diff --git a/Changelog b/Changelog index b912c118..b724ec09 100644 --- a/Changelog +++ b/Changelog @@ -5,13 +5,12 @@ ### Changed - Updated the TMT-Integrator to match with the version v4.0.0 - Updated the pickedFDR filter -- Replaced the cRAP contaminant database with the Universal Protein Contaminants from Frankenfield et al. (10.1021/acs.jproteome.2c00145) - The pipeline command now accepts annotation files with prefixes - Updated PTMProphet to the latest release -- Updated the database fecth with the new UniProt API (The new API is still unstable, people might experience hicups with certain cases, specially non-model organisms without reviewed sequences) +- Updated the database fetch with the new UniProt API (The new API is still unstable, people might experience hicups with certain cases, specially non-model organisms without reviewed sequences) ### Fixed - Contaminant tags are now added to Human sequences as well - Several minor fixes and updates - Added a fix to fix errorrs causes by division-by-zero errors (PR by @chhh) -- Fixed the protein coverage calculations to take into acount all peptides \ No newline at end of file +- Fixed the protein coverage calculations to take into account all peptides \ No newline at end of file diff --git a/README.md b/README.md index 2d07ab7a..64cbce86 100644 --- a/README.md +++ b/README.md @@ -3,7 +3,7 @@

[![Release](https://img.shields.io/github/release/nesvilab/philosopher.svg?color=purple&style=for-the-badge)](https://github.com/Nesvilab/philosopher/releases/latest) -![Golang](https://img.shields.io/badge/Go-1.18.2-blue.svg?style=for-the-badge) +![Golang](https://img.shields.io/badge/Go-1.19.3-blue.svg?style=for-the-badge) [![Go Report Card](https://goreportcard.com/badge/github.com/Nesvilab/philosopher?style=for-the-badge&color=red&logo=appveyor)](https://goreportcard.com/report/github.com/Nesvilab/philosopher) ![GitHub](https://img.shields.io/github/license/Nesvilab/philosopher?style=for-the-badge) ![](https://img.shields.io/github/downloads/Nesvilab/philosopher/total.svg?color=red&style=for-the-badge)