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docs: update brats classes description (#8246)
Resolves #8225. ### Description Updated brats18 classes description. ### Types of changes <!--- Put an `x` in all the boxes that apply, and remove the not applicable items --> - [x] Non-breaking change (fix or new feature that would not break existing functionality). - [ ] Breaking change (fix or new feature that would cause existing functionality to change). - [ ] New tests added to cover the changes. - [x] Integration tests passed locally by running `./runtests.sh -f -u --net --coverage`. - [x] Quick tests passed locally by running `./runtests.sh --quick --unittests --disttests`. - [x] In-line docstrings updated. - [x] Documentation updated, tested `make html` command in the `docs/` folder. Signed-off-by: Vladislav Tumko <[email protected]> Co-authored-by: YunLiu <[email protected]>
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monai/transforms/utility/array.py

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@@ -1054,12 +1054,11 @@ def __call__(
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class ConvertToMultiChannelBasedOnBratsClasses(Transform):
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"""
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Convert labels to multi channels based on brats18 classes:
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label 1 is the necrotic and non-enhancing tumor core
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label 2 is the peritumoral edema
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label 4 is the GD-enhancing tumor
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The possible classes are TC (Tumor core), WT (Whole tumor)
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and ET (Enhancing tumor).
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Convert labels to multi channels based on `brats18 <https://www.med.upenn.edu/sbia/brats2018/data.html>`_ classes,
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which include TC (Tumor core), WT (Whole tumor) and ET (Enhancing tumor):
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label 1 is the necrotic and non-enhancing tumor core, which should be counted under TC and WT subregion,
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label 2 is the peritumoral edema, which is counted only under WT subregion,
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label 4 is the GD-enhancing tumor, which should be counted under ET, TC, WT subregions.
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"""
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backend = [TransformBackends.TORCH, TransformBackends.NUMPY]

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