diff --git a/cfgs/GLOBAL_QCO_MEDUSA/eORCA1/namelist_medusa_cfg b/cfgs/GLOBAL_QCO_MEDUSA/eORCA1/namelist_medusa_cfg index 69a02a3..2b5a06c 100644 --- a/cfgs/GLOBAL_QCO_MEDUSA/eORCA1/namelist_medusa_cfg +++ b/cfgs/GLOBAL_QCO_MEDUSA/eORCA1/namelist_medusa_cfg @@ -1,13 +1,17 @@ &nammsa_ctl ln_msa_carbchem = .true. !! activates Carbone cycle ln_msa_avgqsr = .true. !! biology sees daily avg light - ln_msa_ccd = .false. !! ?? - check + ln_msa_ccd = .false. !! reads ccd file to init ccd field. ln_msa_preico2 = .false. !! atm co2 forced at pre-ind level + ln_msa_ukesm_cpl = .false. !! activate coupling in MEDUSA with UKESM. ln_msa_omipdic = .false. !! 2 dic pre-ind and date-related ln_msa_zmp = .false. !! switch to Tom's Oithona + 2 very fast detritus ln_msa_noco2flux = .false. !! debug - cut sea-air co2 fluxes ln_msa_debug = .false. !! add lots of debug print statements ln_msa_nancheck = .false. !! checks if any nans in bio 3D fields + ln_msa_check_n_fix = .false. !! check and exceptionally fix crazy + !! values for DIC, ALK, T, and S. + !! avoids carb chem crashes ln_msa_kill_medusa = .false. !! debug - no bio sources and sinks ln_msa_no_detsink = .false. !! debug - poc don't sink / @@ -30,7 +34,7 @@ !___________!_________________________!___________________!___________!_____________!________!___________!__________________!__________!_______________! ! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask ! ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename ! - sn_dust = 'mahowald.eORCA025_4.2.nc' , -1 , 'dust' , .true. , .true. , 'yearly' , '' , '' , '' + sn_dust = 'mahowald.orca100_ext_nh.nc' , -1 , 'dust' , .true. , .true. , 'yearly' , '' , '' , '' / &nammsa_river ln_read_rivn = .true. @@ -46,9 +50,9 @@ !___________!_________________________!___________________!___________!_____________!________!___________!__________________!__________!_______________! ! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask ! ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename ! - sn_riv_n = 'river42_tot_N_flux_LS200km_SP10_5ITER_ORCA025.nc' , -12 , 'RIV_N' , .true. , .true. , 'yearly' , '' , '' , '' - sn_riv_s = 'river42_tot_Si_flux_LS200km_SP10_5ITER_ORCA025.nc' , -12 , 'RIV_Si' , .true. , .true. , 'yearly' , '' , '' , '' - sn_riv_c = 'river42_total_DIC_flux_LS200km_SP10_5ITER_ALIGN_ORCA025.nc', -12 , 'RIV_C' , .true. , .true. , 'yearly' , '' , '' , '' - sn_riv_a = 'river42_total_ALK_flux_LS200km_SP10_5ITER_ALIGN_ORCA025.nc', -12 , 'RIV_ALK' , .true. , .true. , 'yearly' , '' , '' , '' + sn_riv_n = 'river_total_N_flux_IT03_SP10_eORCA100.nc' , -12 , 'RIV_N' , .false. , .true. , 'yearly' , '' , '' , '' + sn_riv_s = 'river_inorg_Si_flux_IT03_SP10_eORCA100.nc' , -12 , 'RIV_SI' , .false. , .true. , 'yearly' , '' , '' , '' + sn_riv_c = 'river_total_DIC_flux_IT03_SP10_OBfix_eORCA100.nc' , -12 , 'RIV_C' , .false. , .true. , 'yearly' , '' , '' , '' + sn_riv_a = 'river_total_ALK_flux_IT03_SP10_OBfix_eORCA100.nc' , -12 , 'RIV_ALK' , .false. , .true. , 'yearly' , '' , '' , '' / diff --git a/cfgs/GLOBAL_QCO_MEDUSA/eORCA1/namelist_top_cfg b/cfgs/GLOBAL_QCO_MEDUSA/eORCA1/namelist_top_cfg index 7400734..af2d287 100644 --- a/cfgs/GLOBAL_QCO_MEDUSA/eORCA1/namelist_top_cfg +++ b/cfgs/GLOBAL_QCO_MEDUSA/eORCA1/namelist_top_cfg @@ -46,12 +46,12 @@ ! ! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! - sn_trcdta(7) = 'eORCA025_v4.2_DIN.nc' , -12 , 'DIN' , .false. , .true. , 'yearly' , '', '' , '' - sn_trcdta(8) = 'eORCA025_v4.2_SIL.nc' , -12 , 'SIL' , .false. , .true. , 'yearly' , '', '' , '' - sn_trcdta(9) = 'eORCA025_v4.2_FER.nc' , -12 , 'FER' , .false. , .true. , 'yearly' , '', '' , '' - sn_trcdta(13) = 'eORCA025_v4.2_DIC.nc' , -12 , 'DIC' , .false. , .true. , 'yearly' , '', '' , '' - sn_trcdta(14) = 'eORCA025_v4.2_ALK.nc' , -12 , 'ALK' , .false. , .true. , 'yearly' , '', '' , '' - sn_trcdta(15) = 'eORCA025_v4.2_OXY.nc' , -12 , 'OXY' , .false. , .true. , 'yearly' , '', '' , '' + sn_trcdta(7) = 'NPD_ORCA1_MEDUSA_INIT.nc' , -12 , 'TRNDIN' , .false. , .true. , 'yearly' , '', '' , '' + sn_trcdta(8) = 'NPD_ORCA1_MEDUSA_INIT.nc' , -12 , 'TRNSIL' , .false. , .true. , 'yearly' , '', '' , '' + sn_trcdta(9) = 'NPD_ORCA1_MEDUSA_INIT.nc' , -12 , 'TRNFER' , .false. , .true. , 'yearly' , '', '' , '' + sn_trcdta(13) = 'NPD_ORCA1_MEDUSA_INIT.nc' , -12 , 'TRNDiC' , .false. , .true. , 'yearly' , '', '' , '' + sn_trcdta(14) = 'NPD_ORCA1_MEDUSA_INIT.nc' , -12 , 'TRNALK' , .false. , .true. , 'yearly' , '', '' , '' + sn_trcdta(15) = 'NPD_ORCA1_MEDUSA_INIT.nc' , -12 , 'TRNOXY' , .false. , .true. , 'yearly' , '', '' , '' ! cn_dir = './INPUT/INIT_MEDUSA/' ! root directory for the location of the data files rn_trfac(7) = 1.0 ! multiplicative factor diff --git a/data/INPUT_eORCA1_Anemone/INIT_MEDUSA b/data/INPUT_eORCA1_Anemone/INIT_MEDUSA new file mode 120000 index 0000000..a5bb7b3 --- /dev/null +++ b/data/INPUT_eORCA1_Anemone/INIT_MEDUSA @@ -0,0 +1 @@ +/dssgfs01/scratch/jpp1m13/ANCIL4.2/ORCA1/FILES/ \ No newline at end of file