Merge pull request #51 from NOC-MSM/50-fix-error-in-5d-output-xml-fil…

…e-add-vertical-diffusivities-as-comments 50 fix error in 5d output xml file add vertical diffusivities as comments
NOC-MSM · Dec 9, 2024 · 0f4617f · 0f4617f
2 parents d6a6107 + d975f93
commit 0f4617f
Show file tree

Hide file tree

Showing 2 changed files with 10 additions and 3 deletions.
diff --git a/cfgs/GLOBAL_QCO/eORCA025/context_nemo.xml b/cfgs/GLOBAL_QCO/eORCA025/context_nemo.xml
@@ -25,11 +25,11 @@
 
 <!-- Files definition -->
     <file_definition src="file_def_nemo-oce_1d_C6.xml"/>     <!--  NEMO ocean dynamics                     -->
-<!--    <file_definition src="file_def_nemo-oce_5d_C6.xml"/>     <!--  NEMO ocean dynamics                     -->
+    <file_definition src="file_def_nemo-oce_5d_C6.xml"/>     <!--  NEMO ocean dynamics                     -->
     <file_definition src="file_def_nemo-oce_1m_C6.xml"/>     <!--  NEMO ocean dynamics                     -->
     <file_definition src="file_def_nemo-oce_1y_C6.xml"/>     <!--  NEMO ocean dynamics                     -->
 
-<!--    <file_definition src="./file_def_nemo-ice_5d_C6.xml"/>   <!--  NEMO ocean sea ice                      -->
+    <file_definition src="./file_def_nemo-ice_5d_C6.xml"/>   <!--  NEMO ocean sea ice                      -->
     <file_definition src="./file_def_nemo-ice_1m_C6.xml"/>   <!--  NEMO ocean sea ice                      -->
     <file_definition src="./file_def_nemo-ice_1y_C6.xml"/>   <!--  NEMO ocean sea ice                      -->
 

diff --git a/cfgs/SHARED/file_def_nemo-oce_5d_C6.xml b/cfgs/SHARED/file_def_nemo-oce_5d_C6.xml
@@ -110,8 +110,8 @@
           <field field_ref="strd_tot_li"     name="osalttend"       unit="kg/m2/s" />
           <field field_ref="strd_bbl_li"     name="strd_bbl_li"                    />
           <field field_ref="strd_atf_li"     name="strd_atf_li"                    />
-	</file>
   -->
+	</file>
 
 	<file id="file5" mode="write" writer="u5dwriter" gatherer="ugatherer" using_server2="true" name_suffix="_grid_U" description="ocean U grid variables" >
           <field field_ref="e3u"             name="e3u"     standard_name="cell_thickness" />
@@ -148,6 +148,13 @@
 
 	<file id="file7" mode="write" writer="w5dwriter" gatherer="tgatherer" using_server2="true" name_suffix="_grid_W" description="ocean W grid variables" >
           <field field_ref="e3w"             name="e3w"      standard_name="cell_thickness" />
+          <!-- vertical diffusivities diagnostics
+	        <field field_ref="avt"             name="difvho"   standard_name="ocean_vertical_heat_diffusivity" />
+	        <field field_ref="avs"             name="difvso"   standard_name="ocean_vertical_salt_diffusivity" />                 
+          <field field_ref="avm"             name="difvmo"   standard_name="ocean_vertical_momentum_diffusivity" />
+          <field field_ref="avt_evd"         name="avt_evd"  standard_name="enhanced_vertical_heat_diffusivity" />
+          <field field_ref="av_tmx"          name="diftrto"  standard_name="ocean_vertical_tracer_diffusivity_due_to_tides" />
+          -->
           <field field_ref="w_masstr"        name="wmo" />
 	        <field field_ref="woce"            name="wo"       standard_name="upward_sea_water_velocity" long_name="W" />
           <field field_ref="woce"            name="w2o"      standard_name="square_of_upward_sea_water_velocity" long_name="WW"  operation="average" > woce * woce </field>