import function bug

[SeverusYixin]

Hi @haesleinhuepf, after directly importing your code, with:

from generate_link_lists import read_yaml_file, load_dataframe
from _github_utilities import get_github_repository

it shows me as:

C:\Users\huang\Documents\GitHub\training\scripts>streamlit run appsubmitter.py

You can now view your Streamlit app in your browser.

Local URL: http://localhost:8501
Network URL: http://172.26.44.166:8501

Adding nfdi4bioimage.yml
Adding nfdi4bioimage.yml
2024-09-04 13:10:58.472 Uncaught app exception
Traceback (most recent call last):
File "C:\Users\huang\AppData\Local\Programs\Python\Python312\Lib\site-packages\streamlit\runtime\scriptrunner\exec_code.py", line 85, in exec_func_with_error_handling
result = func()
^^^^^^
File "C:\Users\huang\AppData\Local\Programs\Python\Python312\Lib\site-packages\streamlit\runtime\scriptrunner\script_runner.py", line 576, in code_to_exec
exec(code, module.dict)
File "C:\Users\huang\Documents\GitHub\training\scripts\appsubmitter.py", line 120, in
unique_tags, unique_types, unique_licenses = get_unique_values_from_yamls(directory_path)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\huang\Documents\GitHub\training\scripts\appsubmitter.py", line 44, in get_unique_values_from_yamls
df = load_dataframe(resources_dir)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\huang\Documents\GitHub\training\scripts\generate_link_lists.py", line 102, in load_dataframe
content = all_content(directory_path)
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\huang\Documents\GitHub\training\scripts\generate_link_lists.py", line 92, in all_content
new_content = read_yaml_file(directory_path + filename)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\huang\Documents\GitHub\training\scripts\generate_link_lists.py", line 120, in read_yaml_file
with open(filename, 'r', encoding="utf8") as file:
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
FileNotFoundError: [Errno 2] No such file or directory: '..\resourcesnfdi4bioimage.yml'
2024-09-04 13:10:58.472 Uncaught app exception
Traceback (most recent call last):
File "C:\Users\huang\AppData\Local\Programs\Python\Python312\Lib\site-packages\streamlit\runtime\scriptrunner\exec_code.py", line 85, in exec_func_with_error_handling
result = func()
^^^^^^
File "C:\Users\huang\AppData\Local\Programs\Python\Python312\Lib\site-packages\streamlit\runtime\scriptrunner\script_runner.py", line 576, in code_to_exec
exec(code, module.dict)
File "C:\Users\huang\Documents\GitHub\training\scripts\appsubmitter.py", line 120, in
unique_tags, unique_types, unique_licenses = get_unique_values_from_yamls(directory_path)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\huang\Documents\GitHub\training\scripts\appsubmitter.py", line 44, in get_unique_values_from_yamls
df = load_dataframe(resources_dir)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\huang\Documents\GitHub\training\scripts\generate_link_lists.py", line 102, in load_dataframe
content = all_content(directory_path)
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\huang\Documents\GitHub\training\scripts\generate_link_lists.py", line 92, in all_content
new_content = read_yaml_file(directory_path + filename)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\huang\Documents\GitHub\training\scripts\generate_link_lists.py", line 120, in read_yaml_file
with open(filename, 'r', encoding="utf8") as file:
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
FileNotFoundError: [Errno 2] No such file or directory: '..\resourcesnfdi4bioimage.yml'

[SeverusYixin]

maybe with os.path.join()?

[haesleinhuepf]

Did you try this?

[SeverusYixin]

no, because that's need to change the code in "generate_link_lists.py".

[haesleinhuepf]

Changing files is a normal thing. Give it a try.

[SeverusYixin]

ok, that's more easy that I can update it 👍

[haesleinhuepf]

Are there any news on this @SeverusYixin ?

[SeverusYixin]

Hi @haesleinhuepf, this one also finished.

[haesleinhuepf]

True!
Done in #128