runtime to minutes

MathiasEskildsen · MathiasEskildsen · commit d0f1689f99b6 · 2024-06-04T16:42:16.000+02:00
diff --git a/workflow/rules/06-relabel.smk b/workflow/rules/06-relabel.smk
@@ -9,7 +9,7 @@ rule relabel:
         1
     resources:
         mem_mb = 2048,
-        runtime = "01:00:00"
+        runtime = 60
     log:
         os.path.join(config['log_dir'], "relabel", "{sample}.log")
     shell:
diff --git a/workflow/rules/09-fix_otu_table.smk b/workflow/rules/09-fix_otu_table.smk
@@ -10,7 +10,7 @@ rule fix_otu_table_sintax:
         1
     resources:
         mem_mb = 1024,
-        runtime = "01:00:00"
+        runtime = 60
     conda:
         "../envs/generic.yml"
     log:

Original file line number	Diff line number	Diff line change
`@@ -9,7 +9,7 @@ rule relabel:`
`9`	`9`	`1`
`10`	`10`	`resources:`
`11`	`11`	`mem_mb = 2048,`
`12`		`- runtime = "01:00:00"`
	`12`	`+ runtime = 60`
`13`	`13`	`log:`
`14`	`14`	`os.path.join(config['log_dir'], "relabel", "{sample}.log")`
`15`	`15`	`shell:`