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Kallisto parameters #187

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kchen96 opened this issue Mar 21, 2024 · 0 comments
Open

Kallisto parameters #187

kchen96 opened this issue Mar 21, 2024 · 0 comments

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@kchen96
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kchen96 commented Mar 21, 2024

Hi, I was using the Biojupies to quantify reads for a Quant-seq experiment. Since it uses single-end sequencing, users need to specify the average fragment size and standard deviation. I wonder what the pre-set parameters are for the Kallisto method?
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