diff --git a/aslprep/workflows/asl/outputs.py b/aslprep/workflows/asl/outputs.py index 3d8c41766..3ba3d0890 100644 --- a/aslprep/workflows/asl/outputs.py +++ b/aslprep/workflows/asl/outputs.py @@ -69,6 +69,7 @@ def init_asl_derivatives_wf( "asl_native", "asl_t1", "asl_std", + "asl_cifti", "aslref_native", "aslref_t1", "aslref_std", @@ -76,41 +77,52 @@ def init_asl_derivatives_wf( "asl_mask_t1", "asl_mask_std", # Transforms + "hmc_xforms", "aslref_to_anat_xfm", "anat_to_aslref_xfm", # Standard CBF outputs "cbf_ts_native", "cbf_ts_t1", "cbf_ts_std", + "cbf_ts_cifti", "mean_cbf_native", "mean_cbf_t1", "mean_cbf_std", + "mean_cbf_cifti", "att_native", "att_t1", "att_std", + "att_cifti", # SCORE/SCRUB outputs "cbf_ts_score_native", "cbf_ts_score_t1", "cbf_ts_score_std", + "cbf_ts_score_cifti", "mean_cbf_score_native", "mean_cbf_score_t1", "mean_cbf_score_std", + "mean_cbf_score_cifti", "mean_cbf_scrub_native", "mean_cbf_scrub_t1", "mean_cbf_scrub_std", + "mean_cbf_scrub_cifti", # BASIL outputs "mean_cbf_basil_native", "mean_cbf_basil_t1", "mean_cbf_basil_std", + "mean_cbf_basil_cifti", "mean_cbf_gm_basil_native", "mean_cbf_gm_basil_t1", "mean_cbf_gm_basil_std", + "mean_cbf_gm_basil_cifti", "mean_cbf_wm_basil_native", "mean_cbf_wm_basil_t1", "mean_cbf_wm_basil_std", + "mean_cbf_wm_basil_cifti", "att_basil_native", "att_basil_t1", "att_basil_std", + "att_basil_cifti", # Parcellated CBF outputs "atlas_names", "mean_cbf_parcellated", @@ -118,9 +130,15 @@ def init_asl_derivatives_wf( "mean_cbf_scrub_parcellated", "mean_cbf_basil_parcellated", "mean_cbf_gm_basil_parcellated", - # non-GE outputs + # Non-GE outputs "confounds", "confounds_metadata", + # CIFTI-related outputs + "cifti_metadata", + "cifti_density", + "goodvoxels_mask", + "surf_files", + "surf_refs", ], ), name="inputnode",