Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

TODO to support sensitivity studies #123

Open
1 of 3 tasks
sjdaines opened this issue May 5, 2024 · 0 comments
Open
1 of 3 tasks

TODO to support sensitivity studies #123

sjdaines opened this issue May 5, 2024 · 0 comments

Comments

@sjdaines
Copy link
Member

sjdaines commented May 5, 2024

Will also need changes to PALEOmodel

This will require three groups of changes:

  • Reaction parameters (Addressed by Add ParameterAggregator (for parameter sensitivity studies) #118)

    • define a subset of parameters set from the SciML p vector that override values in yaml file.
    • changes to dispatch to merge in modified parameters during dispatch
    • some changes to PALEOmodel to aggregate these into a Vector and calculate Jacobians etc
  • Constant Variables (currently initialised via attributes)

    • provide some way of defining which constant variables are considered modifiable for sensitivity studies
    • a method to change values in all data array sets in modeldata (when AD hence additional data arrays in use)
    • might be easiest to provide a new reaction that defines a non-constant variable with value set from a parameter, so that machinery can be reused?
  • Initial values for state variables

    • probably needs changes to PALEOmodel to make it convenient to change these
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant