You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
{{ message }}
This repository has been archived by the owner on Aug 10, 2021. It is now read-only.
bji@/opt/local/Model-SEED-core$ ./bin/ms-config reload ./config/mySetting.conf
rm -f Source/.o Linux/mfatoolkit
make: ** No rule to make target Source/driver.o', needed byMFATOOLKIT'. Stop.
MFAToolkit compilation failed!
Model SEED Configuration Successful!
bji@dhcp-239-072/opt/local/Model-SEED-core$
It showed that the MFATOOLKIT compilation error. So how to solve it.
If it not solved, when we reconstruct the model using mdl-reconstruct, it will generate errors as following:
Creating problem directory: 1
Creating list of inactive reactions: /opt/local/Model-SEED-core/data/ReactionDB/MFAToolkitOutputFiles/1/InactiveModelReactions.txt
Printing gapfilling parameters in : /opt/local/Model-SEED-core/data/ReactionDB/MFAToolkitOutputFiles/1/CompleteGapfillingParameters.txt
Running runFBAStudy
Using problem directory: 1
Creating the model file: /opt/local/Model-SEED-core/data/ReactionDB/MFAToolkitOutputFiles/1/Seed416276.5.1.tbl
Creating biochemistry provenance files
Running FBA
Whoops! We encountered an unrecoverable error.
Could not find MFAToolkit executable
View error using the "ms-lasterror" command.
So how to fix it?
Thank you for help!
The text was updated successfully, but these errors were encountered:
bji@/opt/local/Model-SEED-core$ ./bin/ms-config reload ./config/mySetting.conf
rm -f Source/.o Linux/mfatoolkit
make: ** No rule to make target Source/driver.o', needed byMFATOOLKIT'. Stop.
MFAToolkit compilation failed!
Model SEED Configuration Successful!
bji@dhcp-239-072/opt/local/Model-SEED-core$
It showed that the MFATOOLKIT compilation error. So how to solve it.
If it not solved, when we reconstruct the model using mdl-reconstruct, it will generate errors as following:
Creating problem directory: 1
Creating list of inactive reactions: /opt/local/Model-SEED-core/data/ReactionDB/MFAToolkitOutputFiles/1/InactiveModelReactions.txt
Printing gapfilling parameters in : /opt/local/Model-SEED-core/data/ReactionDB/MFAToolkitOutputFiles/1/CompleteGapfillingParameters.txt
Running runFBAStudy
Using problem directory: 1
Creating the model file: /opt/local/Model-SEED-core/data/ReactionDB/MFAToolkitOutputFiles/1/Seed416276.5.1.tbl
Creating biochemistry provenance files
Running FBA
Whoops! We encountered an unrecoverable error.
Could not find MFAToolkit executable
View error using the "ms-lasterror" command.
So how to fix it?
Thank you for help!
—
Reply to this email directly or view it on GitHub.
Sign up for freeto subscribe to this conversation on GitHub.
Already have an account?
Sign in.
When I configure the configure file,
bji@/opt/local/Model-SEED-core$ ./bin/ms-config reload ./config/mySetting.conf
rm -f Source/.o Linux/mfatoolkit
make: ** No rule to make target
Source/driver.o', needed by
MFATOOLKIT'. Stop.MFAToolkit compilation failed!
Model SEED Configuration Successful!
bji@dhcp-239-072/opt/local/Model-SEED-core$
It showed that the MFATOOLKIT compilation error. So how to solve it.
If it not solved, when we reconstruct the model using mdl-reconstruct, it will generate errors as following:
Creating problem directory: 1
Creating list of inactive reactions: /opt/local/Model-SEED-core/data/ReactionDB/MFAToolkitOutputFiles/1/InactiveModelReactions.txt
Printing gapfilling parameters in : /opt/local/Model-SEED-core/data/ReactionDB/MFAToolkitOutputFiles/1/CompleteGapfillingParameters.txt
Running runFBAStudy
Using problem directory: 1
Creating the model file: /opt/local/Model-SEED-core/data/ReactionDB/MFAToolkitOutputFiles/1/Seed416276.5.1.tbl
Creating biochemistry provenance files
Running FBA
Whoops! We encountered an unrecoverable error.
Could not find MFAToolkit executable
View error using the "ms-lasterror" command.
So how to fix it?
Thank you for help!
The text was updated successfully, but these errors were encountered: