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change.log
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V0.7.0
- Stay only sample size, power and randomization. Other functions moved to another packages.
- Change licance.
v0.6.2
- Minor fix
- Deps
v0.6.1
- bugfix in AUMCtau when dosetime != 0
- fix ⊆ for Dict
- fix setelimrange!(data::DataSet{PKSubject}, range::ElimRange, sort::Dict)
- fix start kel value in output
- dropbeforedosetime - drop NanN
- nca!(data::DataSet{PKSubject}) - sort keyword
- pk optimization
- pk output changes
- pkplots changes and fixes
- fix log-scale plots
- other minor fixes
v0.6.0
- changes in PK parameters names
- nca! administration settings
- adjust kel range for nca! with adm = :iv
- MRTtauinf used for Vsstau calculation
- changes in plots
- descriptive, CI add
- export fix
- DataSet sort!
- documentation
- nca tests
v0.5.1
- DataFrames 1
- SpecialFunctions 1
v0.5.0
- StableRNGs test+
- rng keyword for randomtable, randomseq
- auc_sparse for PKSubject
v0.4.1
- cox samplen
- datatable
- printdesigns
v0.4.0
- remove DataFrames interim
- minor fix
v0.3.2
- bugfix fisher test
- add show
- propci for ConTab
- bump dependencies
v0.3.1
- deleteat! fix
- simulation crush fix
- Equivalence Hypothesis alpha level fix!
v0.3.0 (removed)
- #44 , #45 , #46
- update test
- Move alpha from CTask to Hypothesis
- besim method for bioequivalence simulation
- checkhyp changed for simulations methods
- minor changes in text output
- theo test dataset; theo :luld AUClast test
- TaskResult changes: field result -> res, t.result returns t.res[:result]
- simulation hypothesis generalization
- minor changes in power formulas: predict negative power
- simulation bug: fix Equivalence checkhyp
- pval: experimental function
- changes in Show
- documenting
- code cosmetics
v0.2.7
- setkelauto!
- getkelauto
- applyelimrange!
- getval improove
- Mean CI fix
- code fix
- experimental tests
- DataSet{Descriptive} show changes
- improove coverage
- test update
v0.2.6
- findfirst
- Documents update
- export applyncarule!
- code cleaning
- improve coverage
- plots kwargs
- Proportion meta-analysis
- Tests restruct
- Hypothesis test for simulation
- Deps update
- Docs
v0.2.5
- SpecialFunctions 0.10
- RecipesBase 0.8
v0.2.4
- PK: drop observation before dosetime
- Roots Version 1.0
- Distributions 23.0
- Remove Probability struct
- Update Proportion struct
- Type simplification for composite means/proportions for CTask
- PK Validation: basic tests completed
- LimitRule keywords
- Output changes
- Fix
- Cox sample size: initial
- McNemar CI: initial
- Cosmetics
v0.2.3
- ConTab struct
- Urine PK
- NCA Tau PK partial areas fix
- NCA test update
- Plotting improve
- minor fix
v0.2.2
- Distributions bump
- cvfromci cvms deprecated
- cmh methods
- Plots for PK with RecipesBase
- NCA Ctau intrapolation/extrapolation fix and validate
- fisher & pirson non-public methods for frequencies
- add Show methods
- minor fix
- add sim
- cosmetics
v0.2.1
- error message for besamplen
- cvfromci new method
- pooledcv new method
- minor fix
- cosmetics
v0.2.0
Breaking changes(!):
- Renamed exported functions: ctsamplen, ctpower, besamplen, bepower, ets (now in lower case).
- nca() -> nca!() - renamed;
- Changes in ctsamplen() in one group estimation. In version 0.1.x test mean/proportion denoted as parameter/keyword "a" was a "Reference".
This situation was inconsistent with two group analysis where "a" - T, "b" - R. Now everywhere "a" means "Test group", "b" means "Reference group".
Hypothesis testing for difference is A-B everywhere.
- Keyword "logdiff" removed in ctsamplen(), because this was inconsistent with bepower/besamplen, new parameter logscale using instead.
- Keyword "out" removed everywhere. Output via Base.show(io::IO, obj::TaskResult);
- twoProp(), oneProp(), oneMean. twoMeans() removed;
- No submodule politics.
Major changes:
- using DataFrames 19.0+
- Task types for many functions (sample size, power functions, random ets.);
- Sample size and power functions now return TaskResult{T <: CTask};
- descriptive() rewrited;
- DataSet type;
- make DataFrame from DataSet;
- Descriptive type;
- CMH CI split;
- randomtable() return DF
- Include CI in ClinicalTrialUtilities & StatsBase methods for AbstractParameter types.
Other changes:
- Changes in error messages. Now throw(ArgumentError(msg));
- LimitRule for PK;
- RMIN/RMAX/TH/BL for PD;
- Steady-state PK and other PK parameters;
- Descriptive stats add SES and SEK;
- Descriptive performance;
- Test procedures restructured;
- 4x4 design;
- Documentation;
- Minor changes, bugfix, code cleaning, cosmetics.
v0.1.16
- Split PK/PD
- New PD param
- Column dictionary
v0.1.15
- Add RR CI Katz Test
- Julian function names (part)
- Rename descriptives -> descriptive
- export freque, contab
- minor changes, bugfix, code cleaning
v0.1.14
- Add compat to Project.toml
- Julian function names (part)
- descriptive_!() -> descriptive_()
- randomtable() included and add test
v0.1.13
- MN DIFF CI optimization
- Index for ConfInt
- Change test tolerance
- Check alpha for CI
- descriptives() - type fix
- freque() - add test
- contab() - initial commit + test
- Randomization - initial commit (alpha)
- Pharmacodinamic for nca() - baseline & threshold AUC, Time
- Add test data
- Minor changes
v0.1.12
- add MOVER OR CI
- add MN RR CI
- MN OR - change algo, for old algo use :mn2
- MN Diff - code optimization
- Mee|FM Diff- code optimization
- Code cleaning and cosmetics
- add tests and testdata
- HTML Export function
- Frequency initial commit - alpha
v0.1.11
- nca hotfix
- add test
- descriptives()
- html export - initial, not final
- StatsBase, Statistics in deps
- change documenting
- add test
- code cosmetics and fix
v0.1.10
- add Cochran–Mantel–Haenszel confidence intervals
- add documentation and comments
- improve coverage
- add tests
- code cosmetics
v0.1.9
- add PK module
- pooledCV
- add DataFrames to dependencies
- Simulation unification
- logdiff set false by default in ctSampleN, ctPower
- README.md update and fix
v0.1.8
- bugfix (meanNormCI, text output)
- wald ci include
- add test
- move ConfInt to main module
- ci2cv
- new designs in designProp
v1.0.7
Add sub-module CI for confidence interval computation as part of simulation functions SIM.
- add Roots in dependencies for mee/fm score ci calc
- add Random in dependencies for simulations
- remove struct with sampleSize wrapper
- change name sampleSize -> ctSampleN
- change name powerTOST -> bePower
- change all tokens from string to symol
- add sd2cv function
- add cv2sd function
- add ms2cv function
- add cv2ms function
- add SIM submodule
- add bePower function
- add ctBinPower function
- add CI submodule
- oneProp
- twoProp
- oneMean
- twoMeans
- PowerTOST optimizations
- add test procedure
- ClinicalTrialUtilities.jl reconfigure
- add documentation
v1.0.6
Robust functions: sampleSize, ctPower, powerTOST, beSampleN
Canges:
- SampleSize add McNM test;
- SampleSize add text output;
- ctPower add McNM test;
- ctPower add text output;
- powerTOST add designs: parallel, 2x2x4, 2x4x4, 2x2x3, 2x3x3
- beSampleN add designs: parallel, 2x2x4, 2x4x4, 2x2x3, 2x3x3
- beSampleN add text output
- owensQ add solution for a!=0
- optimizations
- bugfix, code cosmetics and minor changes
- Add documentation
- Add tests