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vibso-edit.owl
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vibso-edit.owl
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Prefix(:=<http://purl.obolibrary.org/obo/vibso.owl#>)
Prefix(ex:=<https://example.instances/>)
Prefix(DOI:=<http://doi.org/>)
Prefix(ROR:=<http://ror.org/>)
Prefix(dce:=<http://purl.org/dc/elements/1.1/>)
Prefix(obo:=<http://purl.obolibrary.org/obo/>)
Prefix(owl:=<http://www.w3.org/2002/07/owl#>)
Prefix(rdf:=<http://www.w3.org/1999/02/22-rdf-syntax-ns#>)
Prefix(xml:=<http://www.w3.org/XML/1998/namespace>)
Prefix(xsd:=<http://www.w3.org/2001/XMLSchema#>)
Prefix(prov:=<http://www.w3.org/ns/prov#>)
Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
Prefix(skos:=<http://www.w3.org/2004/02/skos/core#>)
Prefix(ORCID:=<http://orcid.org/>)
Prefix(schema:=<http://schema.org/>)
Prefix(dcterms:=<http://purl.org/dc/terms/>)
Prefix(wikipedia:=<https://en.wikipedia.org/wiki/>)
Ontology(<http://purl.obolibrary.org/obo/vibso.owl>
Import(<http://purl.obolibrary.org/obo/vibso/components/vibso_classes.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/components/vibso_examples.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/components/vibso_object_properties.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/imports/bfo_import.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/imports/chebi_import.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/imports/chmo_import.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/imports/foodon_import.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/imports/iao_import.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/imports/obi_import.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/imports/omo_import.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/imports/pato_import.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/imports/ro_import.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/imports/stato_import.owl>)
Import(<http://purl.obolibrary.org/obo/vibso/imports/uo_import.owl>)
Annotation(dcterms:contributor <https://orcid.org/0000-0001-7694-5519>)
Annotation(dcterms:contributor <https://orcid.org/0000-0002-1595-3213>)
Annotation(dcterms:contributor <https://orcid.org/0000-0002-2239-3955>)
Annotation(dcterms:contributor <https://orcid.org/0000-0002-4378-6061>)
Annotation(dcterms:creator <https://www.wikidata.org/wiki/Q96678459>)
Annotation(dcterms:creator "VIBSO Workgroup"@en)
Annotation(dcterms:description "_WIP - NOT READY FOR PRODUCTION_ The Vibration Spectroscopy Ontology (VIBSO) is used to represent information regarding the excution and analysis of vibrational spectroscopy assays.")
Annotation(dcterms:license <https://creativecommons.org/licenses/by/4.0/>)
Annotation(dcterms:title "Vibrational Spectroscopy Ontology")
Declaration(NamedIndividual(ex:AssayObjective_O))
Declaration(NamedIndividual(ex:Assay_A))
Declaration(NamedIndividual(ex:DataItem_D))
Declaration(NamedIndividual(ex:EvaluantRole_R))
Declaration(NamedIndividual(ex:MaterialEntity_M))
Declaration(NamedIndividual(<https://orcid.org/0000-0001-7694-5519>))
Declaration(NamedIndividual(<https://orcid.org/0000-0002-1595-3213>))
Declaration(NamedIndividual(<https://orcid.org/0000-0002-2239-3955>))
Declaration(NamedIndividual(<https://orcid.org/0000-0002-4378-6061>))
Declaration(NamedIndividual(<https://ror.org/04aj4c181>))
Declaration(NamedIndividual(<https://ror.org/05r3f7h03>))
Declaration(NamedIndividual(<https://www.wikidata.org/wiki/Q96678459>))
Declaration(AnnotationProperty(dcterms:contributor))
Declaration(AnnotationProperty(dcterms:creator))
Declaration(AnnotationProperty(dcterms:description))
Declaration(AnnotationProperty(dcterms:license))
Declaration(AnnotationProperty(dcterms:title))
Declaration(AnnotationProperty(<https://schema.org/affiliation>))
############################
# Annotation Properties
############################
# Annotation Property: dcterms:contributor (contributor)
AnnotationAssertion(rdfs:label dcterms:contributor "contributor")
# Annotation Property: dcterms:creator (creator)
AnnotationAssertion(rdfs:label dcterms:creator "creator")
# Annotation Property: dcterms:description (description)
AnnotationAssertion(rdfs:label dcterms:description "description")
# Annotation Property: dcterms:license (license)
AnnotationAssertion(rdfs:label dcterms:license "license")
# Annotation Property: dcterms:title (title)
AnnotationAssertion(rdfs:label dcterms:title "title")
############################
# Classes
############################
# Class: obo:CHEBI_24431 (chemical entity)
SubClassOf(obo:CHEBI_24431 obo:BFO_0000040)
# Class: obo:CHMO_0000056 (Raman microscopy)
EquivalentClasses(Annotation(rdfs:comment "Equivalence asserted manually in VIBSO based on the textual definition of this class.") Annotation(rdfs:isDefinedBy obo:vibso.owl) obo:CHMO_0000056 ObjectIntersectionOf(obo:CHMO_0000102 obo:CHMO_0000656))
# Class: obo:CHMO_0000067 (microscopy)
EquivalentClasses(Annotation(rdfs:comment "Equivalence asserted manually in VIBSO based on the definitions of both classes.") Annotation(rdfs:isDefinedBy obo:vibso.owl) obo:CHMO_0000067 obo:OBI_0002119)
# Class: obo:CHMO_0000581 (microspectroscopy)
EquivalentClasses(Annotation(rdfs:comment "Equivalence asserted manually in VIBSO based on the textual definition of this class.") Annotation(rdfs:isDefinedBy obo:vibso.owl) obo:CHMO_0000581 ObjectIntersectionOf(obo:CHMO_0000102 obo:CHMO_0000228))
# Class: obo:NCBITaxon_9606 (Homo sapiens)
AnnotationAssertion(rdfs:label obo:NCBITaxon_9606 "person")
# Class: obo:UO_0000001 (length unit)
SubClassOf(obo:UO_0000001 obo:IAO_0000003)
# Class: obo:UO_0000002 (mass unit)
SubClassOf(obo:UO_0000002 obo:IAO_0000003)
# Class: obo:UO_0000051 (concentration unit)
SubClassOf(obo:UO_0000051 obo:IAO_0000003)
############################
# Named Individuals
############################
# Individual: ex:AssayObjective_O (ex:AssayObjective_O)
ClassAssertion(obo:OBI_0000441 ex:AssayObjective_O)
# Individual: ex:Assay_A (ex:Assay_A)
AnnotationAssertion(dce:description ex:Assay_A "The assay A is planned to produce as a specified output the data item D which is a specific kind of information about the material entity M, which has the evaluant role R that gets realized in this planned observation process.
This example instance is part of the ontology to demonstrate the OBI assay pattern. The type and number of relations between this instance and other example instances are based on the subclassOf and equivalentTo axioms asserted on OBI's assay."@en)
ClassAssertion(obo:OBI_0000070 ex:Assay_A)
ObjectPropertyAssertion(obo:BFO_0000055 ex:Assay_A ex:EvaluantRole_R)
ObjectPropertyAssertion(obo:OBI_0000293 ex:Assay_A ex:MaterialEntity_M)
ObjectPropertyAssertion(obo:OBI_0000299 ex:Assay_A ex:DataItem_D)
ObjectPropertyAssertion(obo:OBI_0000417 ex:Assay_A ex:AssayObjective_O)
# Individual: ex:DataItem_D (ex:DataItem_D)
ClassAssertion(obo:IAO_0000027 ex:DataItem_D)
ObjectPropertyAssertion(obo:IAO_0000136 ex:DataItem_D ex:MaterialEntity_M)
# Individual: ex:EvaluantRole_R (ex:EvaluantRole_R)
ClassAssertion(obo:BFO_0000023 ex:EvaluantRole_R)
# Individual: ex:MaterialEntity_M (ex:MaterialEntity_M)
ClassAssertion(obo:BFO_0000040 ex:MaterialEntity_M)
ObjectPropertyAssertion(obo:RO_0000087 ex:MaterialEntity_M ex:EvaluantRole_R)
# Individual: <https://orcid.org/0000-0001-7694-5519> (Rainer Stosch)
AnnotationAssertion(rdfs:label <https://orcid.org/0000-0001-7694-5519> "Rainer Stosch")
AnnotationAssertion(<https://schema.org/affiliation> <https://orcid.org/0000-0001-7694-5519> <https://ror.org/05r3f7h03>)
AnnotationAssertion(<https://schema.org/affiliation> <https://orcid.org/0000-0001-7694-5519> <https://www.wikidata.org/wiki/Q96678459>)
AnnotationAssertion(<https://schema.org/affiliation> <https://orcid.org/0000-0001-7694-5519> "VIBSO Working Group"@en)
ClassAssertion(obo:NCBITaxon_9606 <https://orcid.org/0000-0001-7694-5519>)
# Individual: <https://orcid.org/0000-0002-1595-3213> (Philip Strömert)
AnnotationAssertion(rdfs:label <https://orcid.org/0000-0002-1595-3213> "Philip Strömert")
AnnotationAssertion(<https://schema.org/affiliation> <https://orcid.org/0000-0002-1595-3213> <https://ror.org/04aj4c181>)
AnnotationAssertion(<https://schema.org/affiliation> <https://orcid.org/0000-0002-1595-3213> <https://www.wikidata.org/wiki/Q96678459>)
AnnotationAssertion(<https://schema.org/affiliation> <https://orcid.org/0000-0002-1595-3213> "VIBSO Working Group"@en)
ClassAssertion(obo:NCBITaxon_9606 <https://orcid.org/0000-0002-1595-3213>)
# Individual: <https://orcid.org/0000-0002-2239-3955> (Giacomo Lanza)
AnnotationAssertion(rdfs:label <https://orcid.org/0000-0002-2239-3955> "Giacomo Lanza")
AnnotationAssertion(<https://schema.org/affiliation> <https://orcid.org/0000-0002-2239-3955> <https://ror.org/05r3f7h03>)
AnnotationAssertion(<https://schema.org/affiliation> <https://orcid.org/0000-0002-2239-3955> <https://www.wikidata.org/wiki/Q96678459>)
AnnotationAssertion(<https://schema.org/affiliation> <https://orcid.org/0000-0002-2239-3955> "VIBSO Working Group"@en)
ClassAssertion(obo:NCBITaxon_9606 <https://orcid.org/0000-0002-2239-3955>)
# Individual: <https://orcid.org/0000-0002-4378-6061> (Johannes Hunold)
AnnotationAssertion(rdfs:label <https://orcid.org/0000-0002-4378-6061> "Johannes Hunold")
AnnotationAssertion(<https://schema.org/affiliation> <https://orcid.org/0000-0002-4378-6061> <https://ror.org/04aj4c181>)
AnnotationAssertion(<https://schema.org/affiliation> <https://orcid.org/0000-0002-4378-6061> <https://www.wikidata.org/wiki/Q96678459>)
AnnotationAssertion(<https://schema.org/affiliation> <https://orcid.org/0000-0002-4378-6061> "VIBSO Working Group"@en)
ClassAssertion(obo:NCBITaxon_9606 <https://orcid.org/0000-0002-4378-6061>)
# Individual: <https://ror.org/04aj4c181> (Technische Informationsbibliothek (TIB))
AnnotationAssertion(rdfs:label <https://ror.org/04aj4c181> "German National Library of Science and Technology Hannover"@en)
AnnotationAssertion(rdfs:label <https://ror.org/04aj4c181> "Technische Informationsbibliothek (TIB)"@de)
ClassAssertion(obo:OBI_0000245 <https://ror.org/04aj4c181>)
# Individual: <https://ror.org/05r3f7h03> (German National Metrology Institute)
AnnotationAssertion(rdfs:label <https://ror.org/05r3f7h03> "German National Metrology Institute"@en)
AnnotationAssertion(rdfs:label <https://ror.org/05r3f7h03> "Physikalisch-Technische Bundesanstalt (PTB)"@de)
ClassAssertion(obo:OBI_0000245 <https://ror.org/05r3f7h03>)
# Individual: <https://www.wikidata.org/wiki/Q96678459> (NFDI4Chem)
AnnotationAssertion(rdfs:label <https://www.wikidata.org/wiki/Q96678459> "NFDI4Chem")
SubClassOf(ObjectSomeValuesFrom(obo:BFO_0000051 ObjectIntersectionOf(obo:IAO_0000140 ObjectSomeValuesFrom(obo:OBI_0000295 obo:OBI_0000070) ObjectSomeValuesFrom(obo:RO_0002566 ObjectSomeValuesFrom(obo:RO_0000080 ObjectIntersectionOf(obo:OBI_0000968 ObjectSomeValuesFrom(obo:OBI_0000295 obo:OBI_0000070)))))) obo:OBI_0001896)
)