for Scipy's signed rank test for natively including it in NiGSP
Run tests and reproduce the original results; checks out okay ?
Reimplement the code for MNE's ttest_1samp_no_p for native inclusion
Run tests and reproduce the original results; checks out okay ?
Figure out if reimplementing MNE-python's permutation_t_test is a viable option; EDIT: many local imports; making it all native make the code convoluted & hard to read and follow, better to keep mne as optional requirement for stats
Final tests pass ?
Moderate and quick refactoring the code
Polishing the docstring
Run and test locally
Automated tests
The text was updated successfully, but these errors were encountered:
Set up within- and between-subjects statistical tests, alongside the correction for multiple comparison
Detailed Description
First, check the consistency of the effects at the trials/events (intra-subject level); second, the group-level (inter-subject) model followed by the permutation-based correction for the multiple comparison to identify the strength of the effects observed in the empirical SDI comparing against surrogate SDIs across and within subjects
Context / Motivation
Trials/events-level SDI needs to be looked into for its consistency before the group-level; this hierarchical stat model handles that
Possible Implementation
Set up the code for;
ttest_1samp_no_p
for native inclusionpermutation_t_test
is a viable option; EDIT: many local imports; making it all native make the code convoluted & hard to read and follow, better to keep mne as optional requirement for statsThe text was updated successfully, but these errors were encountered: