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Processing of dbNSFP #57

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davidjakubosky opened this issue Dec 13, 2024 · 0 comments
Open

Processing of dbNSFP #57

davidjakubosky opened this issue Dec 13, 2024 · 0 comments

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@davidjakubosky
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Hi, thanks for this amazing resource and codebase!

I was curious about your processing of dbNSPFP - described in your README as shown below - these notebooks don't seem to be in the repo (or I just can't find them) - could anyone point me to them?

For clinical baselines, we used dbNSFP 4.4a as detailed in the manuscript appendix (and in proteingym/clinical_benchmark_notebooks/clinical_subs_processing.ipynb).

Best wishes,
David

@davidjakubosky davidjakubosky changed the title Processing of DBNSFp Processing of dbNSFP Dec 13, 2024
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