From 73a4b2a1e23be205c8125a01b12fa6cc7f689bc9 Mon Sep 17 00:00:00 2001
From: GitHub Actions <action@github.com>
Date: Fri, 20 Sep 2024 12:19:36 +0000
Subject: [PATCH] Add updated ref genome data and offline mode zip

---
 public/data/REFS.json           |   2 +-
 viralwasm-consensus-offline.zip | Bin 13130806 -> 13130809 bytes
 2 files changed, 1 insertion(+), 1 deletion(-)

diff --git a/public/data/REFS.json b/public/data/REFS.json
index 54ba2fc..9239105 100644
--- a/public/data/REFS.json
+++ b/public/data/REFS.json
@@ -1 +1 @@
-{"NC_009825": {"name": "HCV genotype 4", "shortname": ["hcv4"]}, "NC_014372": {"name": "Tai Forest Virus (Tai Forest ebolavirus, Cote d'Ivoire ebolavirus)", "shortname": ["taiforest", "taiforestvirus", "taiforestebola", "taiforestebolavirus", "cotedivoire", "cotedivoirevirus", "cotedivoireebola", "cotedivoireebolavirus"]}, "NC_004102": {"name": "HCV genotype 1", "shortname": ["hcv1"]}, "NC_006432": {"name": "Sudan Virus (Sudan ebolavirus)", "shortname": ["sudan", "sudanvirus", "sudanebola", "sudanebolavirus"]}, "NC_002549": {"name": "Ebola Virus (Zaire ebolavirus)", "shortname": ["ebola", "ebolavirus", "zaire", "zaireebola", "zaireebolavirus"]}, "NC_001498": {"name": "Measles Virus (Measles morbillivirus)", "shortname": ["measles", "measlesvirus", "measlesmorbillivirus"]}, "NC_001722": {"name": "HIV-2", "shortname": ["hiv2"]}, "NC_045512": {"name": "SARS-CoV-2 (COVID-19)", "shortname": ["sc2", "sarscov2", "covid", "covid19"]}, "NC_002640": {"name": "Dengue Virus 4", "shortname": ["denv4", "dengue4", "denguevirus4"]}, "NC_009827": {"name": "HCV genotype 6", "shortname": ["hcv6"]}, "NC_038882": {"name": "HCV genotpye 1 (isolate H77)", "shortname": ["hcv1h77"]}, "NC_004162": {"name": "Chikungunya Virus", "shortname": ["chikv", "chikungunya", "chikungunyavirus"]}, "NC_001802": {"name": "HIV-1", "shortname": ["hiv1"]}, "NC_039345": {"name": "Bombali Virus (Bombali ebolavirus)", "shortname": ["bombali", "bombalivirus"]}, "NC_009823": {"name": "HCV genotype 2", "shortname": ["hcv2"]}, "NC_004161": {"name": "Reston Virus (Reston ebolavirus)", "shortname": ["reston", "restonvirus", "restonebola", "restonebolavirus"]}, "NC_001475": {"name": "Dengue Virus 3", "shortname": ["denv3", "dengue3", "denguevirus3"]}, "NC_014373": {"name": "Bundibugyo Virus (Bundibugyo ebolavirus)", "shortname": ["bundibugyo", "bundibugyovirus"]}, "NC_009824": {"name": "HCV genotype 3", "shortname": ["hcv3"]}, "NC_009826": {"name": "HCV genotype 5", "shortname": ["hcv5"]}, "NC_063383": {"name": "Mpox Virus", "shortname": ["mpox", "mpoxvirus", "monkeypox", "monkeypoxvirus"]}, "NC_030791": {"name": "HCV genotype 7", "shortname": ["hcv7"]}, "NC_001474": {"name": "Dengue Virus 2", "shortname": ["denv2", "dengue2", "denguevirus2"]}, "NC_001477": {"name": "Dengue Virus 1", "shortname": ["denv1", "dengue1", "denguevirus1"]}}
\ No newline at end of file
+{"NC_001498": {"name": "Measles Virus (Measles morbillivirus)", "shortname": ["measles", "measlesvirus", "measlesmorbillivirus"]}, "NC_039345": {"name": "Bombali Virus (Bombali ebolavirus)", "shortname": ["bombali", "bombalivirus"]}, "NC_009826": {"name": "HCV genotype 5", "shortname": ["hcv5"]}, "NC_001474": {"name": "Dengue Virus 2", "shortname": ["denv2", "dengue2", "denguevirus2"]}, "NC_009824": {"name": "HCV genotype 3", "shortname": ["hcv3"]}, "NC_009827": {"name": "HCV genotype 6", "shortname": ["hcv6"]}, "NC_045512": {"name": "SARS-CoV-2 (COVID-19)", "shortname": ["sc2", "sarscov2", "covid", "covid19"]}, "NC_063383": {"name": "Mpox Virus", "shortname": ["mpox", "mpoxvirus", "monkeypox", "monkeypoxvirus"]}, "NC_001802": {"name": "HIV-1", "shortname": ["hiv1"]}, "NC_004162": {"name": "Chikungunya Virus", "shortname": ["chikv", "chikungunya", "chikungunyavirus"]}, "NC_004102": {"name": "HCV genotype 1", "shortname": ["hcv1"]}, "NC_006432": {"name": "Sudan Virus (Sudan ebolavirus)", "shortname": ["sudan", "sudanvirus", "sudanebola", "sudanebolavirus"]}, "NC_004161": {"name": "Reston Virus (Reston ebolavirus)", "shortname": ["reston", "restonvirus", "restonebola", "restonebolavirus"]}, "NC_030791": {"name": "HCV genotype 7", "shortname": ["hcv7"]}, "NC_002549": {"name": "Ebola Virus (Zaire ebolavirus)", "shortname": ["ebola", "ebolavirus", "zaire", "zaireebola", "zaireebolavirus"]}, "NC_001722": {"name": "HIV-2", "shortname": ["hiv2"]}, "NC_002640": {"name": "Dengue Virus 4", "shortname": ["denv4", "dengue4", "denguevirus4"]}, "NC_009825": {"name": "HCV genotype 4", "shortname": ["hcv4"]}, "NC_014373": {"name": "Bundibugyo Virus (Bundibugyo ebolavirus)", "shortname": ["bundibugyo", "bundibugyovirus"]}, "NC_014372": {"name": "Tai Forest Virus (Tai Forest ebolavirus, Cote d'Ivoire ebolavirus)", "shortname": ["taiforest", "taiforestvirus", "taiforestebola", "taiforestebolavirus", "cotedivoire", "cotedivoirevirus", "cotedivoireebola", "cotedivoireebolavirus"]}, "NC_001477": {"name": "Dengue Virus 1", "shortname": ["denv1", "dengue1", "denguevirus1"]}, "NC_009823": {"name": "HCV genotype 2", "shortname": ["hcv2"]}, "NC_038882": {"name": "HCV genotpye 1 (isolate H77)", "shortname": ["hcv1h77"]}, "NC_001475": {"name": "Dengue Virus 3", "shortname": ["denv3", "dengue3", "denguevirus3"]}}
\ No newline at end of file
diff --git a/viralwasm-consensus-offline.zip b/viralwasm-consensus-offline.zip
index c1b1f0237117e53da532dee8fd681e8133dab133..7fd4bf0e37eaedff42e7e4d43698269793b2988b 100644
GIT binary patch
delta 12187
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