[ENH] Update docker image (#409)

* add back fabber, update codecov * switch to --citeproc * Try newer version of codecov orb. * Add GPG fix. * Try bumping orb version. * Update .circleci/config.yml * Update .circleci/config.yml --------- Co-authored-by: Taylor Salo <[email protected]> Co-authored-by: Taylor Salo <[email protected]>
PennLINC · May 7, 2024 · b2112bb · b2112bb
1 parent 5b37756
commit b2112bb
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Showing 4 changed files with 4 additions and 5 deletions.
diff --git a/.circleci/config.yml b/.circleci/config.yml
@@ -4,7 +4,7 @@ orbs:
 
 .dockersetup: &dockersetup
   docker:
-    - image: pennlinc/aslprep_build:0.0.7
+    - image: pennlinc/aslprep_build:0.0.11
   working_directory: /src/aslprep
 
 runinstall: &runinstall

diff --git a/Dockerfile b/Dockerfile
@@ -1,4 +1,4 @@
-FROM pennlinc/aslprep_build:0.0.7
+FROM pennlinc/aslprep_build:0.0.11
 
 # Install aslprep
 COPY . /src/aslprep

diff --git a/aslprep/cli/workflow.py b/aslprep/cli/workflow.py
@@ -158,8 +158,7 @@ def build_boilerplate(config_file, workflow):
             "-s",
             "--bibliography",
             str(load_data("boilerplate.bib")),
-            "--filter",
-            "pandoc-citeproc",
+            "--citeproc",
             "--metadata",
             'pagetitle="ASLPrep citation boilerplate"',
             str(citation_files["md"]),

diff --git a/pyproject.toml b/pyproject.toml
@@ -177,7 +177,7 @@ markers = [
 ]
 
 [tool.coverage.run]
-branch = true
+branch = false
 omit = [
     "*/tests/*",
     "*/__init__.py",