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Benfeitas
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fix path in notebook
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session_gsa/GEM_GSA.Rmd

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@@ -130,7 +130,7 @@ library(org.Hs.eg.db)
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`r sn<-sn+1; paste0(sn,"\\. ")` Specify the location of the main tutorial directory
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```{r}
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main_dir = '/Users/jonrob/Documents/NBIS/teaching/workshop_omics_integration/session_gems'
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main_dir = './session_gsa'
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```
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</br>

session_gsa/GEM_GSA.html

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@@ -6798,7 +6798,7 @@ <h1>Setup</h1>
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library(org.Hs.eg.db)</code></pre>
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<p></br></p>
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<p>4. Specify the location of the main tutorial directory</p>
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<pre class="r"><code>main_dir = &#39;/Users/jonrob/Documents/NBIS/teaching/workshop_omics_integration/session_gems&#39;</code></pre>
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<pre class="r"><code>main_dir = &#39;./session_gsa&#39;</code></pre>
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<p></br></p>
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<p>5. Create a <code>TCGA_data/</code> subdirectory within <code>data/</code> (if it does not yet exist)</p>
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<pre class="r"><code>tcga_dir &lt;- file.path(main_dir, &#39;data&#39;, &#39;TCGA_data&#39;)

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