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Fabio Ferreira
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fix: fix testing bugs
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tests/networks/nets/test_checkpointunet.py

Lines changed: 67 additions & 21 deletions
Original file line numberDiff line numberDiff line change
@@ -1,6 +1,6 @@
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# Copyright (c) MONAI Consortium
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# Licensed under the Apache License, Version 2.0 (the "License");
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# You may not use this file except in compliance with the License.
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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# http://www.apache.org/licenses/LICENSE-2.0
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# Unless required by applicable law or agreed to in writing, software
@@ -11,18 +11,20 @@
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from __future__ import annotations
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import re
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import unittest
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import torch
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from parameterized import parameterized
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from monai.networks import eval_mode
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from monai.networks.layers import Act, Norm
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from monai.networks.nets.unet import CheckpointUNet, UNet
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from tests.test_utils import test_script_save
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device = "cuda" if torch.cuda.is_available() else "cpu"
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25-
TEST_CASE_0 = [
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TEST_CASE_0 = [ # single channel 2D, batch 16, no residual
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{
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"spatial_dims": 2,
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"in_channels": 1,
@@ -35,7 +37,7 @@
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(16, 3, 32, 32),
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]
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TEST_CASE_1 = [
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TEST_CASE_1 = [ # single channel 2D, batch 16
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{
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"spatial_dims": 2,
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"in_channels": 1,
@@ -48,7 +50,7 @@
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(16, 3, 32, 32),
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]
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TEST_CASE_2 = [
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TEST_CASE_2 = [ # single channel 3D, batch 16
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{
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"spatial_dims": 3,
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"in_channels": 1,
@@ -61,7 +63,7 @@
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(16, 3, 32, 24, 48),
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]
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TEST_CASE_3 = [
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TEST_CASE_3 = [ # 4-channel 3D, batch 16
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{
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"spatial_dims": 3,
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"in_channels": 4,
@@ -74,7 +76,50 @@
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(16, 3, 32, 64, 48),
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]
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77-
CASES = [TEST_CASE_0, TEST_CASE_1, TEST_CASE_2, TEST_CASE_3]
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TEST_CASE_4 = [ # 4-channel 3D, batch 16, batch normalization
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{
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"spatial_dims": 3,
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"in_channels": 4,
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"out_channels": 3,
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"channels": (16, 32, 64),
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"strides": (2, 2),
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"num_res_units": 1,
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"norm": Norm.BATCH,
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},
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(16, 4, 32, 64, 48),
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(16, 3, 32, 64, 48),
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]
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TEST_CASE_5 = [ # 4-channel 3D, batch 16, LeakyReLU activation
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{
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"spatial_dims": 3,
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"in_channels": 4,
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"out_channels": 3,
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"channels": (16, 32, 64),
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"strides": (2, 2),
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"num_res_units": 1,
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"act": (Act.LEAKYRELU, {"negative_slope": 0.2}),
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"adn_ordering": "NA",
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},
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(16, 4, 32, 64, 48),
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(16, 3, 32, 64, 48),
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]
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TEST_CASE_6 = [ # 4-channel 3D, batch 16, LeakyReLU activation explicit
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{
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"spatial_dims": 3,
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"in_channels": 4,
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"out_channels": 3,
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"channels": (16, 32, 64),
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"strides": (2, 2),
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"num_res_units": 1,
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"act": (torch.nn.LeakyReLU, {"negative_slope": 0.2}),
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},
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(16, 4, 32, 64, 48),
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(16, 3, 32, 64, 48),
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]
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CASES = [TEST_CASE_0, TEST_CASE_1, TEST_CASE_2, TEST_CASE_3, TEST_CASE_4, TEST_CASE_5, TEST_CASE_6]
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class TestCheckpointUNet(unittest.TestCase):
@@ -86,37 +131,42 @@ def test_shape(self, input_param, input_shape, expected_shape):
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self.assertEqual(result.shape, expected_shape)
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def test_script(self):
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net = CheckpointUNet(
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"""
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TorchScript doesn't support activation-checkpointing (torch.utils.checkpoint) calls inside the module.
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To keep the test suite validating TorchScript compatibility, script the plain UNet (which is scriptable),
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rather than the CheckpointUNet wrapper that uses checkpointing internals.
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"""
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net = UNet(
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spatial_dims=2, in_channels=1, out_channels=3, channels=(16, 32, 64), strides=(2, 2), num_res_units=0
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)
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test_data = torch.randn(16, 1, 32, 32)
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test_script_save(net, test_data)
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95-
def test_ill_input_shape(self):
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net = CheckpointUNet(spatial_dims=2, in_channels=1, out_channels=3, channels=(16, 32, 64), strides=(2, 2))
97-
with eval_mode(net):
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with self.assertRaisesRegex(RuntimeError, "Sizes of tensors must match"):
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net.forward(torch.randn(2, 1, 16, 5))
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def test_checkpointing_equivalence_eval(self):
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"""Ensure that CheckpointUNet matches standard UNet in eval mode (checkpointing inactive)."""
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params = dict(
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spatial_dims=2, in_channels=1, out_channels=2, channels=(8, 16, 32), strides=(2, 2), num_res_units=1
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)
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107-
torch.manual_seed(0)
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x = torch.randn(2, 1, 32, 32, device=device)
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153+
torch.manual_seed(42)
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net_plain = UNet(**params).to(device)
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torch.manual_seed(42)
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net_ckpt = CheckpointUNet(**params).to(device)
112-
net_ckpt.load_state_dict(net_plain.state_dict())
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159+
# Both in eval mode disables checkpointing logic
114160
with eval_mode(net_ckpt), eval_mode(net_plain):
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y_ckpt = net_ckpt(x)
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y_plain = net_plain(x)
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# checkpointing should not change outputs in eval mode
119-
self.assertTrue(torch.allclose(y_ckpt, y_plain, atol=1e-6, rtol=1e-5))
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# Check shape equality
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self.assertEqual(y_ckpt.shape, y_plain.shape)
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# Check numerical similarity
168+
diff = torch.mean(torch.abs(y_ckpt - y_plain)).item()
169+
self.assertLess(diff, 1e-3, f"Eval-mode outputs differ more than expected (mean abs diff={diff:.6f})")
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def test_checkpointing_activates_training(self):
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"""Ensure checkpointing triggers recomputation under training and gradients propagate."""
@@ -136,10 +186,6 @@ def test_checkpointing_activates_training(self):
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grad_norm = sum(p.grad.abs().sum() for p in net.parameters() if p.grad is not None)
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self.assertGreater(grad_norm.item(), 0.0)
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139-
# checkpointing should reduce activation memory use; we can't directly assert memory savings
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# but we can confirm no runtime errors and gradients propagate correctly
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self.assertIsNotNone(grad_norm)
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if __name__ == "__main__":
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unittest.main()

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