Skip to content

Commit 1871586

Browse files
updating readme
1 parent aea462d commit 1871586

File tree

1 file changed

+2
-2
lines changed

1 file changed

+2
-2
lines changed

README.md

+2-2
Original file line numberDiff line numberDiff line change
@@ -13,8 +13,9 @@
1313
[![GitHub forks](https://img.shields.io/github/forks/MouseLand/rastermap?style=social)](https://github.com/MouseLand/rastermap/)
1414

1515

16-
Rastermap is a discovery algorithm for neural data. The algorithm was written by Carsen Stringer and Marius Pachitariu. For support, please open an [issue](https://github.com/MouseLand/rastermap/issues). Please see install instructions [below](README.md/#Installation). Check out the [**paper**](https://www.nature.com/articles/s41593-024-01783-4) and the [**tutorial video**](https://youtu.be/oQHq7yUWn2k) for more info. If you use Rastermap or analysis code in this repo in your work, please cite the paper:
16+
Rastermap is a discovery algorithm for neural data. The algorithm was written by Carsen Stringer and Marius Pachitariu. For support, please open an [issue](https://github.com/MouseLand/rastermap/issues). Please see install instructions [below](README.md/#Installation). Check out the [**paper**](https://www.nature.com/articles/s41593-024-01783-4) and the [**tutorial video**](https://youtu.be/oQHq7yUWn2k) for more info. Rastermap runs in python 3.8+ and has a [**graphical user interface (GUI)**](#gui) for running it easily.
1717

18+
**If you use Rastermap or analysis code in this repo in your work, please cite the paper:**
1819
Stringer C., Zhong L., Syeda A., Du F., Kesa M., & Pachitariu M. (2024). Rastermap: a discovery method for neural population recordings. *Nature Neuroscience*. https://doi.org/10.1038/s41593-024-01783-4.
1920

2021
Table of Contents
@@ -39,7 +40,6 @@ Table of Contents
3940

4041
## Example notebooks
4142

42-
Rastermap runs in python 3.8+ and has a [**graphical user interface (GUI)**](#gui) for running it easily. Rastermap can also be run in a jupyter notebook locally or on google colab, see these demos:
4343
* [rastermap_largescale.ipynb](notebooks/rastermap_largescale.ipynb) [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/MouseLand/rastermap/blob/main/notebooks/rastermap_largescale.ipynb) shows how to use it with large-scale data from mouse cortex (> 200 neurons)
4444
* [rastermap_singleneurons.ipynb](notebooks/rastermap_singleneurons.ipynb) [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/MouseLand/rastermap/blob/main/notebooks/rastermap_singleneurons.ipynb) shows how to use it with small to medium sized data (< 200 neurons), in this case recorded from rat hippocampus
4545
* [rastermap_zebrafish.ipynb](notebooks/rastermap_zebrafish.ipynb) [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/MouseLand/rastermap/blob/main/notebooks/rastermap_zebrafish.ipynb) shows how to use it with large-scale data from zebrafish

0 commit comments

Comments
 (0)